KEGG   Danio rerio (zebrafish): 568796
Entry
568796            CDS       T01004                                 
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20 precursor
  KO
K16498  protocadherin delta 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    568796 (pcdh20l)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dre01009]
    568796 (pcdh20l)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    568796 (pcdh20l)
Protein phosphatases and associated proteins [BR:dre01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     568796 (pcdh20l)
Cell adhesion molecules [BR:dre04515]
 Cadherins
  Protocadherins
   568796 (pcdh20l)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th Cadherin_pro DUF4577
Other DBs
NCBI-GeneID: 568796
NCBI-ProteinID: NP_001338645
ZFIN: ZDB-GENE-091204-115
Ensembl: ENSDARG00000101910
UniProt: A0A0R4IBQ5
LinkDB
Position
14:16845794..16850437
AA seq 833 aa
MNWKTLQWVLLLACAGQIHSLALRFSVLEEQEAGLKIGTLSTNYSAPYRLLNERYIRVDE
ITGDLFTKDRLDRETLCPSHQDGECTFLNTAVVSPHLDVVPMVIVVNDINDNAPVFERNE
IPLRIPEDTSIGTTFLLDDQAQDKDTANNGLIHYHLEGSNGFFGIRQEDYGLELIVQKEL
DRETQDNYFLVLVAVDRGSMPLSATANLSVTVTDVDDNCPEFDDDSPIKAIVPGLGIKGT
AVAQLKATDKDLGQNAQITFSFSRQISDRAKTLFYMDRHTGLISLAVDVHTDSPEEHMLK
VFANGPLCPPAQAQVTVYIQPMVSSEPTIKIRFVTEHKNQVIMLQENEPPTVLALLELED
TSSDKGTLSLETDSMPFSLKQQAGSYLLSTSKALDFELCGEYDVTVVISDPHGARLHGRE
VIKVVVQDLNDNAPKFEQTRYETDIKENNKPGEFLLKVQATDADSHQFGKVEYRITNGSP
FRIQEETGVILVTEPLDREQQGTYILTVLAQDGGDPSQEAFAIVFVNVLDMNDNPPAFPT
PHFYFFVSESLPHLSQVGKVTVSDADDGDNGRIVDLRILNDKAPFVIDMSQGMLRSTGEV
DREKQDRYELLVVAVDGGSPVLSTTVKMTVFVEDINDNQPQVLLPSSNLSCLTISPATQA
GSMITKIYAIDEDSGMNSDITYQIIASEPALQSPFQIDQHSGNITLVQHLRGEDYGMHHL
FIVVRDGGKPDPLQTTIWVNLLVNETLEKCHVNAVPEYSPQTLPTSMPLSVRGSRCESNS
WLIFLCGLGLMVMSVFILLVSVVVFLKHKKTRRKMEKKDVWESKNICELKPLN
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaattggaaaacactacagtgggtgcttctcttggcatgtgctgggcaaatccatagc
cttgcactgcgtttcagcgtcctggaggagcaagaagcaggccttaaaattggaacacta
agtacaaactactcagctccataccggcttctcaatgaaagatacatcagggtggatgag
ataacaggggatctgttcactaaagatcgccttgatagagaaactttgtgtccatcacat
caggatggagaatgtacttttttaaatactgcagtcgtgagccctcatttggacgtagtt
ccaatggtaattgttgtgaatgatattaatgacaatgctcctgttttcgaaaggaatgaa
attcctctacgcatacctgaagatacgtccattgggactactttcctgctggatgaccaa
gcccaggataaggacactgcaaataatggcttgatacattatcatttagagggatctaat
ggattttttggcatcagacaagaggattatggactcgagctcatagtacaaaaggaacta
gaccgagaaactcaggataactacttcttagttcttgtagcagtagacagaggttcaatg
ccactcagcgctactgctaatctcagtgtaactgtaaccgatgttgatgacaactgccca
gaatttgatgatgatagccccatcaaagccattgtgccaggattaggaatcaagggcact
gcggtggctcagcttaaagcaacagacaaagacctgggccaaaatgcccagatcacattt
tccttcagccgtcagatctcagacagagccaaaacactcttttacatggacagacacaca
ggcctgatcagcttagcagttgatgtgcacactgacagtcctgaggagcacatgctgaaa
gtttttgcgaatggtccactttgcccccctgcacaagctcaagtaactgtatacattcag
cccatggtgagctctgagccgaccataaagatcaggtttgtcacagagcataaaaaccaa
gtaatcatgttacaagagaacgaaccccccaccgtcttggccctcttggagttggaagac
acctctagtgataaaggtactctgtccttagaaacagacagcatgccattttctttgaaa
cagcaagcaggcagctatttgctttcaacatcaaaagctctagattttgagctgtgcggc
gagtacgatgttacagttgttatttctgatcctcatggcgcacgcctacatggaagggaa
gtgatcaaagtggtggttcaagatctgaatgataatgccccaaagtttgaacaaacacgt
tacgaaacagacatcaaggagaacaacaagcctggagagtttctgctgaaggtacaggct
actgatgcagatagccatcagtttggcaaagtagagtataggattacaaacgggagtcct
ttcagaattcaggaagagacaggtgtgatattggtcacagagcctttagatagagaacag
caggggacatacatcctgactgttcttgcccaggacggcggcgatccttctcaggaggcc
tttgctattgtgtttgtaaatgtactggatatgaacgacaatccaccagcctttccaacc
cctcatttctatttttttgtgtctgagagccttccgcatctttctcaagtcggtaaagtc
acagtaagtgatgctgatgacggagacaatggaagaatagtggatttgcgtatattaaat
gacaaggcccctttcgtcatagacatgtcacaagggatgctccgcagtactggtgaagtc
gaccgtgagaagcaagatcgctatgagcttttggttgtcgctgtagatggtggcagtcca
gtcctctccactactgtgaaaatgactgtttttgttgaggatatcaatgataatcaacca
caggtccttcttcctagcagcaacctgtcctgtctgaccatatctccagctacccaggca
ggaagcatgataacaaagatctacgccattgacgaggactcaggaatgaattcagatatc
acatatcaaattattgcaagtgaaccagctctccaaagcccctttcagattgaccagcac
tcaggaaacatcacccttgtccagcatctgcgcggtgaagactacggcatgcaccacctt
ttcatagttgttcgtgatggaggaaaaccagacccgctgcagaccaccatatgggttaat
ttactggtcaatgaaactttggaaaaatgtcacgttaatgctgtcccagaatactctcct
cagacattgcctacttcaatgccgctttctgtcagaggctccagatgtgaatcaaattcc
tggctcatttttctttgtggcctgggcctgatggtcatgtcggtttttattcttctagtg
tctgtagtggtatttctaaaacacaaaaagacgagaagaaaaatggaaaaaaaggatgta
tgggaaagtaaaaatatctgtgaactgaaacctttaaactaa

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