Danio rerio (zebrafish): 569055
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Entry
569055 CDS
T01004
Symbol
cnot4a
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
569055 (cnot4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
569055 (cnot4a)
03019 Messenger RNA biogenesis [BR:
dre03019
]
569055 (cnot4a)
04121 Ubiquitin system [BR:
dre04121
]
569055 (cnot4a)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
569055 (cnot4a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
569055 (cnot4a)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
569055 (cnot4a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
569055 (cnot4a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
569055 (cnot4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-C3HC4_2
zf-UDP
zf-RING_2
zf-CCCH_2
Nup35_RRM_2
Torus
Sos7
DZR_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
569055
NCBI-ProteinID:
XP_697509
ZFIN:
ZDB-GENE-090313-262
Ensembl:
ENSDARG00000007045
UniProt:
A0A286YAE5
LinkDB
All DBs
Position
25:complement(21257606..21278699)
Genome browser
AA seq
772 aa
AA seq
DB search
MSRSPELKEDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKLNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADAEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVI
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKANPTFLLTSTCGEKSKSKSNSTQRPNSTNKEGWPSLQNYGKMVNGLTTEHRKSP
PLLDCLTDSDHMTPDEPDLEQGTEQNTGLPPFPSALEPTSPIDKPSEPISIGNGENISQT
SSSDSPSPPPGLTKPSLVVPISVAELTARSPFEGAAAESQSLFSDNSNFRHPNPIPSGLP
PFSNSPQGASDWPMTPEPQSLFTSETIPVSSSTDWQAAFGFGSSAKQQQQDDDLGFDPFD
VTRKALADLIEKELSVQEHSPLSPNPSSHQTGLPNGQQRFPHLQHRGLYNSFSLPQHMAA
RHPWMGIPTRNNLTHLNHTATAAAHSHFLDLSMPAQHHSTGLGGIPISENNGSVESINVK
EWQDGLRALLPNININFGGLPNSTSSSSSSSTSSVNHIGVPIGSAGISHSLSWDSTASWM
DPAIITGIPASTGNSLDCLQDDNPPHWLKSLQALTEMDGPPSSSALPQPPHTGLLDAAAH
LSLHRAAWAPYLPPPTLTPNQFHSPPPGFQTAFRPQAQTATDILQSAGIDRH
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagtccagagctgaaagaagaccccatggagtgcccactgtgcatggaacct
ctggagattgatgatgtcaacttcttcccctgcacctgcggctaccaaatctgccgtttc
tgctggcatcgtatccgcacagatgagaatggcctctgccctgcttgcagaaagccttac
ccggaggatcctgcagtatacaagccactgtcacaagaggagattcagaggataaagaac
gagaagaagcagaagctgaacgagaagaagcagaaggtgacggagaaccgcaagcatctg
gccagcgtccgtgtggtgcagcggaacctggtgttcgttgtagggctttctcaaaggctt
gctgatgcagaggttctaaagcgtccagagtattttggcaagtttggaaaaattcataaa
gtggtcatcaataacagcacgtcatatgcaggttcacagggtcctagtgctagtgcctat
gtaacttacattcgttcagaggatgcccttagagcaatacaatgtgtaaacaatgtcata
gtggacggtagaacgctcaaggcttcattaggtacaacaaagtactgcagctactttctt
aaaagcatgcagtgtcctaaaccagactgcatgtatttacatgaacttggcgatgaggca
gctagttttacaaaagaagaaatgcaggctgggaaacatcaagaatatgaacaaaagtta
ctccaagacctttacaaagcaaaccccacctttttactaacctcaacatgtggggagaag
tcaaagagcaaatccaattccactcagcggcccaatagcaccaataaagaaggatggccc
tcattacagaattatgggaaaatggtgaacggtttaaccacagagcatcgtaagtctcct
cctctattagactgcctaacagactccgatcacatgactccagacgaaccagaccttgaa
cagggaacagagcaaaacacaggcctcccacccttcccatcagccttagagcctaccagt
ccgattgacaaaccatcagaacccataagtataggaaacggggaaaatatatcacagaca
tccagtagcgattccccttctcctccacctggccttactaaacccagcctcgtcgtgccc
atcagtgtggctgaactcacagcacggtcaccctttgagggggctgcagcagagtctcaa
tctcttttctcagacaacagcaatttcagacatcccaaccccatccccagcggcctgccc
cccttttccaattcaccacagggagcctccgattggcccatgactccagaaccacagagc
cttttcacctcagaaactatccctgtgtcgtcctcaactgattggcaggcagcctttggt
tttggctcctcagccaagcagcagcagcaggacgatgatcttggctttgacccatttgac
gtcacacggaaggctctggccgacctcatagagaaagagctgtcagtccaggagcattcc
cccctctcccccaacccctcctctcatcagaccggcctccccaatggccaacagcgcttt
cctcatctccagcacagaggcctctataactccttcagtctaccccaacacatggccgca
cgtcacccctggatgggcattcctacccgcaataacctcacacacttaaaccacacggcc
accgcagctgcacacagccatttcttagacctgagcatgccagcccagcaccacagcacc
ggtcttggggggattcctatatcagaaaacaacggctctgtggaaagcattaatgtgaaa
gagtggcaggatggactacgtgcactcctaccaaatatcaacatcaacttcggaggcctc
ccgaactctacctcttcctcgtcctcttcctccacttccagtgtgaatcacatcggggtg
ccaataggctcggctggaatctcgcacagcctcagttgggacagtacggccagttggatg
gaccccgccatcatcacaggtattccggcatccacagggaacagtttggactgtctccag
gatgacaatcccccacactggctcaagtctctgcaggcactcacagagatggacggccca
cccagttccagcgcacttccacagcccccacacactggtctcctagacgcggcggcccac
ctctccttacacagagcagcctgggctccttacctccctcctcccacactcaccccaaat
cagttccactctccacctccaggctttcagacagccttcagaccccaagcgcagacggcc
acagacatcctacagagtgccggcattgaccgtcactaa
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