Danio rerio (zebrafish): 569072
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Entry
569072 CDS
T01004
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
569072 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
569072 (dhx36)
03012 Translation factors [BR:
dre03012
]
569072 (dhx36)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
569072 (dhx36)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
569072 (dhx36)
Translation factors [BR:
dre03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
569072 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
569072
NCBI-ProteinID:
NP_001122016
ZFIN:
ZDB-GENE-050419-20
Ensembl:
ENSDARG00000101059
UniProt:
A0A8M1NHJ3
LinkDB
All DBs
Position
18:31610632..31838238
Genome browser
AA seq
1037 aa
AA seq
DB search
MSLGYGNRHGRRGGGRKFGDVGSRWDAGASGVGDCTKSSEWDSVFEHGLGGCRRGGRGKH
PSHLKGREIGLWYAKWGGIKKSEAERRSRAVVHMDESREKHITQLLNTVQRDLGRDVHPS
TSQSWRNKDEARGHSYFDGDDPVETQNIMPLPKVEPKDEKQEDAIKSRASLKEELNETNL
EYLLQDVVQIPFLDEELKKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLV
ISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEG
KSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILI
TIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELLGF
QPRYKQRKPHYRKRNNHGSSARPEKGKIEAKYHESWPCYARTLRDRFSDTTIEVLGMMDD
DDNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPL
HSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF
DTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLE
ELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMP
VEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSDHL
SIVNAFLGWEDAKRRGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPK
DPSSNINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHPKSVNA
EETQFQYKWLVYHLKMKTTSIFLYDCTEVSPFSLLFFGGNISIQRDQDQDTIAVDEWIVF
QSPGRIAHLVKDLKKELDVLLEEKIKSPHPVDWKDQQSKDCAVISAIIDLITTQETPAGD
PSKDSQPVYQRSDCLFE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgggtacggtaatagacatggtcgaagaggtgggggtcgaaagttcggagat
gtggggtccaggtgggatgcaggggccagtggtgttggagattgcacgaagagctctgag
tgggactcagtgttcgagcatggacttggagggtgtcgaagaggaggaagaggcaaacat
ccatctcatttaaagggtcgagaaataggactgtggtatgccaaatggggaggaattaaa
aagtccgaggcagagaggagatctagggctgttgttcatatggatgaatcacgagagaag
cacattactcagttgctgaatactgtccagagagatctgggtagagatgtgcatccttcc
acatctcagagttggaggaacaaggatgaggcccgtggtcacagttactttgatggagat
gatcctgtagaaactcaaaacattatgccattgccaaaagttgagcctaaagatgaaaaa
caggaggatgcgatcaagtcaagagcaagtttgaaagaggaacttaatgaaactaattta
gaatacttacttcaagatgttgtgcagataccttttttggatgaggaacttaagaaagat
caacagaagaaggaagataatgctgcatacattgaaatgttgaaattcaggaagaagtta
ccttcttatgggatgagagaggagttggttaggctgatcagtgctaaccgggttctggta
atcagtggagagacaggctgtggtaaaactacccaggtcactcagttcatccttgatgat
tttatccagaggggccagggctctctctgcagagtggtttgcacacagccacggcgtatc
agtgccatatctgttgcagagagagtggctgtggaacgcgcagagccagtgggagagggg
aagtcttgtggatatcagattcgtctgcagagtcggttacctcggaagcaaggctcattg
ttgtattgtacaacaggtgttattcttcagtggcttcactcagatccatatctttctagc
ataacccatctggtcctggatgaaattcatgagaggagtgttcagtctgatattcttatc
accatcgtgaaggacctgttaactgctcgtgatgacctaaaagtagtcctcatgagtgcc
acacttaatgctgagaaattcagcaagtatttcaataattgtcccatgatccatattcct
ggatacacatttccagtcacagagtacttactggaggatgtggtggaattgcttggattc
cagccacggtacaagcaacgtaaaccacattataggaaaaggaataatcatggctcaagt
gcacggcctgagaaaggcaaaatagaggccaaatatcatgagagctggccctgctatgcc
cgtacacttagagatcgattttcagacactaccattgaagtgctgggtatgatggatgat
gatgacaacatcgatctggagcttactgctgcgctgattcgtcacattgcggtgaatgag
aatgaaggagcgattctagtgtttcttcctggatgggacaatatcagcaccttgaatgat
ttgctcatgtctgaccagatgtttaagtcaggtagatatcggtttatcatcatccctctc
cactctctgatgcccacggtctctcaaacccaagttatttctctttttcctcaggttttc
aaaaagccacccccgggagtgcgcaagattgtaattgctactaacattgcagaaaccagt
atcactatagatgatgttgtgtatgtgatcgatggagggaagattaaagaaacacatttt
gacacccagaacaatataaggaccatgacagcagagtgggtgagcatagccaatgccaaa
cagaggaagggccgtgctggcagagtgtccccaggaaaatgctatcatctgtataatgga
ctcagggccagcctcttggataactaccagttacctgagatccaacgcactccactggaa
gagctttgcttacaaattaaggtactgaaattgggccccattgcaacttttctgcagaaa
actatggatcctccctcagacagagcaatagagctggctatcacacaccttgtagacctg
aatgccttggacagagatgaaaagttgactcctctaggatttcatctcgcccgtatgcct
gtagagcctcacattggaaagatgattttgtttggggcacttctgggctgtttggacccc
gtgcttaccattgcagccagccttagctttaaagatcccttcttcataccactgggaaag
gagaagattgcagaccaaaggagaaagatgttttcccagaactcaagaagtgatcatctg
agtattgtcaatgctttcttgggctgggaggatgctaagagacgaggaagcaggtttgag
agggaatactgctgggacaactttctgtctgccaatacgctacagatgcttcagaatatg
aagggtcagtttgcagagcatcttttgagggctggctttgtgaatagtaaggaccccaaa
gatcccagctctaacatcaactcggagaacaagaagctggtcaaggcagtgattgtagca
ggtctgtaccctaaagtggccaagatttcccccagccataataagaagagacctatgcct
gtgaaggtgtatactaaggctgatgggaaagtctgtatccatccaaaatccgtcaatgca
gaggaaactcagtttcaatacaagtggcttgtctatcacctgaagatgaaaaccaccagt
atcttcctctatgactgcactgaggtatctccattttcattgctgttctttggagggaat
atttctatccagagagaccaggaccaggatacgattgcagtggatgagtggattgtgttt
cagtccccagggcgcattgcccaccttgtcaaggacctgaaaaaggagttggatgtatta
ctggaggaaaagataaagagtccacatcctgtggactggaaagaccagcagtcgaaagat
tgtgcagtaatctctgccataatcgacctcatcactacacaggaaacccctgctggagac
ccctcgaaagatagccaacctgtgtatcaacgatcagattgtttatttgaatga
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integrated database retrieval system
