Danio rerio (zebrafish): 569404
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Entry
569404 CDS
T01004
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
569404 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
569404 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
569404 (pdlim4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
569404
NCBI-ProteinID:
NP_001036161
ZFIN:
ZDB-GENE-070308-5
Ensembl:
ENSDARG00000068973
UniProt:
Q0PWB9
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All DBs
Position
21:complement(47485074..47550191)
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AA seq
349 aa
AA seq
DB search
MSHTVTLSGPSPWGFRLVGGRDFSTPLTISRITPASKAAQSNLSPGDTILAINGESTESM
THMEAQNRIKACTDQLVLAICRSGKAWSPTGMEELKTSPFSPTLESDSQTFRPISSGYSP
TPKSPSPKSPITGAVPYNNGGSRPVYNNPAGLYSHNNGNGALPKQMSGLSLGSPHSFSPE
PPVNSSGNRNGFDTQSDVYRMLLDYEEPVSAPKQSGSFKYLQGILEAEDGGVSPVDRSGV
RGLRSPVKSPVPKLGSPITAPLAPIPGLQNLPQCTRCANGIVGVIVKARDKLYHPDCFMC
DDCGLNLKQRGYFFIDDNLYCETHAKARVQPPEGYDVVAVYPNSKVELV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacactgtgactctcagcggtccctcgccctggggttttcggctggtgggtgga
cgagacttcagcacaccgctcaccatttccagaataacacctgcgagcaaagcggcgcag
agcaacctgagtcctggagacaccatcctggccatcaatggagaaagcacagagagcatg
acgcacatggaggctcagaaccgcattaaagcctgcacagatcagctggtgctggccatc
tgcagatctggcaaggcttggtctccaactggaatggaagaactcaagacaagtccattc
agcccaacactggagtctgattcacagactttccgaccaatcagcagtggctacagtcca
actcccaaaagtccgtcgcccaagagcccaatcactggtgctgtgccttacaacaatggt
ggatccagaccagtgtacaacaacccagcaggactttattcccacaacaacggcaacggt
gccctgccgaagcagatgtcaggcctcagcctgggctctcctcacagttttagccctgag
ccgccagtgaattcatcaggcaaccgcaacggtttcgacacacagtctgacgtctacagg
atgctcctggactatgaggaaccggtttcagctcccaaacaatccggctcctttaaatac
ctgcagggaatcctggaagctgaggatgggggagtctcgccggtggacagatctggggtc
agaggcttgcgttcccctgttaaatcacccgtgccgaagctgggcagccctattacagcc
cctctggcacccattcctggcctacagaaccttcctcagtgcacacgctgcgcaaacggc
attgtgggagtcatcgtgaaggcccgagacaagctctaccaccccgactgcttcatgtgt
gacgactgcggcctcaacctgaagcagagaggatatttcttcatcgatgacaatctgtat
tgtgagacccacgccaaggcccgcgtccagcctcctgagggctacgacgtagtggccgtt
tatcccaactctaaagtggaactggtctaa
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