Danio rerio (zebrafish): 568796
Help
Entry
568796 CDS
T01004
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20 precursor
KO
K16498
protocadherin delta 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
568796 (pcdh20l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
568796 (pcdh20l)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
568796 (pcdh20l)
Protein phosphatases and associated proteins [BR:
dre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
568796 (pcdh20l)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Protocadherins
568796 (pcdh20l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_pro
DUF4577
Motif
Other DBs
NCBI-GeneID:
568796
NCBI-ProteinID:
NP_001338645
ZFIN:
ZDB-GENE-091204-115
Ensembl:
ENSDARG00000101910
UniProt:
A0A0R4IBQ5
LinkDB
All DBs
Position
14:16845794..16850437
Genome browser
AA seq
833 aa
AA seq
DB search
MNWKTLQWVLLLACAGQIHSLALRFSVLEEQEAGLKIGTLSTNYSAPYRLLNERYIRVDE
ITGDLFTKDRLDRETLCPSHQDGECTFLNTAVVSPHLDVVPMVIVVNDINDNAPVFERNE
IPLRIPEDTSIGTTFLLDDQAQDKDTANNGLIHYHLEGSNGFFGIRQEDYGLELIVQKEL
DRETQDNYFLVLVAVDRGSMPLSATANLSVTVTDVDDNCPEFDDDSPIKAIVPGLGIKGT
AVAQLKATDKDLGQNAQITFSFSRQISDRAKTLFYMDRHTGLISLAVDVHTDSPEEHMLK
VFANGPLCPPAQAQVTVYIQPMVSSEPTIKIRFVTEHKNQVIMLQENEPPTVLALLELED
TSSDKGTLSLETDSMPFSLKQQAGSYLLSTSKALDFELCGEYDVTVVISDPHGARLHGRE
VIKVVVQDLNDNAPKFEQTRYETDIKENNKPGEFLLKVQATDADSHQFGKVEYRITNGSP
FRIQEETGVILVTEPLDREQQGTYILTVLAQDGGDPSQEAFAIVFVNVLDMNDNPPAFPT
PHFYFFVSESLPHLSQVGKVTVSDADDGDNGRIVDLRILNDKAPFVIDMSQGMLRSTGEV
DREKQDRYELLVVAVDGGSPVLSTTVKMTVFVEDINDNQPQVLLPSSNLSCLTISPATQA
GSMITKIYAIDEDSGMNSDITYQIIASEPALQSPFQIDQHSGNITLVQHLRGEDYGMHHL
FIVVRDGGKPDPLQTTIWVNLLVNETLEKCHVNAVPEYSPQTLPTSMPLSVRGSRCESNS
WLIFLCGLGLMVMSVFILLVSVVVFLKHKKTRRKMEKKDVWESKNICELKPLN
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaaaacactacagtgggtgcttctcttggcatgtgctgggcaaatccatagc
cttgcactgcgtttcagcgtcctggaggagcaagaagcaggccttaaaattggaacacta
agtacaaactactcagctccataccggcttctcaatgaaagatacatcagggtggatgag
ataacaggggatctgttcactaaagatcgccttgatagagaaactttgtgtccatcacat
caggatggagaatgtacttttttaaatactgcagtcgtgagccctcatttggacgtagtt
ccaatggtaattgttgtgaatgatattaatgacaatgctcctgttttcgaaaggaatgaa
attcctctacgcatacctgaagatacgtccattgggactactttcctgctggatgaccaa
gcccaggataaggacactgcaaataatggcttgatacattatcatttagagggatctaat
ggattttttggcatcagacaagaggattatggactcgagctcatagtacaaaaggaacta
gaccgagaaactcaggataactacttcttagttcttgtagcagtagacagaggttcaatg
ccactcagcgctactgctaatctcagtgtaactgtaaccgatgttgatgacaactgccca
gaatttgatgatgatagccccatcaaagccattgtgccaggattaggaatcaagggcact
gcggtggctcagcttaaagcaacagacaaagacctgggccaaaatgcccagatcacattt
tccttcagccgtcagatctcagacagagccaaaacactcttttacatggacagacacaca
ggcctgatcagcttagcagttgatgtgcacactgacagtcctgaggagcacatgctgaaa
gtttttgcgaatggtccactttgcccccctgcacaagctcaagtaactgtatacattcag
cccatggtgagctctgagccgaccataaagatcaggtttgtcacagagcataaaaaccaa
gtaatcatgttacaagagaacgaaccccccaccgtcttggccctcttggagttggaagac
acctctagtgataaaggtactctgtccttagaaacagacagcatgccattttctttgaaa
cagcaagcaggcagctatttgctttcaacatcaaaagctctagattttgagctgtgcggc
gagtacgatgttacagttgttatttctgatcctcatggcgcacgcctacatggaagggaa
gtgatcaaagtggtggttcaagatctgaatgataatgccccaaagtttgaacaaacacgt
tacgaaacagacatcaaggagaacaacaagcctggagagtttctgctgaaggtacaggct
actgatgcagatagccatcagtttggcaaagtagagtataggattacaaacgggagtcct
ttcagaattcaggaagagacaggtgtgatattggtcacagagcctttagatagagaacag
caggggacatacatcctgactgttcttgcccaggacggcggcgatccttctcaggaggcc
tttgctattgtgtttgtaaatgtactggatatgaacgacaatccaccagcctttccaacc
cctcatttctatttttttgtgtctgagagccttccgcatctttctcaagtcggtaaagtc
acagtaagtgatgctgatgacggagacaatggaagaatagtggatttgcgtatattaaat
gacaaggcccctttcgtcatagacatgtcacaagggatgctccgcagtactggtgaagtc
gaccgtgagaagcaagatcgctatgagcttttggttgtcgctgtagatggtggcagtcca
gtcctctccactactgtgaaaatgactgtttttgttgaggatatcaatgataatcaacca
caggtccttcttcctagcagcaacctgtcctgtctgaccatatctccagctacccaggca
ggaagcatgataacaaagatctacgccattgacgaggactcaggaatgaattcagatatc
acatatcaaattattgcaagtgaaccagctctccaaagcccctttcagattgaccagcac
tcaggaaacatcacccttgtccagcatctgcgcggtgaagactacggcatgcaccacctt
ttcatagttgttcgtgatggaggaaaaccagacccgctgcagaccaccatatgggttaat
ttactggtcaatgaaactttggaaaaatgtcacgttaatgctgtcccagaatactctcct
cagacattgcctacttcaatgccgctttctgtcagaggctccagatgtgaatcaaattcc
tggctcatttttctttgtggcctgggcctgatggtcatgtcggtttttattcttctagtg
tctgtagtggtatttctaaaacacaaaaagacgagaagaaaaatggaaaaaaaggatgta
tgggaaagtaaaaatatctgtgaactgaaacctttaaactaa
DBGET
integrated database retrieval system