Danio rerio (zebrafish): 570582
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Entry
570582 CDS
T01004
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
570582 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
570582 (vcpip1)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
570582 (vcpip1)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C64
570582 (vcpip1)
Ubiquitin system [BR:
dre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
570582 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Motif
Other DBs
NCBI-GeneID:
570582
NCBI-ProteinID:
XP_073785000
ZFIN:
ZDB-GENE-070912-613
Ensembl:
ENSDARG00000060177
LinkDB
All DBs
Position
2:45059228..45072305
Genome browser
AA seq
1108 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLIFPAHTSMSIECTECGQRHEQKNLANVEEVTN
PDVVLHNLLRNALLGVPGPPKKGSELVKVMGLSNYHCKLLSPILTRYGMDKQTGTAKLLK
EMNQGDIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLHFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPVILLDSLSGMRSSGDYSATFLPGLIPEE
QCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLALPRLPAALLPKAWGVPQELIRKYVS
LDPSGSCVIGGDRSLQDKYLLRLVSAMEDVFMDKHSIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSIQEGRLHRCLVCNALSELHVPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLSSLTTCTWCHGTSVRRVRGDGSVVYLDGDRTNTPSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWAGRVVRETVYWFQYEIDPTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKKSQDEYNPVAIEGAHVQNKVDGGESSAHPPTKI
ILTGQKGKTLHKEELVMSKTERVLQHSISEQAALSQRRSTDRVRHQDPRPSSPSSSSSSA
PPTPTKVPPTSGEKKIRVTTSDGRQAMLTLQPHTTYSDLQNSIIQVFNLSPGQLCIRHGF
PPRELPPPPPEDQNRPVALQHGDRISVEVLKESSADPQVTQTHTHSPQTHAHSDPRLSHS
SSRELQDNIDLEMSSLCLLAALMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHC
TLPHLSGKTFVFNATEERLELCVDTAGHFPVGPDVEELVQEALSQLRSDAASRSREGSPA
HSLRLGSGGAVRKKEQNITAFQGKGHSLGSAPPEHPPIRRQHSSGVDLSGSARGEGLTLS
GEDLVRVAPGMLTLREGRGMGLEPAVIEAQRQRLQEMVSNIQASMDKHLRQHTAARNDGK
EEETPDKPEEMESHGPEPPNTFEPMDQS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcaaaacagaaggataggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcatcttccccgcacacacctccatgagcatcgagtgc
accgagtgcggacagagacacgagcagaagaatctcgccaatgtggaggaagtgactaac
cctgatgtagtgcttcataatttgctgagaaatgctttgctgggtgtgccaggccctccc
aagaagggctcagagctggtgaaagtgatgggactgtccaactaccactgcaagctactg
tcacccatcctcacccgctatggcatggacaaacagacaggcactgccaaactcttgaag
gaaatgaaccagggagacatctttgactgctcgctgcttggggaccgtgcatttctcatc
gagcaagagcatgtgtccactgttgggtatggacgggaccggtcagggagcttgatctac
ttgcatgacaccttggaggagatcaagaaagcgaacggtaatagagagtgtcttattcct
gtgcatgtggacggagatggacactgcctggtccacgccgtgtccagggcgttagttgga
cgcgagcttttctggcacgctcttcgggaaaaccttaaactccatttcaagcagaacctc
gaccgctacaaagctcttttccaggacttcatagatgctgcagaatgggaagacatcatc
aatgagtgtgacccgttgtttgtccctccagaaggcgttccactgggcctgcgtaacatt
cacatatttggcctggccaatgtacttcacagacctgtaatccttttggactcgctgagc
ggtatgcgaagctccggggattactccgccactttcctaccgggccttattccagaggag
caatgccgagggaaagacggcactctgaacaagcccatctgcatcgcctggagcagctct
ggcagaaatcactatctgcctcttgtgggcatcaagggcttggctttgccccgtttgcct
gctgcactgcttcccaaagcgtggggtgttcctcaggagctcatccgcaagtatgtgagt
ttggatcccagcgggagctgtgtgattgggggcgaccggagcctccaggataagtacctc
ctgcgcctcgtaagcgccatggaggatgtcttcatggacaagcacagcatccatcccgct
ctagtagccgacgtccaccagtacatataccgacgcactggagtgatcggcgtacagccg
gaggaggtgacagaagcggccaagaaatccatccaggaaggccgcctccaccgctgcctg
gtctgcaacgctctttcagagctccacgtaccagccgaatggctcatacctggagggaaa
ctctacaacttggccaaatcaactcacgggacgctccgtgcagacaagaactacagtttc
ccattaaatagtttagtttgttcctacaacccagaaaaagatgtgctcgtgcctgattat
aaactcagctcactcacaacctgcacctggtgtcatgggacctcagtacgcagagttcgg
ggtgacggctctgtggtgtatttggacggggaccgcactaacactccctctcaaggtggc
aagtgcggatgtgggttcaaacacttctgggaaggaaaggagtacgacaatcttcccgaa
gccttcccgatcactctggagtgggctggccgtgtagtccgagaaactgtttattggttc
cagtacgaaattgatccgactctcaatagtaatgtatacgatgtgaccatgcgtctcgtc
acaaagcacttccctggtgaatttggcagcgaaatcctagtccagaaggtagtaaacacc
atcttgcatcacaccgcaaagaagagccaagatgaatacaacccagttgccatcgaaggt
gctcacgtgcaaaataaagtagacggaggtgaatcttctgctcaccctccgactaaaatc
atcctgacgggacagaagggaaaaactctgcataaggaggagctggtcatgagcaaaacc
gagagggtgttgcagcacagcatcagcgagcaggctgccctctcccagcgccgcagcaca
gatcgcgtgcgccatcaggaccctcgcccatcatctccttcctcttcatcatcctccgct
cctcccactcccaccaaagtacccccaaccagcggagagaagaagatccgtgtaaccacc
agcgacgggaggcaggccatgcttactctgcagccgcacactacctacagtgatctccag
aactcaatcatccaggtcttcaacttgtcgcccggacagctgtgcattcgtcatgggttc
ccgcccagagagctgcctccaccacctcccgaagaccagaaccggcccgtggcgcttcag
catggagatcggatttctgtggaggtgctgaaggagagctcggctgatcctcaagtaacc
caaacacacactcacagccctcaaacacacgctcactctgacccacgcctcagccacagc
agtagcagggaacttcaggacaacattgaccttgagatgtcatcactgtgtctcctggca
gcactcatgggtgaagatgtctggtcatatgccaagaaactgcctcacctgttccagcaa
ggaggagtcttctacaatattgtgaagaaagacatgggtctcctggacgggaagcactgc
acactgccccacttgtcgggtaagacgtttgtgttcaatgcaaccgaggagcgtttggag
ctgtgtgtggacacagccgggcattttccagtgggcccggatgtggaggagctcgtccag
gaggccctttcacagctccgctcagacgcagcgtctcgtagccgcgagggaagtcccgca
cacagtttgcgtctgggctccggtggtgccgtacgcaagaaggagcagaacatcactgcc
ttccaaggtaaagggcactcattaggttcggcccctcctgaacatccaccaatcaggcgg
cagcacagcagcggcgttgacctcagcggcagtgcccgcggagaagggttaacgttgtca
ggggaagatttagtgcgtgtagctccaggcatgcttactttacgtgagggccgcgggatg
gggctggagcccgctgtgattgaggcccagcgtcagcgcttgcaggagatggtatctaac
atacaggcgtcaatggacaaacatttgcgccagcacactgcagcaaggaatgatgggaag
gaagaagagactcctgacaaaccggaggagatggagagtcacgggccggagcctcccaac
accttcgaaccgatggaccaatcctga
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integrated database retrieval system
