KEGG   Danio rerio (zebrafish): 569210
Entry
569210            CDS       T01004                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2
  KO
K23625  ataxin 2/2L
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    569210 (atxn2)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     569210 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 569210
NCBI-ProteinID: NP_001121821
ZFIN: ZDB-GENE-060526-217
Ensembl: ENSDARG00000052897
UniProt: A2CF31
LinkDB
Position
5:complement(41645308..41709250)
AA seq 1112 aa
MSMKPQAGGNRKPGGSNSGAAAASGTGGAGGGVGRQNMGRGRNNAKGPSTAVAFNGVYAN
MRMVHVLTSVVGTKCELKVKNGLIYEGVFKTYGPECDIVLDAAHRKSVEPNAGPRREDIV
ESIIFKSSDVVVVHFKDVDLNYAKKDNFTDSAVSARVNGEHKEKDLEPWDGGEQHISGSM
ESLDTDLSNGWDPDEMFKYNEETYGVKSTYDSSLSSYTVPLERDNSEEFLKREARASQLA
EEIEASATYKARVALENDDRSEEEKYTAVVRGERELHSLNRENKYIPPSQRNREAGMSWG
AGRQVSPRLVQCSSGPPTPRSGPHDYNTIDQRVVNGGAQPWPSRCPSPSSRPPSRYQSGP
TNSLPPRAATPTRPPSRPPSRPSRPLSHPSAHGTSGPLSNMPKRLSSEGPPRMSPKSQRT
PRPHRVASCRGGGPPPSDYMSQGASVEVSAPPPTRNSPSGGTWSSVVSGAHRPRSPRQNS
IGGEAPNSSCLSSPQAGTVPVDSVTASTTATSPTAANPATNLEASPIEEAKESRVLETRQ
NSPNANKENVKPIEASPGIARSIGKGSPSMASDHRKQIDNLKKFSAAFRLQPSSSSDPGF
EAMGTKPPRDLGEKPKDQAAEKGSVDSTGLKASTESSISEETSSPVSVTSAGSKAGTPSL
SPSSAVPEQKRGPDVTSQGVQTTSPLANAVTKDKDEKEDKNDPVAESVRKSTLNPNAKEF
NPRVFCSPPKPATTPTLTRPQGQPSPSIVVQQPPTVYGQTMFQMYPLTPVSPGVQPPAMY
HVQVPHMTMSQTKSYRSGKVQNMPQQRPDQHHPPGTSTMMHSATAAGPPIVAPSPAYSTQ
YFTCSPQQFASQPLVQQMPHYQSQAQHVFSPVIQGSARMITPPTHAQPSLVSSSTTQYGE
QTHTMYGKNFPSTMTKLNKPTYSTPIPQQFPHPSSTLHPHPQHPQPSATPTGQPQQGTQH
GGSHPAPSPVQHQQHQAAAAAAAQAIHLGNPQQQQMYSALAATPPSMTPGPNPQSPQASF
PSAQQAVYIHPQHGYNPNHMAHVQQAHMQSGMVPPHHGNPSHPPTMMLMATQAPAGPQPA
LPQGTLNPIPVSSGTHFYSTLTPVQAHHQQQL
NT seq 3339 nt   +upstreamnt  +downstreamnt
atgtccatgaagccgcaggccggtggtaatcgcaaacccggcggaagcaacagcggagcc
gctgcggcctccggtaccgggggagcaggaggaggcgtcggacgccagaacatgggcaga
ggacgcaacaatgccaaaggaccctctactgcagtggccttcaatggagtttatgcaaac
atgaggatggttcatgttttgacctcagttgtgggaaccaaatgtgaacttaaggttaaa
aatggcctgatctatgaaggggtttttaaaacatatggcccagagtgtgatattgtcttg
gatgctgcacacaggaagagtgtagaacctaatgcgggccctcgccgtgaggatattgtg
gagagcatcatcttcaagtcctcagatgtagtggtagttcatttcaaagatgtggacctc
aactatgccaagaaagataacttcacagatagtgcagtaagtgcccgtgtaaatggagag
cacaaagagaaggatttggagccctgggatggaggggagcagcacatctcaggcagtatg
gaatctcttgacactgatctgtcaaatggatgggatcctgatgagatgtttaaatacaat
gaggagacatatggcgtaaagtccacgtatgacagcagcttgtcctcatacacggttcct
ttggagcgggacaactctgaggagttcctcaagcgtgaggctcgtgcatcacagctggcg
gaggagattgaagccagtgctacctacaaagctcgtgtggcactggagaatgacgaccgc
tcagaagaagagaaatacactgctgtggttcgtggagagagggagcttcacagcctaaac
agggagaacaaatacattcctcctagtcagaggaacagagaagcggggatgtcatgggga
gctggtcgtcaagtctcacccagattggttcaatgtagctctgggccacccacacccaga
tccggacctcacgactacaacacgatagatcagcgtgtggtaaatggaggtgcacaacct
tggccctcgcgctgcccatctccctcctctcgccctccatcccgttaccagtcaggcccc
accaactctctcccgccccgggcagcaacgcccacccggcctccctccagacccccatcc
aggccctcacggcccctgtctcacccctctgctcatggcacttcaggacccttgtccaac
atgccaaaacgcctgtcctcagaaggtcctccaagaatgtcgcctaagtcacaacgaact
cctagacctcatagagtggcctcttgtcggggtggtgggccgcctccatctgattatatg
tcccaaggtgcatcggtggaggtttcagctccccctcctactcgcaacagcccttctggg
ggaacctggtcatctgtcgtcagtggtgcgcacagacctcgttctcctcgacagaatagc
attggcggtgaagctccgaactcctcctgcttgtcttcccctcaggctggtacagtgcca
gtcgactcggtgaccgcttcaacgacagcgacatcacccacagctgccaacccggccacc
aacttggaagcatctccaatagaagaggccaaagaatcaagagtactagaaacaaggcag
aattctcccaatgccaacaaggagaatgttaagcctattgaagcttctccaggcattgct
cgatccatcggcaaggggtctcccagcatggcttcagatcacagaaaacaaatagataat
ttaaagaaattcagtgcagcttttaggttgcagcctagctcaagttcagatccaggtttt
gaagctatggggaccaagcctccgcgggacctcggagaaaagccaaaggatcaagcagct
gaaaagggttcagttgattcgacaggactcaaagcctctaccgagtccagcattagtgaa
gaaacctccagccctgtgagcgtcacctcagcaggtagtaaagcaggcaccccttcgctc
tctccttcctctgctgtcccagagcagaagcgagggcctgatgtgacgtcccagggcgtg
cagaccacctcgcctctggccaatgctgtgacaaaagataaggatgagaaggaggacaag
aacgaccctgtagcagagagtgttagaaaatcaactctcaatcccaatgccaaggagttc
aacccaagagttttttgctcccctcccaaaccagcaacaacccccactctgacccgaccc
cagggtcaacccagcccttccatcgttgtacagcagcctcctacggtctacggccagacc
atgttccagatgtacccgctgacaccagtcagtcctggcgttcagcctccagccatgtac
catgttcaggttcctcatatgaccatgagccagaccaagtcctacagatcaggtaaagtt
cagaacatgccacagcaaagaccagaccagcatcacccgcctggcacgtctacaatgatg
cattcagctacagctgccgggccacctattgtggcaccgagtccagcttactctactcag
tacttcacctgtagcccacagcagtttgctagtcagccactggtacagcagatgccccac
taccagtcccaggctcagcatgtgttcagtccagtgattcagggcagtgcgaggatgatc
acccctcctactcacgctcagcccagcctggtctcttcctccaccactcagtatggtgag
cagacgcatactatgtatggtaagaacttccccagcacaatgactaagctcaacaagccc
acatacagtaccccaattcctcagcagtttccccatccaagctccaccctgcaccctcat
ccacagcaccctcagccctctgccaccccgacaggacagccccagcagggtacccagcac
gggggcagtcacccggcccccagccccgttcagcatcaacagcatcaggcggccgccgct
gctgcagctcaggccatccacctgggcaacccacagcagcagcagatgtactctgctctg
gcagccaccccaccctccatgacccccggcccaaacccacagtcccctcaggccagcttc
ccctcagcacagcaggccgtctatatccacccgcagcatgggtacaaccctaaccatatg
gctcatgtgcagcaggcccacatgcagtcagggatggtgccccctcatcatgggaatcct
tcacacccccccactatgatgttgatggccactcaggctcctgcaggcccccagcctgcg
ctgccacagggcaccctcaaccccatcccagtgtcctcaggcacacacttctactccaca
ctcacccctgtgcaagctcaccatcagcagcagctgtag

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