Danio rerio (zebrafish): 570215
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Entry
570215 CDS
T01004
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
570215 (aff3)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
570215 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
570215
NCBI-ProteinID:
XP_009302946
ZFIN:
ZDB-GENE-030219-193
Ensembl:
ENSDARG00000079575
UniProt:
A0A8M3AW05
LinkDB
All DBs
Position
9:complement(23106546..23142346)
Genome browser
AA seq
1242 aa
AA seq
DB search
MPTFHGSKGKLASVCFMLQHASQDMTQSWPYQPPPGEGGTQHFLYSHSKEGKQPSGRQRH
ARDGVSMRMPSRPLVAPHKSMLADDLKLSSDEDDKDEGSEQTTSWADNDRLSTQHQQQQQ
QHHTHTHAGRVRHSSSGSSGTDRSSDWESSSQRSRSPSPGAHTRCGTPTQQRTLNCSTET
ESPPSTHWQLDRWLEKVPKKHQSTDYNPGGGHRQSAKSDCDRGPSPGRYWSRESESRRDY
SPCGSQVPSPKFDYSPRNSPHPSPGYSPCPSPGNSLVQSPVPSVCPSPGDSLQGSRSPSP
LPTHPPRSPSPSLLSKAVPSQGIYSQVQTSQQESPRHISRPTVASNSGHHPKVRPWVPPD
HNANQRKELRAKDSRSKDSQSKDSRPGPQHQPFNSKHGSTERSHKDFTHKPEAKNSESTR
KQRFNSPSKTVSKHPLQQRPSISPKPQARTLSTVDHSSEFNHKSNEPTAVPVHNSTSKSG
HSSHFSILKSSECGPLSKFKDSLQREANSRSSHSSKNKSFPDTNRSSSKQTSQSSSSPKP
RPKLEDSSVPRTGHSQKEPKPRERDREVDSRGRAQGVNLVPTGKEQRHRRLAEEQVIRRR
WVRSSEEEEGEEDKRTEEGERERKRRRRREPEAEWRAVQPKQRPHTSQHHTQRECNGPNL
EEQRRKKRRWSNGDVSSRPYVTDSSPSPPLSPPTPTPVVKPTHPLSSSSSSSFSSSSSSS
ESDSESSPPRNIAKVPADSTSNKKTVSKSRHEKQNSGSSSHPERSCLSTPETEKHSRGRH
KLYTLVPFGRTEKSPTIPHRGLKKLVVRIDLCLLGRVPSADELTERQSSSSSVSSGKAKE
KSSMKHLNHSDQPPGDGRSKRKAENGDLQRENKRNHSCTDKQPSSVHHETEETCVDNQQN
GCQDDYFYSKRPVSPLSPPSNILELSKHSVKAQHAEKYYTPPEKDNDSTAQKTQIQKTQP
KVEVECIGVSGHLQPLSGSRVPPPNLPLHYRGTVPISDVSHHAEYYMHEAKRLKHRADAM
VDKLGKAVNYVDAALSFMECGKAMEEGPLESKSPYTMYAETVELIRYAMRLKSHAGPGAS
QEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKSSPKGPHNPPTRNDSGKGT
IPPASICSVSIMGSHTGKSPSTVISIPHRIHQMAANHLNITNSVLYSYEYWEVADTLAKE
NKEFFNYLNTLTGPLTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcctacctttcatggaagtaagggaaaacttgcaagtgtttgtttcatgcttcagcac
gcatcccaggacatgacccagtcctggccttaccagccgcccccaggcgaagggggaact
cagcatttcctgtactcccactcaaaggagggaaaacaacccagtggacgacaaagacat
gcgagggacggtgtgtctatgaggatgccctcacgtccactcgtggcccctcataaatcc
atgctggctgatgacctaaagctcagcagtgacgaagatgacaaggacgagggaagcgag
caaacaacttcctgggctgataatgaccgcttgtcaacccagcaccagcagcagcagcag
caacaccacacacacacacatgccggaagggtgagacattctagctcggggtcttcagga
acagaccgctccagcgattgggaaagcagcagtcaacgttcccgcagcccaagtccaggg
gcgcacacccggtgtgggaccccgacccaacagcgaaccttgaactgcagcactgagacg
gaaagtcctccatccacccattggcagttggacagatggcttgagaaagtacctaaaaag
catcagtccactgactacaatccaggaggaggacacagacagagtgcaaaatctgactgt
gatcgtggaccatctcctggaagatactggagcagagaatctgaatcaagacgggattat
agtccatgtggaagtcaagtcccaagtccaaaatttgactatagccccagaaacagtcct
catcccagcccaggatacagtccatgccccagtccaggaaatagccttgtgcaaagccca
gtgccaagtgtgtgcccaagtccaggagacagcctccaggggagtcgaagtcccagccct
ttaccaacacaccctcccagaagccccagtccaagtctcttatccaaagcagtacccagc
caaggtatatattctcaggtgcagacatctcaacaagaaagtcccaggcatatttcacgg
ccaacagttgcctccaattcaggacatcatcccaaagtcaggccatgggtgcctccggac
cataacgctaaccagagaaaagagttaagagccaaagattctcgatccaaagactctcag
tctaaagactccagacctggtcctcaacatcaaccatttaattccaaacacggctcaaca
gaaaggtcacacaaagatttcacacacaagcctgaagccaaaaactctgaatccacaaga
aagcaaaggtttaactcaccttcaaaaactgtttcaaagcatccgctgcagcaaagaccc
agcattagcccaaaacctcaagccagaaccttatctacagttgatcatagtagtgaattt
aatcacaaaagcaatgagcccacagcagtgccagtccacaattcaacctccaaatcaggg
cattcatctcattttagtattttaaaaagttctgaatgtggtcccttgtcaaagttcaag
gactcattgcaacgtgaagcgaacagtcgatcaagtcacagctcaaaaaataaatctttc
cccgataccaaccgatccagctcaaagcagacttcccaatcaagctccagcccaaaaccc
aggcccaaactagaggacagctcagttcccagaactgggcactcccaaaaagagccaaaa
cccagagagagagatcgggaggtggacagccgaggtagagcccagggagtgaacctggtg
ccaaccggcaaggagcagagacatagaagactggcggaggagcaggtaataaggcgccgc
tgggttcggagttctgaggaagaggaaggtgaggaagataagagaactgaggaaggggaa
agagagaggaaacggagaaggaggagggaaccggaagctgaatggagggcagttcagccc
aaacaaagacctcacacaagccagcatcacacacaaagggaatgcaatggacccaacctt
gaggagcagaggaggaagaagagacggtggagtaacggagacgtttcctcacgtccttat
gtgacagactctagcccttctcctccactctctccacctacccctactcctgtcgtcaag
cccacccatccattatcttcttcatcctcatcttccttttcatcctcatcatcttcctct
gaatcagactctgagtctagtccacccaggaacattgcgaaagtccctgcagattcaaca
tcaaacaaaaaaactgtatcaaagagcaggcatgagaaacaaaattcaggctcaagtagt
caccccgagaggtcctgcttaagtacccctgaaacagaaaaacacagtcgggggagacac
aaactctatacactcgttccttttggccggactgaaaagtcccccaccatccctcatcga
ggcctgaaaaaactagttgtgaggatagacctctgtcttctgggtagggtcccgagtgca
gatgagcttacagagagacagtcttcgtcttcatctgtgtcatcgggaaaggcaaaagaa
aagtcatcaatgaagcatctgaaccactctgaccaaccacctggagatggcagaagtaaa
agaaaggctgagaatggagaccttcaaagagagaataagagaaatcactcgtgtacagat
aaacaaccatcatcagtccatcatgagacagaggaaacctgtgtggacaatcaacaaaac
ggatgtcaggatgattacttttactccaagaggccagtgtccccattatctcctccgtct
aacatactggagctctcaaagcactctgtgaaagctcagcatgcagagaagtactacaca
cctccagaaaaagacaatgattcaacagcacagaaaacccagatccaaaagacgcagccc
aaggtagaggtggaatgtattggggtgtcaggacatctacaacctctctctggatcgagg
gttcctcccccaaaccttcctcttcactacagaggaacagtacctattagtgatgtctct
catcatgctgagtattatatgcatgaagccaagagattgaagcatcgagcagacgctatg
gtggataagttaggaaaagctgtgaattatgtggatgctgcattgtctttcatggaatgt
ggtaaagccatggaagagggaccactggaatccaagtctccatacaccatgtatgctgaa
acggttgagctcataagatacgctatgagactaaagagccacgcagggcctggagccagt
caggaagacaaacagctagctgtactatgtttccgctgtcttgctcttctttattggcaa
atgttcagacttaaaaaagaccatgccctgaaatactctaaagtcctgctagactacttc
aagagttctccaaaaggacctcacaacccccctacaaggaacgattctggaaaaggaact
attcctccagcctctatttgctctgtcagtataatgggatctcacacaggcaaatcacca
agcacagtcataagcattccacatcgcatccaccagatggcagcaaatcacctcaacatc
accaacagtgtcctgtacagttacgagtactgggaggtggctgatacgctggccaaggag
aacaaagaatttttcaactatctgaacacgctgactggaccgttgactctgcacagcagc
atggctcacatcgttcagtacaccaggcaagggctccaatggattcggatcagtgctaat
ctgtcataa
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integrated database retrieval system
