Danio rerio (zebrafish): 569437
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Entry
569437 CDS
T01004
Symbol
cntn3a.1
Name
(RefSeq) contactin-4 isoform X2
KO
K06761
contactin 3/4/5/6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
569437 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
569437 (cntn3a.1)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
Contactins
569437 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
Others
569437 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
Tissue_fac
fn3_2
Herpes_gE_N
Fn3_nematode
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
569437
NCBI-ProteinID:
XP_073795991
ZFIN:
ZDB-GENE-081030-10
Ensembl:
ENSDARG00000062880
LinkDB
All DBs
Position
23:11785425..11978669
Genome browser
AA seq
1027 aa
AA seq
DB search
MGLSWKLLVLQLFMGCLSDGSGPLRPVFTKQPGSIVFPLHLNEPSREVTFSCEAQGRPPP
SYRWKMNDSFISPQPGSRYSISGGNLRISQLNKEEDAGIYQCLASNSFGTILSREASLHI
AYLEEFKTQMRSPVRVREGQGVVLLCGPPAYMGELTFSWIFNEYPSFVEQDTRRFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTQNRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLA
VAKGLTVKLECFALGNPVPAISWRRPDGVPFPRKVDVSKSSGVLEIPYFQQEDAGPYECV
AENSRGKNTGKGRLSFYAPPHLVEKPQDVQRAIDESLLWECKASAKPKPSYRWLKNGEPL
ESFEDRIQVINGALSISSLTLSDTGMYQCIAENRHGRVFANAELRVIVAPDFSNSVLKAQ
TLARQGGDVLIECRPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLYT
CVARNQFGVASSAGTLVVKEPTIITSKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFN
EQLINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPP
DPPLDIRVDEVTETTSFVSWSPGPDNHSPVFAYNIQIRSPFSLGWQAAKTVPESLGGQQS
SARVVELSPWVEYEFRVLATNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGSRSELV
ITWEPVPEEQQAGPGFGYVVAFRPLGGQNWMQAAVTSPDASRYIFKNDSIPPFSPFHVKV
GVYNNKGEGPFGPVTTIYSAEEEPSRAPSRIRAKSLSASEVEVSWKPLPWSTSRTRIMGY
ELRYWSTKDRPDTASVMRTVGNRTSAVIRGLDPSSTYNIKLKAYNSAGVGPDSAVVNVTT
KRPPPSQSPVKVMWNTTDSKLILKWDHVKALENESEVMGYKVMYKQSRQTRPSVVETNST
SLELSLPVDEDYIIQIKPVSEGGEGSSSKQITIPRIAVAHAIGFAPERKALPVFVTLVLH
CTVRTFL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggggttgtcatggaaactgctggtgctgcaattattcatgggatgcctttcagacggc
agcggtcctctgaggccagttttcaccaaacagcctggaagtattgtattccctctccat
cttaatgagcccagccgggaggtcaccttcagctgtgaagcgcagggacgtccgcccccg
tcctacaggtggaaaatgaatgacagcttcatttctcctcagcctggttctcgatacagc
atctccggaggaaaccttcgaatcagccagctcaataaagaagaggatgctggtatttac
caatgtctggcctccaactctttcgggactattctcagcagagaagctagtcttcacatt
gcttatctggaggagtttaaaacccagatgaggagtccagtgcgtgtcagagagggtcag
ggggtggttcttctctgtggcccaccagcttatatgggagagttgaccttttcctggatc
ttcaacgaatatccctcattcgtcgagcaggacacgcggcgctttgtgtcacagaaaaca
ggcaacctgtacattgctaaagtggagccatcggatgtaggaaactacacctgtgtcgtg
actaacactgtgacccaaaacagagtgcaaggacctcctacacctcttattctccgcagt
gatggcataatgggagaatatgagcccaaaattgaggtccagtttcctgaagtcttggct
gtagccaaagggttgacggtcaaactggagtgcttcgctttgggaaacccagttcctgct
atcagctggagaagaccagatggagttccatttcctagaaaagtggacgttagcaaatcc
agtggagttctggagatcccctatttccaacaggaagatgcgggaccatatgaatgtgtg
gctgaaaactccagaggcaaaaatacaggaaagggacgtctctcattttacgctcctcct
catctggtggaaaagcctcaggatgtgcaaagagcaatagacgagtctctgctgtgggag
tgtaaggcaagcgccaaacccaaaccctcctacaggtggctgaagaatggagagccgctc
gagtcttttgaggacagaatccaggtgataaacggagcattgtccatcagcagtttgaca
ctgtctgatactgggatgtaccagtgtattgctgaaaaccgccacggccgagtgtttgcc
aatgctgaactcagagtcattgtggctccagatttctccaacagtgtgctgaaggcgcag
acattggctcggcagggtggagatgttttgattgagtgcaggcctcgcatgtccccacgt
gggatgatctcctggaggaagggcaaggaggccctgcgagagagccacagagtctctgtg
ctggataatggcagtctccggatttccaacatcaccaaactagatgccggtctttacact
tgcgtggccagaaaccagtttggagtggcaagcagtgcaggcacactcgtggtgaaagaa
ccaaccatcataacatccaaagccacccagctggatgtcacagttggagagagtgttgtt
atcccatgtcaggtgtcacgtgacccttcactggatgtcagattcacctggtttttcaat
gaacagctgatcaactttggaagccatgggggatattttgaaaaagttggtggtgcctct
gctggagacattatgatccgtaacattcagctaagacatgcaggaagatacacgtgtgcc
gtacagactaaagtggacagcgcgtctatagcaactgatgttgtggtacgaggtccccct
gacccaccgctggacatcagagttgatgaagtaacagagacgacatcgtttgtgtcctgg
agtccaggccctgacaaccacagtcctgtttttgcctacaacattcagatccggagcccc
ttctctctcggatggcaagcagccaaaacagtgcccgagtctctagggggacagcagtcg
tcagcccgtgtggttgagttaagcccgtgggtcgagtatgagttcagagttctggctact
aactccatcggcacaggggaacccaccaaaccctcacaaaaaatcaggaccaaggacaca
atgccaaggataaccccagccagagtcagtggaggaggtggcagccgctctgagctcgtc
atcacttgggagccagtcccagaagagcaacaagctggtccagggttcggctatgtggtc
gcttttcgccctcttggtggccaaaactggatgcaggcggcagttacatctcctgatgca
tcacgatacatcttcaaaaatgacagcatccctcctttttctccatttcatgtcaaagtg
ggagtttacaacaacaaaggagaaggtccttttggacctgtcaccactatatactctgca
gaagaagagccgagtcgtgcccccagtcgcatccgtgccaagagcctgtcagcctcagaa
gtggaggtcagctggaagcctttaccatggagcaccagcaggacacgcataatgggctat
gagctaaggtactggagtacaaaggacagaccagacacagccagtgtgatgaggactgta
ggaaacaggacatctgctgttatccgtggattagaccccagcagtacatacaacatcaaa
ctcaaagcctataacagtgctggtgttggacctgatagtgcagtggtcaatgtaaccact
aagagaccaccgccaagtcaatctccagtaaaagtcatgtggaatacaacagactccaaa
ctcatcctcaagtgggatcatgtcaaggctctggagaatgagtcggaagttatgggctat
aaggtcatgtacaagcaaagcagacagactcggcccagtgtggtggagactaacagcaca
tctcttgagctctcgctgcctgtggatgaggattacatcatccagattaaaccagtcagt
gaaggtggagaagggagcagcagcaaacagattaccatccccaggatagcagtggcacat
gcgattggatttgccccagagagaaaagcacttccagtgtttgtaacactagtactccac
tgtaccgtgaggacattcttatga
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