Danio rerio (zebrafish): 568760
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Entry
568760 CDS
T01004
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
568760 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
568760 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
dre04131
]
568760 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
dre03029
]
568760 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
568760 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
568760 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
568760 (si:dkey-110c1.10)
Membrane trafficking [BR:
dre04131
]
Others
Actin-binding proteins
Myosins
568760 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
568760 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
568760 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Nab2
Motif
Other DBs
NCBI-GeneID:
568760
NCBI-ProteinID:
XP_068072739
ZFIN:
ZDB-GENE-050208-429
UniProt:
A0AB32TBP6
LinkDB
All DBs
Position
22:complement(20246056..20286887)
Genome browser
AA seq
1513 aa
AA seq
DB search
MIREEKNQSIIISGESGSGKTVSAKFTMRYFAVVGGAAQQTSVEEKVLASNPIMEAIGNA
KTTRNDNSSRFGKYIEIGFGCKGDIIGANMRTYLLEKSRVVFQAADERNYHIFYQLCASR
DLPELRTLRLDSAENFHYTNQGQDVHISGTDDVVELERTRNAFTILGVQTDQQMEIFRIL
AAILHLGNVNIQASGRGGDRSYIDGDDRSLAVFAKLLRVEGAQMAQWLCHRRLAVGGEML
VKPMTGQQANEARDALAKHVYEQLFTWTVQRLNSSLRAHREKPKSFTGVLDIYGFETFDR
NSFEQFCINYANEKLQQQFNRHVFQLEQEEYLREELPWNRIEFSDNQPCIALIEGQLGLL
DLLDEECRMPKGSDDNWARKLYDQHLNHSPHFLKPRMSNSAFIIVHFADKVQYECDGFLD
KNRDTVFEEPINILRASQSELVAELFQKESAGGCLPNSTLANGSVRSGKRAHREHKLTVG
FQFRQSLQLLMDTLNSTTPHYVRCIKSNDLKKPFLFDPKRAVQQLRACGVLETIQISAAG
YPSRLLQPNSRWTYEEFFARYRVLLQGFVSQDDVRHSCQSTLPDLIPDPEQYCFGKTKVF
FRAGQVAVLEKLRGDRLHAAGVLIQSWVRGWQQRRHYQRLRQATSILQRYTRGTLARRLA
WTLRYTRAALIIQKTYRMLAVRQLYLTIRGATIKIQAFIRGTKARRIYSQMLTERAVVIL
QARVRGWLARSSYRRIRGAVVLMQCCVRRRAARRELLRLRADARSVEKYRELNKGMEVKL
MQLQLRADQQARESASLRETLQTERDAHTSELENLHSSLLKLQNQLKESINTAPLVSQKQ
EEEWRRAEEKAKQEILQLTQEIQALRVDRDSLQKERDSLAIRLQDQEKAQEERRQQSADQ
ADASVRAELEEERRRYQSLLREFTRLEQRYDNLRDMSLFTTNERARGHRRTDSTVSLEPP
SPVTSPFSSSPVFPSPEQVRRISVTSPSDRGRWSQEHPLSMLMEDMSVAKDAAERMKSED
FRHAYDAIRVANKFLETQLLSQRAQWEQEISALRTNLQQLQDRDMPGDPDKNDLMEQVMV
REQECVRLRRELKELKHTVSLRRILSYSGLVVAESQDPTSPSPQRNQTITGLLECRKKDE
SKLIKHLITDVRAESVLSSSPGLVARVLFLCVRQVDCSGDQARVKGLCSAVVSGIKTALK
KHGNDLDMTAVWLKNSYVLRDLLLQHSPRQESRGSEDLLPLVTDVQEFVRALSDLCIQSY
QQLLSISESRLQPIIIPAMLESEMIPGLAGSSVKLSAARKRAGSDPRPPGGSEGVSMSSV
LRELSALHTALSRQHLPSVLQEQAFHQLVYLLSASTLNSLLLRKDMCCWSRGLQIRYNVS
VLEEWLRARSLQTGGAVGTLEPLIQAAQLLQMSKKTEADAQAMVQACSALTNQQMVKILS
LYTPQSDLEERVTLNFIRLVQALLKGRSEGPPQLLLDVRRVFPVTFPHDPPAQVTAEQMQ
IPEALKINFLRRV
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagaggagaaaaaccagtctatcataatcagtggagaatcaggctcaggtaaa
actgtatctgctaaattcaccatgcgctactttgctgttgtgggtggtgcagcccagcag
accagtgtggaggagaaagtcctggcatccaatcccatcatggaggcaattggtaatgca
aaaacaactcgcaatgacaacagcagccgttttgggaaatatattgagatcggatttgga
tgtaaaggggacattattggggcaaacatgaggacctacttgctggagaaatcaagagtc
gtctttcaggcagctgacgagagaaattaccacatcttctaccagctttgtgcttccaga
gatttgccagagctgaggacacttagacttgattctgcggagaatttccattacaccaac
caaggacaagatgtgcacatttcgggtacagatgatgtagtcgagctagagcggacaaga
aatgcctttactatacttggagtgcaaacagaccagcagatggagatatttcgtatcctg
gcagctattcttcacttggggaatgtcaacatacaagccagcggtcgtggtggggaccgc
agctacattgatggcgatgaccgttccttggcagtctttgccaagcttttgagggtggaa
ggtgctcagatggcccaatggctatgccacaggagactagcagtgggtggggagatgctt
gtaaagcccatgactggccaacaggcaaatgaagcacgggatgctctggctaagcatgtg
tacgagcaactgttcacatggacagtgcagaggctcaactcatccttacgagcacaccgg
gaaaagcctaaatctttcacaggagtccttgatatctatgggtttgagactttcgacaga
aatagttttgagcaattctgtatcaactatgcaaatgagaaacttcagcagcaattcaac
agacatgtgtttcagctggagcaggaggagtacctgcgagaggagcttccctggaaccgt
attgaattcagtgataatcagccatgcattgcactcattgaaggccagctgggcctactt
gatcttctggatgaagaatgcagaatgccaaaaggttcagatgacaactgggctcgaaag
ctttatgaccagcacctaaaccatagccctcattttcttaaaccacgcatgtccaactct
gcattcattattgtgcattttgctgataaggttcagtacgagtgtgatggctttttggac
aagaaccgagacactgtatttgaggagcccatcaatatactgagagctagtcagtcagaa
ctagttgcagagttgttccagaaagagtcagcagggggatgtcttcctaactccactctt
gcaaatggaagcgtacgttcagggaaaagagctcacagagagcacaaattaactgtgggc
tttcagtttcgccaatccctgcaacttttaatggacaccttgaacagcactacccctcat
tatgttcgctgcataaagtccaatgacctcaaaaagccctttctatttgatcccaagcga
gctgtgcagcagctgcgagcatgtggagtcttagagaccatccaaattagtgccgcaggc
tacccttccagattacttcaaccaaattctaggtggacatatgaggagttcttcgcccgt
taccgggtgctgctacaaggttttgtttctcaggatgatgtgcgccattcctgtcagagc
acccttcctgatcttatccctgatccggagcaatactgctttggcaagaccaaggttttc
ttccgggctgggcaagtagcggttctggagaagcttagaggagatcggctacatgcagca
ggggttttgatccaaagctgggtgagaggatggcaacagcgtaggcattatcagcggctc
cggcaggccacatctatcctgcagcggtacaccagaggaaccctggcccgaaggttggcg
tggacccttcgttatacacgtgctgctttaatcatccagaaaacataccgcatgctggct
gtgcgacagctttatctgaccatcagaggggccaccattaaaatccaggccttcatcaga
ggaaccaaggctcgtcgcatttattcacagatgctgacagagcgggcagtggtgatctta
caggcacgggtgcgaggatggctggcccggagcagctacaggcgcattagaggcgcagtg
gtgctcatgcagtgttgtgttcgtagaagagcagcacgtagagagctgctgcgtttgcgt
gctgacgctcgatctgtggagaagtacagagaacttaataaaggcatggaagtcaaactc
atgcagctgcagcttcgagccgaccaacaggcaagagaaagcgcatccctgagggaaact
cttcagaccgagcgtgacgctcacacctcagagctggagaatctgcactccagccttctc
aaactgcagaaccagctgaaggagagcataaacacagctcctttagtcagccaaaaacag
gaggaggagtggaggagagctgaggagaaggccaaacaggagattctccagctaacacag
gaaatccaagctctgagagttgacagagactctctgcagaaagagagagatagtttggct
attcgtttacaggatcaggaaaaagctcaggaggagcgtaggcagcagtctgcagatcag
gcagatgcttcagtgcgagcagagctggaagaggagagaaggagataccagagtttactg
agagagtttacaagactagagcaaagatacgacaacctcagagacatgagcttattcacc
acaaatgagcgtgcacgtggacatcgacgaacagattccaccgtgtctttagaacctcct
tcacccgtcacatcaccgttctccagctcacccgtcttcccttcacccgaacaggtcagg
aggatcagcgtaacatcaccctccgacaggggacgctggagccaagaacatcctctgagc
atgctgatggaggatatgagtgttgcaaaggatgcagctgagaggatgaagagcgaggat
ttcagacatgcctacgatgctattcgtgtggccaacaagtttctagagacgcagctgttg
tctcagagagcgcagtgggagcaggagatttcagctctcaggacgaatcttcagcagcta
caagacagagacatgcctggagatcctgacaaaaatgatctaatggagcaggtgatggtt
cgagagcaggaatgtgtccgattgcggcgtgagcttaaggagctgaaacataccgtgagc
ctcaggagaattctgtcttattcaggtctagtcgtggccgagtctcaggacccaacatct
ccttctcctcagcggaaccagacgatcactggactgctggagtgcaggaaaaaagatgag
agcaaactgatcaaacacctcataacagacgtgcgagcagagagcgtcttgtcttcatct
cctggactagtggctcgggttttgtttctgtgtgtgcgtcaggtggactgcagcggagat
caggcacgggtcaagggactttgcagtgctgttgtgagcggcattaaaactgccctgaag
aaacatggcaatgatctggacatgacggctgtgtggctgaagaactcgtatgtgctcaga
gacttgctgctccagcactctccccgacaggagtctaggggttcagaggatctgcttcct
ctagtgacggatgtgcaggagtttgttcgagctctcagtgatctgtgcattcagtcctat
cagcagctgctgtccatctccgagagccgcctgcagcccatcatcatcccggcgatgctg
gagagtgagatgattcctggtctggctggatcctcagtaaagctgagcgctgctcgtaag
cgggccggttcagatccgcgtcctccaggcggttcagaaggagtcagtatgtcctcagtc
ctgcgggagctttcggcccttcacacggccttgtcccgtcaacacctgccctccgtcctg
caggaacaggcctttcaccagctcgtgtacctgctgtccgcatccaccctcaacagtctg
ctgctgcgcaaggacatgtgctgctggagccgaggcctgcagatccggtataatgtgagc
gtgctggaggagtggctgcgggctcgttctcttcagacaggaggcgctgtggggactctg
gagccgctgatacaggccgcacagctcctgcagatgagcaagaagactgaagcggacgca
caggccatggttcaagcctgcagcgcactgactaaccagcagatggtgaagatcttgagt
ctgtacacacctcagagtgatctggaggagcgagtgacgctcaacttcatccgtctggtt
caggctctgctgaagggccgctcggaaggtcctcctcagctgctgctggacgtccggcgt
gtgtttcctgtcaccttccctcatgatcctccagcgcaggtcaccgcagagcagatgcag
atccctgaggccctcaagatcaacttcctgcgcagagtctga
DBGET
integrated database retrieval system
