Danio rerio (zebrafish): 569118
Help
Entry
569118 CDS
T01004
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
569118 (ddx10)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
569118 (ddx10)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
90S particles
Helicases
569118 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
569118
NCBI-ProteinID:
XP_001922220
ZFIN:
ZDB-GENE-071022-2
Ensembl:
ENSDARG00000061865
UniProt:
F8W3D4
LinkDB
All DBs
Position
21:25120582..25171803
Genome browser
AA seq
864 aa
AA seq
DB search
MRDKKVKEKTNITDDPVKNFEKWKKKYAKTKTKVKRSQKSKVKKRDWEVERENIKKLVDK
YSEINPKEAVKFSDFPLSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGK
TLAFLIPVLECLYREQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGK
DLKDESEKIHRTNIIICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAI
VENLPKSRQTLLFSATQTRSVKDLARLSLKDPEYVWVHEQAKFSTPATLEQNYVVCELHQ
KVNMLYSFLRSHLQKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKRVEVYN
DFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGEALLVL
LPSEEKGMISQLQEKKVPINKIQVNPEKLMSVQQKLEAFLAQEKEQKERAQRCFVSYLRS
VYLMKNKDVFDVLQLKLPEYAMSLGLAVAPRVRFLLKAQQQRRTAAQDDSSTAGHQSEDE
LQSFTAQLQQQKTKSEPSQSEEEEDDDDDDDEGDDDDEDIKDQDSLKPLSLLCGFNEEDD
DDDQREADLLTVKCKDVFNVKEEIKDEEDADADAKNRKQKESKFKDAKKIQKRNLKVNTK
KVFTEDGKVVQQWPPLQRTVVPDEEDDDDVMTGINVEAAKERLRREDQAFDKMEYRRKIK
EKHREKRLKEKAARREASKQHKEEKRKADGDDDDNDDDEDEEEVVAYLSGADEEFDPSTL
PDPDKVHNSESSEEDGESSDAGGKKRSFSSEDEDDDDDDDDDEEQTTQKSRKKPRTEPTV
TALDTGLSLAEDEELVLHLLSSHS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcgggataaaaaggttaaagagaagacaaatataaccgatgaccctgtgaagaatttt
gagaaatggaaaaagaagtatgccaaaacgaaaaccaaagtcaaacgatctcagaaaagc
aaggtgaagaaacgcgactgggaggtggagagagaaaacataaagaaactggtggataaa
tactccgagatcaatcccaaagaggcggtgaagttctctgatttcccactgtcaaaaaag
accctaaagggtcttcttgaagctcagtacaggcagcctacagagattcagagacagacc
attggctttgctttgcaaggcagagatgttcttggtgctgccaagacgggctctggaaag
actttggcctttctcatcccagtgttggagtgtttgtatcgtgaacagtggactgcgatg
gacggcctcggcgctctcatcatctctcccacacgagagctggcctatcagacctttgag
gtgttgaggaaggtcggcaagaaccatgagttttctgctggccttgtgattggtggaaag
gatctgaaagatgaatctgagaagatccatcgcacaaatatcattatctgcacaccagga
cgtttactgcagcacatggatgaaacggcaacctttcatgcttcagatctacacatgctt
gtactggatgaagccgacaggattctggacatgggttttgctgacacactcaatgctatt
gttgaaaatctcccgaaatctcgacagacgcttctcttttccgccactcagaccaggtct
gtcaaagatttggctcgactgagcctgaaggacccagagtatgtgtgggtccacgagcag
gccaagttcagtactccagccaccctcgagcagaactacgtggtctgtgagctgcaccag
aaagtcaacatgctctactcatttttgaggagtcaccttcagaaaaagatcatagtgttt
tttgcgtgctgcaaagaggttcagtatctgtttcggatcttctgtcgcttgcgtccgggt
atttccgtgcttgctttgcatggcaaacagcaacagatgaaaagggtggaggtgtacaat
gactttgtccgcaagacctctgcagtcctctttgccacagatatcgctgccagaggactt
gactttcctgctgtaaactgggtgcttcagtttgactgtcctgaagatgcaaacacatat
attcacagagttggcagaacagcaaggtataaagagggaggcgaggctcttcttgtcctg
ttgccttcagaagagaaaggcatgatttcacaacttcaagagaaaaaagttcccattaat
aaaatccaggtgaacccagaaaagttgatgtctgttcagcagaagttggaggccttcctg
gcgcaggaaaaagagcagaaagagcgagcacagaggtgttttgtgtcctacctccgctcc
gtctatctgatgaagaacaaagatgtctttgatgtgttacagctcaaactccctgaatat
gccatgtctctgggtttggcggtggcaccacgggtccgtttcctcctaaaggcccagcag
cagagaagaacagcagcacaggacgacagcagcactgcaggacaccagtctgaagatgag
ctgcagagtttcacagctcaactccaacaacagaagaccaaatctgagccctcacagtct
gaagaagaggaagatgatgatgacgatgatgatgaaggtgatgatgatgatgaagatatt
aaggaccaggattcattaaagcctctttctctactctgtggctttaatgaagaggatgat
gatgatgaccagagagaagcagacctgctgacagtcaagtgtaaagatgtgttcaatgtc
aaagaagagatcaaggatgaggaggacgcagatgctgatgccaagaataggaaacaaaaa
gagtccaagttcaaagatgccaagaaaatacagaagagaaacctcaaggttaacaccaag
aaggtcttcactgaagacggaaaggtggtgcagcagtggcctcctctgcaaaggactgtg
gtaccagatgaagaggatgatgatgatgtgatgactggcatcaatgtagaagcagccaaa
gagcggctccgcagagaagaccaggcgttcgacaagatggagtaccgtcgtaaaatcaag
gaaaaacacagggagaaaagactgaaggagaaagcagctcgaagagaggcgagcaaacag
cataaagaggagaaaaggaaagctgatggtgatgacgacgataatgatgatgacgaggat
gaagaggaggtggtagcatatctgtcaggtgctgatgaagaatttgaccccagcactctt
cctgacccggacaaagtgcacaactccgagtcctctgaggaagatggcgagtcatcagat
gctggtggcaaaaagagaagcttcagcagtgaggatgaagatgatgatgatgatgatgat
gatgatgaagaacaaacaacacagaaaagcagaaagaagcccaggacagagcccacagtc
accgctctggacactggcctctcactggctgaagacgaggagcttgtgctgcatttactc
tccagtcacagctag
DBGET
integrated database retrieval system
