Danio rerio (zebrafish): 568760
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Entry
568760 CDS
T01004
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
568760 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
568760 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
dre04131
]
568760 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
dre03029
]
568760 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
568760 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
568760 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
568760 (si:dkey-110c1.10)
Membrane trafficking [BR:
dre04131
]
Others
Actin-binding proteins
Myosins
568760 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
568760 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
568760 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Nab2
Motif
Other DBs
NCBI-GeneID:
568760
NCBI-ProteinID:
XP_073793892
ZFIN:
ZDB-GENE-050208-429
LinkDB
All DBs
Position
22:complement(20109476..20143226)
Genome browser
AA seq
1654 aa
AA seq
DB search
MATTELYTKGACVWVPDPEAVWVSAQLLRDYSPGDQQISIQLPDGREMEYPVLPPAGLPP
LGNPDILEGENDLTALTFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYEPLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMIREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFGCKGDIIGANMRT
YLLEKSRVVFQAADERNYHIFYQLCASRDLPELRTLRLDSAENFHYTNQGQDVHISGTDD
VVELERTRNAFTILGVQTDQQMEIFRILAAILHLGNVNIQASGRGGDRSYIDGDDRSLAV
FAKLLRVEGAQMAQWLCHRRLAVGGEMLVKPMTGQQANEARDALAKHVYEQLFTWTVQRL
NSSLRAHREKPKSFTGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFQLEQEEYL
REELPWNRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSDDNWARKLYDQHLNHSPHF
LKPRMSNSAFIIVHFADKVQYECDGFLDKNRDTVFEEPINILRASQSELVAELFQKESAG
GCLPNSTLANGSVRSGKRAHREHKLTVGFQFRQSLQLLMDTLNSTTPHYVRCIKSNDLKK
PFLFDPKRAVQQLRACGVLETIQISAAGYPSRWTYEEFFARYRVLLQGFVSQDDVRHSCQ
STLPDLIPDPEQYCFGKTKVFFRAGQVAVLEKLRGDRLHAAGVLIQSWVRGWQQRRHYQR
LRQATSILQRYTRGTLARRLAWTLRYTRAALIIQKTYRMLAVRQLYLTIRGATIKIQAFI
RGTKARRIYSQMLTERAVVILQARVRGWLARSSYRRIRGAVVLMQCCVRRRAARRELLRL
RADARSVEKYRELNKGMEVKLMQLQLRADQQARESASLRETLQTERDAHTSELENLHSSL
LKLQNQLKESINTAPLVSQKQEEEWRRAEEKAKQEILQLTQEIQALRVDRDSLQKERDSL
AIRLQDQEKAQEERRQQSVDQADASVRAELEEERRRYQSLLREFTRLEQRYDNLRDMSLF
TTNERARGHRRTDSTVSLEPPSLVTSPFSSSPVFPSPEQVRRISVTSPSDRGRWSQEHPL
SMLMEDMSVAKDAAERMKSEDFRHAYDAVRVANKFLETQLLSQRAQWEQEISALRTNLQQ
LQDRDTPGDPDKNDLLEQVMVREQECVRLRRELKELKHTVSLRRILSYSGLVVAESQDPT
SPSSQRNQTITGLLECRKKDESKLIKHLITDVRAESVLSSSPGLAARVLFLCVRQVDCSG
DQARVKGLCSAVVTGIKTALKKHGNDLDMTAVWLKNSYVLRDLLLQHSPRQESRGSEDLL
PLVTDVQEFVRALSDLCIQSYQQLLSISESRLQPIIIPAMLESEMIPGLAGSSVKLSAAR
KRAGSDPRPPGGSEGVSMSSVLRELSALHTALSRQHLPSVLQEQAFHQLVYLLSASTLNS
LLLRKDMCCWSRGLQIRYNVSVLEEWLRARSLQTGGAVGTLEPLIQAAQLLQMSKKTEAD
AQAMVQACSALTNQQMVKILSLYTPQSDLEERVTLNFIRLVQALLKGRSEGPPQLLLDVR
RVFPVTFPHDPPAQVTAEQMQIPEALKINFLRRV
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacagagctctacacaaagggggcatgtgtgtgggtgccagacccagaagct
gtgtgggtgtctgcacaactgcttcgagactacagtcctggagaccagcagatctcaatc
cagctacctgatggcagagagatggagtatccagtcttgcctccggctggtcttccacct
cttggtaaccctgatattttggagggagaaaatgacctcacagccctgacttttctccac
gagccagccgtacttcacaacttgcgtgtgcgctttctcgactacagtagtatctatact
tactgcgggatcgtgttggtggcattaaatccatacgagccgttgcccatttatggagaa
gaggtgattgacgcttacagcggacaggacatggctgatatggagccccacattttttct
gtggctgaagaggcgtaccgaacgatgatcagggaggagaaaaaccagtccatcataatc
agtggagaatcaggctcaggtaaaactgtatctgctaaattcaccatgcgctactttgct
gttgtgggtggtgcggcccaacagaccagtgtggaggagaaagtcctggcatccaatccc
atcatggaggcaattggtaatgcaaaaacaactcgcaatgacaacagcagccgttttggg
aaatatattgagatcggatttggatgtaaaggggacattattggggcaaacatgaggacc
tacttgctggagaaatcaagagtcgtctttcaggcagctgacgagagaaattaccacatc
ttctaccagctttgtgcttccagagatttgccagagctgaggacacttagacttgattct
gcagagaatttccattacaccaaccaaggacaagatgtgcacatttcgggtacagatgat
gtagtcgagctagagcggacaagaaatgcctttactatacttggagtgcaaacagaccag
cagatggagatatttcgtatcctggcagctattcttcacttggggaatgtcaacatacaa
gccagcggtcgtggtggggaccgcagctacattgatggcgatgaccgttccttggcagtc
tttgccaagcttttgagggtggaaggtgctcagatggcccaatggctatgccacaggaga
ctagcagtgggtggggaaatgcttgtaaagcccatgactggccaacaggcaaatgaggca
cgggatgctctggctaagcatgtgtacgagcaactgttcacatggacagtgcagaggctc
aactcatccttacgagcacaccgggaaaagcctaaatctttcacaggagtccttgatatc
tatgggtttgagactttcgacagaaatagttttgagcaattctgtatcaactatgcaaat
gagaaacttcagcagcaattcaacagacatgtgtttcagctggagcaggaggagtacctg
cgagaggagcttccctggaaccgtattgaattcagtgataatcagccatgcattgcactc
attgaaggccagctgggcctacttgatcttctggatgaagaatgcagaatgccaaaaggt
tcagatgacaactgggctcgaaagctttatgaccagcacctaaaccacagccctcatttt
cttaaaccacgcatgtccaactctgcattcattattgtgcattttgctgataaggttcag
tacgagtgtgatggctttttggacaagaaccgagacactgtatttgaggagcccatcaat
atactgagagctagtcagtcagaactagttgcagagttgttccagaaagagtcagcaggg
ggatgtcttcctaactccactcttgcaaatggaagcgtacgttcagggaaaagagctcac
agagagcacaaattaactgtgggctttcagtttcgccaatccctgcaacttttaatggac
accttgaacagcactacccctcattatgttcgctgcataaagtccaatgacctcaaaaag
ccctttctatttgatcccaagcgagctgtgcagcagctgcgagcatgtggagtcttagag
accatccaaattagtgccgcaggctacccttccaggtggacatatgaggagttcttcgcc
cgttaccgggtgctgctacaaggttttgtttctcaggatgatgtgcgccattcctgtcag
agcacccttcctgatcttatccctgatccggagcaatactgctttggcaagaccaaggtt
ttcttccgggctgggcaagtagcggttctggagaagcttagaggagatcggctacatgca
gcaggggttttgatccaaagctgggtgagaggatggcaacagcgtaggcattatcagcgg
ctccggcaggccacatctatcctgcagcggtacaccagaggaaccctggcccgaaggttg
gcgtggacccttcgttatacacgtgctgctttaatcatccagaaaacataccgcatgctg
gctgtgcgacagctttatctgaccatcagaggggccaccattaaaatccaggccttcatc
agaggaaccaaggctcgtcgcatttattcacagatgctgacagagcgggcagtggtgatc
ttacaggcacgggtgcgaggatggctggcccggagcagctacaggcgcattagaggcgca
gtggtgctcatgcagtgttgtgttcgtagaagagcagcacgtagagagctgctgcgtttg
cgtgctgacgctcgatctgtggagaagtacagagaacttaataaaggcatggaagtcaaa
ctcatgcagctgcagcttcgagccgaccaacaggcaagagaaagcgcatccctgagggaa
actcttcagaccgagcgtgacgctcacacctcagagctggagaatctgcactccagcctt
ctcaaactgcagaaccagctgaaggagagcataaacacagctcctttagtcagccaaaaa
caggaggaggagtggaggagagctgaggagaaggccaaacaggagattctccagctaaca
caggaaatccaagctctgagagttgacagagactctctgcagaaagagagagatagtttg
gctattcgtttacaggatcaggaaaaagctcaggaggagcgtaggcagcagtctgtagat
caggcagatgcttcagtgcgagcagagctggaagaggagagaaggagataccagagttta
ctgagagagtttacaagactagagcaaagatacgacaacctcagagacatgagcttattc
accacaaatgagcgtgcacgtggacatcgacgaacagattccaccgtgtctttagaacct
ccttcactcgtcacatcaccgttctccagctcacccgtcttcccttcacccgaacaggtc
aggaggatcagcgtaacatcaccctccgacaggggacgctggagccaagaacatcctctg
agcatgctgatggaggatatgagtgttgcaaaggatgcagctgagaggatgaagagcgag
gatttcagacatgcctacgatgctgttcgtgtggccaacaagtttctagagacgcagctg
ttgtctcagagagcgcagtgggagcaggagatttcagctctcaggacgaatcttcagcag
ctacaagacagagacacgcctggagatcctgacaaaaatgatctattggagcaggtgatg
gttcgagagcaggaatgtgtccgattgcggcgtgagcttaaggagctgaaacataccgtg
agcctcaggagaattctgtcttattcaggtctagtcgtggccgagtctcaggacccaaca
tctccttcttctcagcggaaccagacgatcactggactgctggagtgcaggaaaaaagat
gagagcaaactgatcaaacacctcataacagacgtgcgagcagagagcgtcttgtcttca
tctcctggactagcggctcgggttttgtttctgtgtgtgcgtcaggtggactgcagcgga
gatcaggcacgggtcaagggactttgcagtgctgttgtgaccggcattaaaactgccctg
aagaaacatggcaatgatctggacatgacggctgtgtggctgaagaactcgtatgtgctc
agagacttgctgctccagcactctccccgacaggagtcgaggggttcagaggatctgctt
cctctagtgacggatgtgcaggagtttgttcgagctctcagtgatctgtgcattcagtcc
tatcagcagctgctgtccatctccgagagccgcctgcagcccatcatcatcccggcgatg
ctggagagtgagatgattcctggtctggctggatcctcagtaaagctgagcgctgctcgt
aagcgggccggttcagatccgcgtcctccaggcggttcagaaggagtcagtatgtcctca
gtcctgcgggagctttcggcccttcacacggccttgtcccgtcaacacctgccctccgtc
ctgcaggaacaggcctttcaccagctcgtgtacctgctgtccgcatccaccctcaacagt
ctgctgctgcgcaaggacatgtgctgctggagccgaggcctgcagatccggtataatgtg
agcgtgctggaggagtggctgcgggctcgttctcttcagacaggaggcgctgtggggact
ctggagccgctgatacaggccgcacagctcctgcagatgagcaagaagactgaagcggac
gcacaggccatggttcaagcctgcagcgcactgactaaccagcagatggtgaagatcttg
agtctgtacacacctcagagtgatctggaggagcgagtgacgctcaacttcatccgtctg
gttcaggctctgctgaagggccgctcggaaggtcctcctcagctgctgctggacgtccgg
cgtgtgtttcctgtcaccttccctcatgatcctccagcgcaggtcaccgcagagcagatg
cagatccctgaggccctcaagatcaacttcctgcgcagagtctga
DBGET
integrated database retrieval system