Danio rerio (zebrafish): 568908
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Entry
568908 CDS
T01004
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
dre
Danio rerio (zebrafish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
SH3_2
Ank_4
SAM_2
PDZ_6
PDZ
Ank_5
FERM_f0
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
568908
NCBI-ProteinID:
XP_068074207
ZFIN:
ZDB-GENE-130530-691
UniProt:
A0AB32TJV6
LinkDB
All DBs
Position
3:complement(29487355..29649149)
Genome browser
AA seq
2509 aa
AA seq
DB search
MTMPLSPLSSDEEQQRMLGNSQHLYPGAEEEEEEEEEMDDDGMDEEGEEENGELEMDDEE
EVDDEDDIRRGPGHLRGGREEGHRQKGTMAGRLPGDRPIRPGNPGHAANPYSSNPGPTHQ
TSTNQQQQQPQRKLRERSSSNAPDDTHVALMVFRIGIPDIKQTKCLRFNPDATVWKAKQQ
VMCSLTESLRDVLNYGLFQPATDGHDAKFLEEERPLREYPQSFEKGVPYLEFRYKTRVYK
QTNLDEKQLAKLHTKASLKKFMDYIQTSAVEKVAKLIDKGLDPNYHDPDTGETPLTLAVQ
TEPGGSEIIRVLVMGGAHIDFRARDGLTPLHKAVRAHAHTALLTLLSLGASSDYKDSRGL
TPLYHTVLIGGDTSCCETLLYHRARLGLRDENGWDETHQACQNGNSQHLEHLLFYGADSS
SQNASGNTALHICALYNKESCARILLYRGAKKDTKNNSGQNSFQVAVMSGHFELGEIIKN
HRESDVVPFLESPKYAPQRRESSRTLGLPHPHPFLRANSDNSMNVPDWIAFPNAAGSSIV
SVQGLKHGGTLRSSSSPRGARTRSPSRGRTGDRDDRSRQTRGRQGAGSISSQGTASGQRR
RLYSAVPGRVFVATRSHSAQGDREISFNKGDKVKVLSVGEGGYWEGTVRGRTGWFPSDCV
EEVALRSLESRSESRSERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDNEGFGFV
LRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ
VVNMIRQGGNSLMVKVVMVTRNPDMEEGVRKKIPQQSKRLSTPAIALRSKSMTSELEEME
VPHCHYQHPHYRTQGLFLVTCLTNLSCNLPNFSVCPGIPYTVDRASAPWKKKSEFESSQA
TEKKRTVYQMALNKLDEILAAAQQTINTNEAPGPRVQGVKRERGRGFYNEPNFDQTGMGM
TSSGAGLGYDRGQFVSGHGPPHGMLRQKSIGVPEEEKQFLHPPAMKFARSLSVPGPDEIP
PPPTTAPPEPPFSSAPPLGFRGKTSQQPSVSMSQSTSSAAHYQLYSQSVHVTHGPRDRSP
GPPTGSGTGDLAYSHAQAHPSVPSRTASRKVIGYTGDLAGAGGVAGAKAAALRRGYSNAV
PPTSVATVIPQQQQTTQNQPSRMDRSGMGVGAGGVPKGGARRGKGPLVKQSKVEDLRQGQ
DTLEAKVSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEAEPPPPGESDSSKPEPVVPPP
APTVPPPAPPSIPAPPPPSLPSLRTQESLDFTSQFGAAIVGAARRDRERFHEARRKSASF
FLSAEEELSGAGGAGGRTQTSQQQLSSQPSPRLRPSKSIDEGMFSGDTFIHHTRSMPPAF
GLPEYSSPAPQGDYQPKSVPADFYGAGSRQQQQQQQQQAPTTTFIHPLTGKVLDPSSPLG
LALAARERALKDDGRIRRERTTEHHFTRQLSSIGAFSSSTSQPTSHISYPMASSSSATSS
AAQSTNTSSYLVTSSSLAATTTSTRPPSPRILRGAGSSWSEEAGVGERADREAAGTSAPR
EGLRVRFSEDKTVHTHHYQSQQYQPTFKERERERQRERSREREREREREREIEKAQTQYQ
QQSSQPMTQQPRRPSFLRMESEAGAYILSLTPPSPPPTAAPMRPTAGATGESGSGTSLMV
LPPPAPSVDADDEFVFADPLPPPLEFANSFDRGLGYSAMISHNVAARQQRHPPPPPPPPP
PPTSKDSFMTGFPAHTPLPSPQAGDSTTSSLTSYDSEVANLTQSAPSPSPSSPNPLPPHS
PSTLQTSGPPPPPSVSPPPPPNSYHRPFGLSQSQHLYNSTHTTGRSSSPTPPLSIPAPPA
YRGPPTASSTPATSVSIRGASTVTASCSTTASTTVTSPSTTAAATPHTRIATVSTVATGG
SRRPSAEHHPPPSATKSGESQETVVDSGIEELDSRSSSDHHLDSILALSGSGVRERLERA
GMSSIGGIGGRDGATEVDRTSGADFLESYMSYLDGQTFEMHNAKAASTASTYPKTQRYRE
GTRAGDLRRQTSTAPPAYHRRREEEEEEDEAEEVEEEDLSARDGYGMREGPGIARSSVMY
FDRPRTPEIKPLWGDGSTGASQTMGEGGGQIVGTYVEPRKLHPPMTGMKANIINELSTKL
QQRSKGTENWGAQRSLSRHRFSEDSTGALSPPSVRSSSPSPVQLSQPALSPSPTPSSQPL
YSNWARSPSPQPPAASSQPPPRSHSPVSPSSYSPYPTSPKHRPVYRTKALEFQFIPSRES
RKSESHHAQRRRAPSPLISPSDRPKLGPPRPSSLPILPTTPLYSSLYDLRGSITPPSPAN
PLGDPYFSPSPPLFAPSGAPPPPNSSLVVSRSLSPTHFLSGTSSPPLHPIPPPTCLSYPH
LPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTKDDYLDL
GVTRVGHRMNIERALRRVMDRLSSSTFPISALSPRNGRTNRRRDEANRS
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgctcagccccctctccagcgacgaggagcagcaaaggatgctgggaaac
agtcaacacctttatccaggggcggaagaggaagaggaggaggaagaggaaatggacgat
gatggcatggacgaggaaggtgaggaggagaacggagagctggagatggacgatgaagag
gaagtggacgatgaagatgacatcaggcgaggaccagggcatttgagaggaggcagggaa
gaggggcacaggcaaaaaggcacaatggctggacgactcccaggagacagacccattcga
cccggcaacccgggccatgcggccaacccttattcgtccaatcctggaccaacccaccaa
acgtcaaccaatcagcagcagcagcaaccgcagaggaagctacgagagcggagctccagc
aacgcacctgacgacacacacgtagctctgatggtctttcgaattggcattcctgatatt
aaacagacgaaatgtctgaggttcaaccctgatgcaaccgtatggaaggcgaagcagcag
gtgatgtgcagtctgactgagtctctgagggatgttttaaactatggtctttttcaacct
gccactgacgggcacgatgccaagttcctggaggaggagaggccgctccgcgagtaccca
caatcctttgagaaaggagtaccttacctggagttccgatataaaaccagggtgtacaaa
cagacaaatctagatgagaagcagctggccaaactacatactaaggccagtctgaagaag
ttcatggactacatccagaccagcgctgtggaaaaggtagccaaacttattgataaagga
cttgaccccaactaccacgaccctgatacaggagagactccactcactctggccgtacag
acggagccgggcggaagtgagatcatcagggtgctggtgatgggtggagcccacattgac
tttagggcgagagatggcttgacccctctgcacaaggctgtcagagcacatgcacacact
gccctactgacgctgttgtctttgggggcgtcttctgattataaggacagccgtgggctg
acaccactgtaccacactgtgctgatagggggcgacacctcctgctgcgagaccctgcta
taccacagagccaggctggggctccgcgatgagaacggctgggatgagacacatcaggcg
tgtcaaaatgggaactctcaacatttagagcacctgcttttttatggtgcagactcctca
tcccagaatgcctcaggaaacactgccctgcacatatgtgctttatataacaaggagagc
tgtgcccgcatcctgctttatcgaggagctaagaaggacacaaagaataacagtgggcag
aactccttccaggtggctgtgatgtctggccattttgagcttggagaaataattaaaaac
caccgtgaatcagatgtagtcccctttttggagtctcctaaatatgccccgcaaaggagg
gagagctcacggacacttggactgcctcatccgcacccctttttacgggccaacagtgat
aacagcatgaatgtgccagactggattgcctttcccaatgctgcaggatcaagcatcgtc
tctgtacagggtctaaagcatggcggcaccttacgtagctccagcagtccccgtggagcc
cgaacacgttccccatctcgtggccgaacaggtgaccgggacgatcggagccggcaaaca
cgtggaagacaaggagcgggatccatcagtagtcagggcacagccagcgggcagcggcgg
cgtctctacagcgccgttcctggccgagtttttgttgccactcgctcacactcggcccag
ggtgaccgcgaaatcagcttcaacaagggagacaaagtcaaagtgctgagtgtgggtgaa
ggaggctattgggaagggacggttcgaggacgcacaggctggttcccctcagactgcgtg
gaggaagttgctctccgtagcctggaatctcgttcagagagccgcagtgagagagccaag
agactcttccggcattatactgttggatcctacgacagcttcgatgcgcccagtgactac
ataatcaaggagaagacagtcctcctgcagaaaaaagacaatgaaggttttggctttgtg
ctgagaggagccaaggctcagacccctatagaagagttcactcccaccccagcctttcca
gcactgcagtaccttgagtctgtcgacgagggaggcgtggcctggagagctggtctgcga
atgggagacttccttatagaggtgaatggtcagaatgtggttaaggtgggacacaggcag
gtggtcaatatgatcaggcaaggcggtaacagtctcatggtcaaggttgtcatggttact
cgaaatcctgatatggaggaaggggtcagaaagaaaatcccacagcagagtaaaagactg
agcacaccggctatcgctctgcgctccaaatccatgacatcagagctggaagagatggaa
gttccacactgtcactaccagcacccccactacagaacgcaagggttgtttttggtgaca
tgtcttactaacctgtcttgtaacctccctaatttttctgtctgtcctggcattccatac
acagtggacagagcctctgccccatggaaaaaaaaatcagagttcgaatcttcacaagct
acagagaagaagaggacagtttatcagatggctttgaataaactggatgagattttagca
gcagcacagcagaccattaatacaaatgaggctccagggccccgggttcagggggtaaaa
agagaacggggcagaggcttttataatgagccaaatttcgaccaaactggaatggggatg
acatcatctggggcagggttaggctacgaccgtggtcaatttgtgtctggccatggcccc
ccgcacggtatgctgcgacagaagtctatcggggttcctgaggaggagaagcagtttctt
catcctccagccatgaagtttgcccgtagtctttcagtacctggcccagatgaaatccct
cctccacctactacagcaccccctgagccccctttttcctcagctcctccgcttggcttt
aggggcaagacatctcaacagccgtctgtttctatgtctcagtctacttcctctgctgca
cattatcaactctactcacagtcagtacatgttactcacggaccaagggacaggtcccct
ggaccacctactgggtctggaactggggaccttgcttattcccatgcccaagcccacccc
tctgtaccaagtaggactgcctccaggaaggtgattgggtacacaggagatcttgcaggg
gctggaggagtggctggggccaaagctgcagcattgagaaggggttacagcaatgcagtc
ccacccaccagtgtcgctactgtgattccacaacagcagcagactactcagaaccaacct
tccagaatggaccggagtggaatgggggtaggggctggtggtgtaccaaaaggcggtgct
cgtagaggaaaggggcccttggtgaaacagtcaaaggtggaagacctgcgtcaaggtcaa
gacactctagaagcaaaggtgtcagtggagaagagctctattccaatcccaactatcatt
gttaaagccccttccaccagcagtagtggacgcagtagccaaggcagcagtgtggaggct
gaaccaccgcccccaggagaaagtgacagttctaaaccagaacctgttgttcccccacct
gcaccaaccgtgccaccaccagcccctccatctatacctgctcctccacccccatcactg
ccatcacttcgtactcaagagagtctggacttcaccagccagtttggtgctgccattgta
ggggcagctcgcagggacagagaacgatttcatgaagcacgacgcaagagtgcctccttt
tttctttctgctgaggaagagttgagtggagctggaggagcaggagggcggactcagact
tctcaacagcagctgagttcccagccttcaccacgcctgcgaccatccaaatctatagat
gaaggcatgttctcaggtgatacttttatccatcacacacgcagtatgcctcctgcattt
ggcttgcctgagtactcctcacctgctcctcaaggggattaccagcctaagtctgtacct
gctgacttctatggggcaggatccagacaacagcagcagcagcagcagcagcaagccccc
accacaacttttattcacccactaactggaaaagtactggacccttcatcccctctaggc
ttggctttggctgcacgggaacgtgccttgaaggatgatggacgtatacgtagggaaagg
accactgaacatcattttacccgtcagttgtcaagcattggggccttttcctcatccact
tcacagccaacatcacacatttcctacccaatggcctcgtcttcctctgcaacctcctct
gctgctcaatccacaaacacctcttcatatcttgttacctcctcatcattagctgccacc
accacatccactcggcctccatctcctaggatcctgcgtggagcagggagtagctggagt
gaagaagctggggttggagagcgtgcggatagggaagcagctggcacctctgctcccaga
gaaggcctaagggttcgtttctccgaggataaaactgtccacacacaccactatcaatct
cagcaatatcagcccacctttaaagagcgtgaaagagaacgtcaaagagagaggtcaaga
gaaagagagagggaaagagagagggaaagagaaatagaaaaagctcaaacccagtatcag
caacagtcatcacaaccaatgacccagcagcctcgacgcccctcattcttgaggatggag
agtgaagctggagcgtacattctttcattaacgcctccatctcctcctccaacagcagcc
cctatgcgtcctacagcaggagccacaggtgaaagtggaagtggtacaagcctgatggtt
ctgcctcccccagctccctcagtagatgcagatgatgagtttgtgtttgctgatcctctt
cctccacctctagagtttgccaatagttttgatcgtggtttgggttactctgcgatgatt
tctcacaatgttgcagcccgtcagcagcgtcatcctccaccaccccctcccccaccaccc
ccgcccacttcgaaagattcctttatgacaggctttccagctcacacacccctaccgtca
cctcaggcaggagattccacaacttccagtcttacctcctatgacagtgaggttgcaaac
ctaacacaatctgccccatcgccctccccatcttctcccaacccactaccacctcactcc
ccctccacccttcagacatctggaccacctccacctccctctgtatcacctcctccacca
cccaacagctaccatagaccttttggcttatctcagtcacaacatttatacaacagtaca
cacacaactggacgctcctcctctcccaccccacctctctctattccagctccacctgcc
taccgggggccaccaacagcatcatccacccctgcaacttctgtatcaatcagaggtgcc
tcaactgtgaccgcaagctgttccacaactgcttctacaactgtcacctctcctagtact
actgctgctgccacaccacacacacgcatagcaactgtctccacagtagctacagggggt
agtaggcgtcccagtgcagagcatcatccaccacctagtgcaaccaagagtggtgagtcc
caggagacagtggtagattctgggattgaggagctggacagccgaagcagcagtgatcat
cacttagacagcattcttgcactcagtggtagtggggtcagagagaggttggaacgagca
gggatgagtagcataggtggaattggagggagagatggtgcaactgaggttgacaggaca
agtggggcagactttttagagtcttacatgagctaccttgatgggcagacttttgaaatg
cacaatgccaaagccgctagcactgcatccacctacccaaaaacacagaggtacagagaa
ggcacccgggctggagatcttcgacgccagaccagcacagcacctcctgcataccaccgt
cgtagagaggaggaagaggaagaggatgaggccgaggaggtagaggaggaggatttgagt
gcccgtgatggctatgggatgagggaagggccagggattgctcgctcctctgtaatgtac
tttgaccggccccgcactccagagataaaaccactgtggggagatgggtcgactggagca
tcacagaccatgggggagggagggggccagatagtgggaacatatgtggagccacgtaaa
ctacatcctcccatgactggtatgaaagcaaacatcattaatgaactaagcaccaaatta
cagcagagaagtaaaggaacagagaactggggggcccagagatcattgagcagacatagg
ttctcagaggactcaacaggtgcactgagtcctccctctgtccgctctagctccccatct
ccagttcagctctctcagcctgccttgtctccctctcccactccttcctcccagccactt
tactcaaactgggctcgatctccttcccctcagccccctgctgcctcatcccagccccct
ccccgatcccattcacctgtttccccttcatcatattcaccataccccacctcacccaaa
caccggcctgtttatcgcaccaaagctctggagttccaatttattcccagtcgagagtca
cgaaagtcagagtcgcatcatgcccagcgcagacgagcacccagccctttaatttctcca
tctgaccgtcccaagcttggccctccccgcccctcttcccttcctattctccccactaca
cccctctatagcagcctgtatgaccttcgtggttctattactccaccctcacctgccaat
ccccttggggacccctacttttccccctccccccctctatttgccccctcgggtgctccc
cctcctccaaattcctctctggtggtctcacggtccctgtcacccactcacttcctgtca
gggacttcatccccacctctccaccccattcctccacccacttgcctgagttacccccat
cttccacccccctcacccacaaagccctttgcctcaaaacctctcccatactggaccaag
tatgatgttgcagattggctgggctacctgaacctgggtgaacacagggagcgattctta
gacaatgaaattgatggcacgcacctgccctctcttaccaaggatgactacctggacctg
ggtgtgacccgagttggccatcgcatgaacatagagagggcgctcaggagagttatggac
aggctgtcttctagcactttccccatttctgctctctctcctcgaaatggacggacaaac
agaaggagagatgaggccaaccggagttga
DBGET
integrated database retrieval system
