Danio rerio (zebrafish): 569007
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Entry
569007 CDS
T01004
Symbol
si:ch211-283g2.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
569007 (si:ch211-283g2.1)
Transporters [BR:
dre02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
569007 (si:ch211-283g2.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
569007
NCBI-ProteinID:
XP_017211707
ZFIN:
ZDB-GENE-060531-57
Ensembl:
ENSDARG00000046091
UniProt:
E9QDS8
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Position
5:complement(4147835..4204618)
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AA seq
581 aa
AA seq
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MAAKEEAGRPTWSRQIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLLPYLLMLVVLGI
PLLHMELTLGQYLRRGPVLALAKACPLFKGVGMATVAISFIMCTYYNIIITWALYYMFSS
FRSELLWQNCNNTWNTVNCTDQVTNSSSSSTASQQFFNYKVLERTSGVEETGTLRWELFL
LLLLAWILVYLCIFKGVKSTGKVVYFTALFPYVILLALLINNVQLPGALDGIKFFIIPEW
DKLLNVQVWINAAAQIFNSIGIGFGSLMAMASYNNYNNNVLKDTLAIAITNSLTSIFAGF
VIFSAFGYMSHLQNVPVSEIAVDGPGLVLVVYPQAFVTMPVAPLWAFLFFFMLLCLGLDS
QFAMVEVMVTSLLDSYSKPILKHLKRKEFLVLLVCGAAFLLGIPNVMQVGIYVFQLMDHY
TAIVSIMFLAFFEVVGVCWCYGVKRLSSNLVEMTGKRPSIFFRICWWVICPALITVILVF
SVIQFKPARYEDYVYPPWAQGVGWLIALASIIWIPLAAVHTLWVLPGSFTEKFKKSITPF
SLDEDDSPYYQQKGGIMETIPNIAVISPIAPLPDKPIQTNL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaaagaggaagccggcagacccacatggagcaggcagatcgagtttacgctg
gccggcatcggctgtgctgtgggactgggcaacatctggaggtttccatacctgtgttac
agaagcggaggaggtgcgtttctgttgccgtacctgctgatgctggtggtgctggggatc
ccactgcttcacatggagctcactctgggccagtatctgagaagagggcccgtcctggcc
ctggccaaagcctgtccactgttcaaaggtgttggcatggcaacggtggccatctctttc
atcatgtgcacatactataatataatcatcacgtgggccctctactacatgttcagctct
tttcggagtgagttgctttggcaaaactgcaacaacacgtggaacacggtgaactgcacc
gaccaagtgaccaacagctcctcgtcctccaccgccagccagcagttcttcaactataag
gtgctggagagaaccagtggtgtggaggagacgggcaccttgaggtgggagctcttcctc
ctgctgctgctggcctggatccttgtctacctctgtatctttaaaggagtcaaatccact
gggaaggttgtatatttcactgctctgtttccatacgtgattcttctggctctgctgatc
aataacgtgcagctgccgggagctttagacggcatcaaattcttcatcatacccgagtgg
gacaagctgctcaacgtgcaggtatggattaatgcagcagctcaaatctttaactccatt
gggattggctttggctcgctcatggcgatggccagctacaacaactacaataacaatgtc
ctcaaagacactctggccatcgccatcacaaactccctgactagtattttcgctggattt
gtcattttttctgcgtttggctacatgtcgcaccttcagaatgtgccggtcagtgaaatc
gcagttgacggtccgggtttagtgcttgtggtttacccacaagcctttgtgacgatgcct
gttgctcctctttgggcctttctcttctttttcatgctactctgcctcggcctcgacagt
cagttcgctatggtggaggtgatggtgaccagtctgctggacagttacagtaaacccata
ctgaagcacctcaaacgcaaggagtttcttgtgcttttagtttgtggtgcggcgtttctt
ttgggtatccctaatgtcatgcaggttgggatctatgtgttccagctgatggatcattac
acagccatcgtctccatcatgttcctggccttctttgaggtggttggtgtttgctggtgt
tatggtgtcaagcggctgtccagtaatttagtagagatgacaggaaagagacccagcatt
ttcttcaggatctgctggtgggtcatttgtcctgcgttgataaccgtgatcctagtgttc
tcagtcattcagttcaaaccagcgcggtatgaggattatgtgtacccaccgtgggctcag
ggtgttggctggctcatcgccctggcgtccatcatctggattcccctagcagcagtgcac
acgctctgggttctgcccggatccttcactgagaagtttaaaaagtccatcacaccattt
tctctggatgaggatgatagcccatattaccagcagaaaggtggaattatggagacgatt
cccaacatcgctgtcatcagtccgattgcaccgctgcctgataaaccaatccagactaat
ttatga
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