Danio rerio (zebrafish): 568734
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Entry
568734 CDS
T01004
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
568734 (trim16)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
568734 (trim16)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
568734 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
CC_BshC
COG6_N
Motif
Other DBs
NCBI-GeneID:
568734
NCBI-ProteinID:
NP_001315091
ZFIN:
ZDB-GENE-090512-6
Ensembl:
ENSDARG00000010673
UniProt:
A0A8M1P9M9
LinkDB
All DBs
Position
12:48797379..48842118
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AA seq
589 aa
AA seq
DB search
MSAMVLTAELPACSMTSEIPKEEKIEENRPKYTEVEDKKIQVNGSPPEKHTEGEKDVKTI
EESKIQKDLKEIEVNKESKDPQKDDEDDEEEEEEVLGPDVVTCDSCIDKPCRAKKSCLTC
LVSYCESHLRPHLENAKFQSHRLVDPLRDIERRTCEAHRSPLELYCCMCCLCPACVTEEH
LGHQALPIAEARRNIEKELQDKQTEMLKTMTAAENAINKLQVNTVSIEGSVQEVRAVMEE
QFSILQAAVEQVKRDVCELLEAEERQALRQADGIRVHLEQRCAELKKTQSRVQKISKNKH
DIHFLQEYSEWKKEAVDVSLPGVYIGLVDRLQAFSHVIVRSTNRMCDNLHSSYTNKLKDT
CKNDNVGIKTTVFAVMAAKKNMMLPDPKTRDDFLQYVTPLSLDANTAHVFLRLTEECKKV
TNTTPWQHSYPDLPERFQDFKQVLTQESFYLGRHYFEVDMKGEGTHVGLTYKSIDRKGSQ
SNSCIAGNNFSWCLQWNGRSFSAWHSDVETPLSCPKTTHIGIYVDYSGGLLAFYDVENGM
TLIHKYQAEFLEPLYPAFWLPKKENVVLLEPGAASPLSSPSPSPDASTK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatggtgctgacagctgagctgccagcatgcagtatgacttctgaaataccc
aaagaggagaaaatagaggagaacaggccaaaatacacagaggtggaggataagaagatt
caggtgaatggatctcctccagaaaaacacaccgaaggagaaaaagacgtgaagaccatt
gaagaaagcaagattcagaaagacctcaaggagattgaggtaaataaggagtctaaagat
cctcagaaagatgatgaagatgatgaggaggaggaggaggaggttttggggccagatgtg
gtcacctgtgactcctgcatcgataagccgtgccgagctaaaaagtcttgcctcacctgt
ctggtgtcgtactgcgagtctcacctgaggccacatctggagaatgccaagttccagagc
cacaggttggtggatcctctgcgggacattgagaggcggacctgtgaagctcaccgcagc
ccgctggagctctactgctgcatgtgctgcctctgcccagcctgcgtcacagaggagcac
ctcggacaccaagccctgcccatagccgaggcgcgcaggaatatagagaaagagcttcag
gacaagcagacagaaatgctgaagacgatgacggccgcagaaaacgccattaacaagctg
caggtcaacactgtgtctatagagggctcagtgcaggaggtgcgggctgtgatggaggag
cagttcagtatcctgcaggccgcagtggagcaggtgaagcgggatgtgtgtgagctgctg
gaggcggaggagcggcaggcgctgcggcaggccgatggcatacgggtgcatctggagcag
cgctgcgctgaactcaagaaaacacagagcagagtccagaagatcagcaagaacaagcac
gacatacacttcctgcaggagtattcagagtggaagaaggaggcagtggacgtgtctttg
cctggggtttatatcggcctcgtggatcgactgcaggcgttcagtcacgtgatcgttcgc
tccacgaataggatgtgtgataatctgcacagctcgtacaccaacaaactcaaagacacc
tgtaagaacgataacgtgggcattaagacgacggtttttgctgttatggcggcaaagaag
aacatgatgcttccagaccccaaaaccagagacgacttcctacagtacgtcactcctctg
tctctggatgccaatacggcgcatgtgtttctgcgtctgacagaagagtgtaagaaggtg
accaacaccacaccatggcagcacagctatccagatctcccagagcgcttccaggacttc
aagcaggtgctgacgcaggagagcttctacctgggacgccactacttcgaggtggacatg
aagggtgaagggacacatgtgggtctgacctacaagagcatcgatcgcaagggctcacag
agcaacagctgcatcgctggaaacaacttctcctggtgtttgcagtggaacggccgcagc
ttctccgcctggcacagcgatgtggagacgccactcagctgccccaaaaccacccacatc
ggcatctacgtggactattctggaggccttctggctttctatgacgtggagaatgggatg
acgctcatccacaagtaccaggcagagtttctggagccgctttatcctgctttctggctc
cccaagaaggagaacgtggtgctgctggagcctggagctgcgtctcctctgtcttctcca
tctccatctcctgatgcttccactaaataa
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