Danio rerio (zebrafish): 569677
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Entry
569677 CDS
T01004
Symbol
prdm1b
Name
(RefSeq) uncharacterized protein prdm1b
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
569677 (prdm1b)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
569677 (prdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
Cornifin
Motif
Other DBs
NCBI-GeneID:
569677
NCBI-ProteinID:
XP_009292755
ZFIN:
ZDB-GENE-080618-2
UniProt:
A0A8M3AL91
LinkDB
All DBs
Position
19:48215597..48287580
Genome browser
AA seq
2679 aa
AA seq
DB search
MEKKSSSSRRTLKSLFSRSEVNLSEHEPKTDSNGGSFRLFKWKKKKKSESSEDNPNTDRA
ESADGDIQDGEEQNKHKTALFGRSKKGKRSYSETDLHKPKGFIGSLTWGRKKKQNRDRVQ
DLTSNSDISGVKDHISEQEEFDNHKETEQIQACVEAVRSAPEPPCASDQSQSQHVLSDQS
TLSEEDAGFMPTAQESKAIPYIDSSDSDAYQTPPDSPNISSDAQAQPDTQYGKLSAQNSI
TSETSEYYICPGTDMKTAACTDTSTARISHDNVVSQKRSHLEHGEYSNAASLTQESYISR
PESTDSSIHESSSLFIPKSPVFSIPESSFSSDPQNPTASIPQVSSSSDPQLSTSSIPESS
FSSGPQISTSSIPQSTSTSVPQISTSSIPQSASTSVSQISTSSVPDSSSVSVPQIFISSV
PQSSSSSDPQISTSLIPEFSSSSDPQIFTSSILQSTSTSVPQISTSSIPQSSSSSVPQIS
TSSIHQSSPTSVPQMSTSSIPQGSSSSVPQISTSSIPQSSSSSVPQISTSSIPQSSPTSV
PQISTSSIPQGSSSSVPQISISSIPQSSTNSVPHSSTPLVHESSSSYIPQSSTSTMHDSF
NSDSTMTQSFSTNTNSAFNLPEDSFSHPADTISYEDSHTTSANVRNKSFIDSNVINSDPS
SPTTDICESDHVSSKPYVIVSSTLCSSRIKGNRIKTDRKPSSSNTNVSESDVTVHSTADS
GSREETPPESSCVTISKESHATDNYSSLAYATDSEKHNPAQPVLPENESNIPLSPSARAY
TIIKSTKVVTFDLSGPSDHISFDHSHRSLSNNEPDSDVETLTEILDHEGQDNNQTDTDSS
AKASSGFPNHTIPSMSLTSYPPLHLDVSDQMFSSQSLKAKTEKQQKTSRACEDQEKCLQD
ASITEDTKLQKVSEECGMLKKKEDDVLIETEKQQKTFRACEDQEEYPQHASTQSLDPVDR
INQNKSNAEITEATTLHKALEKVAMVEEKRDELYTKMEKQQKTFRAYEDQEGYLQDASTQ
RFTEKSIGESETNAERMTTTDDATSVTEDTKLQKVSEEFAMVKKKEDDVLMETEKQQKTF
RAYKDHEEHLKDISAHRFIEKSVDQDKSNAEIKVSTKLHKALEKFAMVEKQRDDLHEETE
KQQKTSRTYEDREACLQDASTQRFIEKSVDQNESNAEITEATKPHKALEKVAMVEKKTDE
LHMGTEQLKTSRAYEDREEYAQDASTQRLESIDQINQNKSNAERTTTRNDAISILDNELN
QIIEATKLHKASEDSPMLKKMSNESHMDQISSAVETEACRGAGVLTGQAEPQIPSLSTPK
PAIPVHQEHVPEECTPAPPFSELLKVSLTDSSMQSQSHLENLPLPLGLHQYNTEITILED
TAGCKHHSSTDKNTHGGYIDTLSRTLGSESQDCSIEELSGAYSTKQTFTHSNDSKQEEVK
ADGDTISLWNQISESTSDTERKEETDDLADQTASDCLTPGERIVHATVPSTVIEHNQVLN
TVMNSGVSVLNTKLNPPSSPRDGRDDGVVFRKVSLVKNELPEPSRASPELQRRFQALQDK
TERSDYTHSYEKAVYTSHFHSPETEVTHYSGGRGREELSLPGERLQIIPTHSQLDPEPAL
FIVEADDSEVFQAMRVELHHSPTSTEPPLLNSEMDNLVDTLKSMDRPLRQRVQRAPSNAP
FSSLPPIEEDAPVSPSITPLSPPFSPVHEPKSMLNGSSGLDFGFNWSSTKDMRSPLTMMK
EQQFGDAQNRGLSLPLRASALSSIVMRRSSLNDLSPEDGSAKPLINGASSSSRLENSFFF
QPSENGASSRSIFRAASLPDIGSGADRISSAAKSTDSLVGSRFERFSYLTSPSNSLSGIA
EASRISVAPFAQSQSAESQSFSHKSTSELYRSLPSETLLKSPPSLSIQRSSSLDGGFLIN
DNLQVNQKPEPEPERNLLLKYRAFPDAYLTKEKEHGKLNPRPGKMIIYDKPGFTGERIEV
RGDVVDATPWEFTDTISVRVIRGGWVFYEKPDFKGEKIALDEGEMELTDPFRPAEEEEEA
DLQNGGESHGEIVNDGEEQQENKPHRTRKFSIGSIRRAVRDYSVPEISLFPEENAEGKKV
TFRDTSEDARIFGFPIKANSIIINAGLWLVFAEPFFQGVPRVLEVGGFPSPSAWGVTHPY
VGSLHPLKIGEPRVENLYEPRLVLYEKPYFTGKSREIYSSMRDFLSRADKQQTLFMFSAG
SLKVTGGCWVGYEKEGFRGNQYLLEEGEYHDWRVWGGVNSELRSVRVIQSDLSEPQLVLF
AMPEQESEQDEERTFDVTEAVADVELFGFGINTRSIQVLSGAWVAYSHVDFSGNQYVLEK
GFYNNCGDWGSGDNRICSLQPILTAPSDGPILRNEVLLYSEPDFLGSCRVCHHNQDALPE
SLMVRSCRVVGGSWVLYGEEKFSGSMYVLSEGDYPNLSSMGLPADSRVRSVRAVPVSFCV
PSVSLFGLECFEGREVTIDTQISSMQEEGFNTQFLSVRVNTGCWVLCEHSNYRGRQFLLE
PIEITNWLKFSSMSCIGSLYPVRQKQRPFRIRNKQTGHCVSVQGGVEDMKTGRVLVSEQV
EGMSDIWLYQDGLIKNKLARSMSLQVMGNVESGAKVVLWTETRVPVQTWSAQMSGAIASL
TFPGMVLDIKGGKTYDKEHLVIREENEEQPSQQWELEFV
NT seq
8040 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaagcagctccagcaggaggactctgaagagcttgttttctcggagtgaa
gtgaatctgtcggagcacgagcccaagactgacagcaatggaggatcttttagactcttc
aagtggaagaagaagaagaaaagcgagagctcagaggacaatccaaacactgacagagct
gaatctgctgacggagacattcaggatggagaagagcagaataaacacaagacggctctg
ttcggcaggtcaaagaaggggaagcggagctactctgagacagaccttcataaacccaag
ggctttattggatccctgacctgggggaggaagaagaagcaaaacagagatcgggttcag
gatcttaccagcaatagtgacatttcaggagtgaaagatcacatcagtgaacaggaagaa
tttgacaaccataaagaaacagaacaaatccaggcttgtgttgaggcagtgaggtctgca
ccagaacctccctgtgcttctgaccaatcccagtcccagcatgtgctgagcgaccagtct
acactcagtgaagaagatgcagggttcatgcctacagctcaggagagtaaagcaatacca
tacatcgactcttctgatagtgatgcttaccaaaccccccctgatagcccaaacatctca
tctgatgcccaagctcaacccgatacccaatatggaaaactatctgctcagaattccatc
acttctgagacttcagagtattacatctgtcctggtactgatatgaaaactgcagcatgt
actgatacatctacagcccgtatttcacatgacaatgttgtttctcagaaaaggtcacac
ctggaacacggagaatacagtaatgcagcatctcttacacaggagagttacatctccaga
cctgagagcacagactcttccattcatgagagttcctctttgttcatacccaaaagtcct
gtcttttccatccctgagagttcattctcttctgatccccaaaatcccactgcttccatc
cctcaggtttcctcctcttctgatccacaattgtccacctcttcaattcctgagagttcc
ttctcttctggtccccaaatatccacctcatccatcccacagagtacctccacttctgtt
ccccaaatttccacctcttctatcccccaaagtgcctctacttctgtttctcaaatttct
acatcttcagtccctgacagttcttcagtgtctgttccccaaattttcatatcttcagtc
cctcagagttcctcctcttctgatccccaaatttccacctctttaatccccgagttttcc
tcctcttctgatccccaaatattcacctcatctatcctacagagtacctccacttctgtg
ccccaaatttccacctcttccatccctcagagttcctcctcttctgttccccaaatttcc
acctcttccattcatcagagttcccccacttctgttcctcaaatgtccacctcttccatc
cctcagggttcctcctcttctgttccccaaatttccacctcttccatccctcagagttcc
tcctcttctgttccccaaatttccacctcttccatccctcagagttcccccacttctgtt
cctcaaatatccacctcttccatccctcagggttcctcctcttctgttccccaaatatcc
atctcttccatccctcagagttccaccaattctgttccccatagttccactccattagtc
catgaaagttcctcttcttacatccctcaaagttccacctctaccatgcatgatagtttc
aactcagacagtaccatgacccagagtttcagcacaaacacaaattctgcttttaacctt
cctgaagactccttcagtcatccagctgacaccatatcatatgaagattctcataccacc
tctgcaaatgtcagaaacaagtctttcattgacagtaatgtaatcaactctgacccatcc
agtcccactacagacatctgtgaatcagaccatgtgtcctcaaagccatatgtgattgtg
tccagcactctgtgctcctccagaataaaaggaaaccgaataaaaactgatagaaaacca
tcttcctccaataccaatgtttctgaaagtgatgttactgtacattccacagctgattca
ggttcacgagaagaaactccccctgagagtagttgtgtgaccatttcaaaggaatctcat
gcaacagataattattcttctttagcatatgccactgactcagagaaacacaaccctgct
caacctgtccttcctgagaatgagtcgaatatacctttatctccatcagctcgagcatac
actatcattaagtcaaccaaagtagtcacctttgacctttcaggtccctcagaccacatc
agctttgaccattcccacagatctctctctaacaatgagcctgattcagatgtggaaacc
ctgaccgaaatattagaccatgagggtcaggacaataaccaaactgatactgacagctct
gcaaaagcatcctcaggttttccaaaccataccatccctagcatgtctttgacatcttat
cctccccttcatttagatgtttcagaccagatgttcagctctcagtccttaaaggcaaag
actgagaaacaacagaaaacatccagagcatgtgaagatcaagagaaatgtcttcaagat
gcatccatcactgaagacacaaaacttcagaaggtttcggaagaatgtggaatgcttaaa
aagaaggaagatgacgtgctcatagaaactgagaaacaacagaaaacattcagagcatgt
gaagatcaagaggaatatcctcaacatgcatcaactcaaagtttggatcctgttgatcga
ataaatcagaataaatccaatgcagaaataacggaagccacaacacttcataaggctttg
gaaaaggttgcaatggtcgaagagaagagagatgaattatacactaagatggagaaacaa
cagaaaacattcagagcatatgaagatcaagagggatatctccaagatgcatcaactcaa
agatttactgagaagtctattggtgagagtgaaaccaatgcggaaaggatgaccactaca
gatgatgcaacatccgtcactgaagacacaaaacttcagaaggtttcggaagaatttgca
atggttaaaaagaaggaagatgacgtgctcatggaaactgagaaacaacagaaaacattc
agagcatataaagaccatgaggagcatcttaaagatatatcagctcatagatttattgag
aagtctgttgatcaagataaatccaacgcagaaatcaaagtatccacaaaacttcacaag
gctttggaaaagtttgcaatggtcgaaaagcagagggatgatttgcatgaagagactgag
aaacaacagaaaacatccagaacatatgaagaccgagaagcatgtcttcaagatgcatca
actcaaagatttattgagaagtctgttgatcagaatgaatccaatgcagaaatcacggaa
gccacgaaacctcacaaggctttggaaaaggttgcaatggtcgaaaagaagactgatgaa
ttgcacatggggaccgagcaactgaaaacatccagagcatatgaagaccgagaggaatat
gctcaagatgcatcaactcaaagattggaatctattgatcaaataaatcaaaataaatcc
aatgcagagaggacgacaactagaaatgatgcaatatccattctagacaacgaattaaac
caaatcatcgaagccacaaaacttcacaaggcttcagaagattctccaatgctcaaaaag
atgagcaatgaatcgcacatggaccaaatctcatccgcagtggaaacagaggcatgcaga
ggagctggagtgttgacaggtcaagcagagcctcagattcccagtctttccacaccgaaa
ccagcaataccagtccatcaagaacatgtgcctgaagaatgcactccagcccctcccttc
tcagagctgctcaaggtgtcacttacagattcaagcatgcaatcacaaagtcacctggag
aatctgccactcccattgggtttgcaccagtataacacagagataacaatcctggaggac
acggcagggtgcaaacaccactcgagcactgataagaacacacatggtggctatatagac
acactatcaagaacactaggtagtgaaagtcaagattgcagcattgaggagctctccggt
gcttatagtacaaagcagaccttcacacactccaatgacagtaaacaggaggaggtaaag
gcggacggagatacaatctctctttggaatcagatcagtgaaagcacatcagatacagag
agaaaggaagagactgatgatttggctgatcaaacagcttctgactgtttaacaccaggt
gaaaggatcgttcatgcaactgttcccagtacagtgattgagcataatcaagtattgaat
acagtcatgaactctggagtctcggtgttaaacacgaaacttaatccaccgtcgtcacct
cgagacggcagagacgatggtgtggttttccggaaagtttctctggttaaaaatgagctt
ccagagcccagcagagccagtcctgagctgcagagacgcttccaagccctccaggacaaa
accgagcgttcagattacacccacagctatgaaaaagcagtctacacctctcatttccac
tctccggagactgaagttacacattacagtggcgggaggggccgggaggagcttagttta
cctggagaacgactgcagatcataccaacacactctcagttagatccagagcctgctctg
ttcatcgtggaggctgatgattctgaagttttccaggcgatgagggtagagctgcatcat
tcaccaacctctactgaacctccattgctcaactcagaaatggataatctagtggatact
ctgaagagtatggatcgaccgctacgccagagagttcagcgcgcgccatctaacgctcca
ttctcttccctgccgcctatagaagaagatgctcctgtttccccctctatcactccttta
tctcctccattctcacctgttcatgagcccaaatccatgctaaacggaagctctgggctt
gattttggctttaattggagctctactaaggatatgcgctctccattgactatgatgaag
gagcaacagttcggagatgcacagaatcgtgggctttctcttccccttcgtgcttcggct
ctgagtagtattgtaatgcgcaggagttcactgaatgatctcagtcctgaagacggctct
gctaaaccgctaataaacggcgctagctcctcctcacggctagaaaacagcttctttttt
cagccatcagagaacggtgcttcgagtcgctccattttccgtgcagcatctctccctgac
atcggttctggtgcagatcggatcagctccgctgctaagagcaccgattctctggttgga
tctcgatttgaacgcttctcgtatctcacgtctccatcgaactctctgagcgggattgct
gaagcttctagaatcagtgttgctccgtttgcacagagccagtcggcggagagccaaagc
ttcagtcataagtccacatctgagctgtatcgctctctgccgtctgaaacgctcctcaag
agtcctccgtctctgagtatccagcgcagcagcagtctcgacggagggtttttaattaac
gacaacttacaagtcaaccagaagccggagccggagccagagaggaacttactgctcaaa
tacagagccttccctgatgcctatctgacgaaagagaaggagcacggcaagctgaatccc
cgacccggaaagatgatcatctacgataagcctggattcacgggtgagcgcatcgaggtg
cgtggagatgttgtggacgccacgccatgggagtttactgacactatatcagtacgagtt
attagaggaggttgggtgttttatgagaagcctgattttaaaggggagaagatcgctctg
gatgagggcgagatggagctgacggaccctttcagaccagcagaagaagaagaagaggct
gacctgcagaatggaggagagagccatggggagatagtgaatgatggagaagagcagcag
gaaaacaaaccgcacaggacgaggaagttcagcatcgggtccatccggcgagcagtgcgg
gattacagcgtccctgaaatcagcctcttccctgaggagaatgcagagggcaagaaagtg
acgttcagagacacatcagaggatgccagaatattcggcttccccatcaaagcaaactcc
atcatcatcaatgctggattgtggctagtgtttgccgaaccctttttccagggtgtcccg
agggtcctggaagtaggtggattccccagcccgtccgcctggggcgtcacacacccatat
gtgggctcgctgcacccgctgaaaataggggagcccagagtagaaaacctgtatgagccc
agactggtgctgtacgagaagccgtatttcacaggtaaaagccgagagatttacagcagc
atgagggactttctgtcacgagcggacaaacagcagacgctcttcatgttcagcgcagga
tccctcaaagtcactggaggatgttgggtgggttatgagaaggagggtttccgtggtaac
cagtatctgctagaggagggcgagtatcatgattggcgggtgtggggcggagtcaactct
gagctgcgctccgtcagagtcattcagtcggatctctcagagccgcagctggtgctgttt
gcgatgccggagcaggagtctgagcaggacgaggagcgcacgtttgatgtgacggaggcg
gtagccgatgtggagctgttcggttttggcatcaacactcgctctatccaagtgctgagc
ggagcgtgggtggcgtactctcatgtagacttctcagggaaccagtatgtgctggagaaa
ggcttctataataactgtggagactggggctctggagacaaccgcatctgctccctacag
cccatcctcacggcccccagtgatggacccattctcagaaatgaggtgctgctgtactca
gagccggatttcctcggctcgtgtcgggtttgccatcataaccaggacgctttgccggag
agtctgatggtgaggtcctgcagggtggtcggaggaagctgggtgctgtacggagaagag
aagttcagcggcagcatgtatgttttatcagaaggagattatcctaacctgagcagcatg
ggtttaccagcagacagcagagtccgctccgttagagctgttcctgtgtcgttctgtgtg
ccatcggtttcccttttcggtctggagtgtttcgagggccgtgaagtcaccatcgacaca
cagatctccagcatgcaggaggagggcttcaacactcagttcctctccgtcagggtcaac
accggatgctgggtgttgtgtgagcacagtaactacagggggcgccagttcctcctggag
cccatcgagatcacaaactggctcaaattcagctccatgtcctgcatcggctctctgtat
cctgtcagacagaagcagaggccgttccgtatcaggaataagcagacggggcattgtgtc
tccgtgcagggcggtgtggaggacatgaagacgggtcgagttctggtgtcagagcaggtg
gagggcatgagtgatatctggctctatcaggacggactcatcaagaacaagctggcgagg
agcatgagtctgcaggttatgggtaatgtggagtctggagcgaaggttgtgttgtggacg
gagacgcgtgtgccggtgcagacgtggagcgctcagatgagcggagccatcgccagcctc
accttccctgggatggtgctcgacatcaaaggtggcaaaacatacgacaaggagcattta
gtgatccgcgaggagaacgaggagcagcccagccaacagtgggagctggaatttgtttag
DBGET
integrated database retrieval system