Danio rerio (zebrafish): 570753
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Entry
570753 CDS
T01004
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X2
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
570753 (chd6)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
570753 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
CHDCT2
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
570753
NCBI-ProteinID:
XP_009300975
ZFIN:
ZDB-GENE-130530-559
Ensembl:
ENSDARG00000017244
UniProt:
A0A8M3BAM2
LinkDB
All DBs
Position
6:complement(54225040..54315352)
Genome browser
AA seq
2952 aa
AA seq
DB search
MNPARALGHRRRHKEQEKMKIQKKDKQMSASYVLKHTPSAAASNASDQNAQTTFPIGHLG
KEQLRIIGGPPNHCMAHPKHSGPAVSSHSLRPSMINNEEDDGGGGTKVKKKRRKKDKKES
EWHEDGQSNAKPKRREQKEGKEILPRKTKTAKEQKDHKKRDAKAQKEVKKVKKGQDVKVK
TLAKNQCATHTPSKRGRKPKEQGAMPPEKKKKGKRKSDAVLEMVESDDTASLSTLATGGE
ESTDPMDNTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGSGRIAAMSSSTLAWQAEE
PPEDEANIIEKILSVRTVNKEMAPDEPPEEMEEFYVKYRNFSYLHCKWATLEELEKDPRI
HQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCS
LSYEESTWELQEDVDPVKIKEFEELKKVPEMKHVERPLPEQWQKLEKSRDYRNGNQLREY
QLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIFLMGLRGPFLIIAPLSTITNW
EREFRTWTEMNVIVYHGSQISRQMILQYEMYHRDEQGNIMSGEFKFQGVITTFEMIMADC
PELKKINWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFL
EPSQFPSETTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELT
NIQKKYYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRK
TYSSDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRY
TYERIDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ
NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGV
QQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKA
SFVSSGNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDE
LMEFSELDSDSEERPCRTRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWH
LAERDMEVLCRALLVYCVRHYKGDDKIKSFIWDLITPTEDGHNQALQNHSGLSAPVPRGR
KGKKLKNQLSPPELKNADWLAHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVEVL
GDAATQALEGIPSSKLEVTLPDIDYIEIPTIWWDAEADKSLLIGVHKHGYERYNAMRADP
ALCFLERVGMPDVTALTVEQSGAETPSDAPDGISKSDEIKEENHVKSEELEEKVEIKEEP
MSDETAKNDNMVTGCFVASLAGDLTAELMEQGRIQWPAGSALTARLRRLITAYQRYTRRE
PLRHDFLLHEGIAPVAWQIGEFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSSFGVVYD
PEKKNFDWSQFRALARLERKTDESLERYFHSFVSMCRTACRLPPRKDEGNVDPSLFVDPI
TEERAARTLYRIELLRKVREQVLRHPLLGARLQLCRPSLYLPVWWECGKHDRDLLIGVAK
HGLSRTDFYILNDPQLSFLEAHRNYVHKENHRYPVPGLPHHHCCLYDANIGHCQSPQPPE
YHPTPAHHTPTQLVHTHGHHQSSEASEPGSSLGIGSGNREGFLDCPPLDDSLELGSLQHE
GLTSDTLHGKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGTQGDMADSIAGKLRSDVL
VGEQGSSEETGLMAPSVELDELQTPWESSDHAETSDMFNEADPILGAQALEPSFLDAPQP
DDGQEGDETLTDCLSMPSSDSQSNPVEPLAPSFMLFKDLNVGETSVDQTDLSASLPEYVP
PPPLGLPDVSLDQADPLNEEQEDKLSDSNITPCVPSPEEEAESMGFNFEKEDLSPDSQKT
KDTQDDMPSIESPSENCLDESQKEDCKVPFDDSIERDLKDPCEMALEEPYEKPLREPEKV
PLEESYDLTCDETLQEPCDGFQQDAVEQQLMEKPSGETCKEPSDSIENCNLTNTTLSADY
PLPPSLPSSPTTLPDTSVSPVLDVVPKQEFLMDPMVSEVKPEPDSTTQTPHLEQTEALEI
KDKIKDESAKTPVLLGDVDSPRFALPICEMADSVHEIREPTIAQLLQEKALFSFSEWPKD
RVIINRIDSICHTILKGKWPSSSQQFESPTSLANTCVPSSAHQRAGFLPNRMPISQSLNF
NLSHTVPHIQKERLVTPTFIPELKRPRRGFEFEAEVLAKPSHLGDKIQVGVSHRANALLI
NGWQDAAIDLSKPAELTVGGDSGPIGHMSHTVQSAAHKITGIGSIQGSLGLDMAGILQAG
LIHPVTGQIVNGSLRRDDSMLRRRRGRRRNVETADLSFIKGRSINLPEQQSGAESISHPV
VSSTSSQSECPPATPTTLSSHSATPSPAAAAATETLSASVDRETANKGLMEWLRQNPNYN
MELSAFPASQNAGMLHSFLDRPKQRRHRCKDPSKLDVNSLTGEERVPVVHRNTGRRLGGA
MAPAIKELSRWLDANSEYSVAPDWADVVKHSGFLPEGKFTRILSGPVSRDPGPRRRGRRP
RTEMPKAPELPAGMGSLFMNGGLIGSMDLVSLPNLRNVPGIPLTGIMGFPHGFATAVSSD
DAKNGLSMLPMMLHGMATVQPPMYSAHMSGMISQPMSTATSTMSTVTASSTTASVTLTNS
ATVTSTSVDSSDTAPPQDNASSPVSSEKGNKEDAKQGGEDKKTSASVSTAAATSSSNSSS
ITSTGSHLTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMPAADSTGSPKRKRKKVREEG
LVEGSGILGTQIDGEESKGVKDEQTPELKSQEARVEENGPDVDLAPTNLIKAPSEDKRTE
ENEKTEQDAQGD
NT seq
8859 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagcgcgtgctctcggtcaccgacgcagacacaaagaacaagaaaagatgaaa
atacaaaagaaggacaagcagatgtctgcatcctatgtactaaagcacactccatccgct
gctgcctcgaatgcctctgaccaaaacgcacaaactacatttcccatcggccacttgggc
aaggaacaactacgaatcatcggcgggccgcccaatcactgcatggctcacccaaagcac
tctgggcctgcagtcagcagccacagtctccggccttcaatgataaacaacgaggaggat
gatggagggggcgggaccaaggtgaagaagaaacggaggaaaaaagacaagaaagagtcg
gagtggcacgaagatggacagagcaacgctaaaccaaagagaagggagcaaaaggaaggg
aaagagattcttcccagaaagacgaagacagcaaaggaacaaaaggatcataagaagagg
gacgcaaaagcccaaaaagaggtcaaaaaggtcaaaaaaggtcaagatgtgaaggtgaaa
acgctggctaaaaaccagtgtgcgacacatacgccctccaagagagggaggaagccaaaa
gagcagggtgccatgcctccggagaagaagaagaaggggaagaggaaaagtgatgcagtg
ctggagatggtggagagtgatgacacagcctctctcagcacgctcgccaccggcggggag
gaaagcaccgaccctatggataacactaagaggcgatcagggcgtcaagtgaagcggcgg
aagtataacgaagatcttgatttcaaggttgtggatgatgacggggagaccatcgctgtg
ttgggctcgggccgaatcgccgccatgtcttcctccaccctcgcttggcaggctgaggaa
ccccctgaagacgaggctaatatcattgagaaaatcctctcagtgcgaacggtcaacaaa
gagatggcccccgatgaaccgcctgaagagatggaggagttttacgtaaagtacagaaat
ttctcctatctgcactgtaaatgggcgaccttggaagagctggagaaggacccacgcatt
caccaaaaaatcaagcgcttcagaaacaagcaggcacaaatgaagcacattttcaccgag
ccggatgaagaccttttcaatccagattatattgaggttgatcgggttttagagattgct
atcaccacagatacagaaacaggagaggaagttacacactacctggtgaaatggtgctct
ttgtcatatgaagagagcacttgggagcttcaggaagatgtcgaccctgtaaaaatcaaa
gagttcgaagagctcaagaaagttcctgaaatgaagcatgtggaaaggcctttgccagaa
cagtggcagaaactggaaaaatccagagactacaggaatgggaatcagctccgagaatac
cagctagagggaatgaactggctgcttttcaactggtacaacaggaaaaactgcattctg
gctgatgagatgggcctgggaaagaccatccagtccatcaccttcctctatgagattttc
ctcatgggtctccgaggacctttcctcatcatcgccccactgtccaccatcaccaactgg
gagagagagtttcgcacctggactgaaatgaacgtcatcgtctatcacggcagccagatc
agccggcagatgatcctgcagtacgagatgtaccaccgagatgagcagggaaacatcatg
tctggcgagttcaagtttcaaggcgtgatcactacatttgaaatgataatggctgactgt
ccggagctgaagaagattaactggcgctgcgttgtgatcgacgaggctcatcgtctgaaa
aatcgcaactgtaaactgctggagggactcaaactcatgaacctggaacataaagtcctt
ctcaccggaacgccgttgcagaactcagttgaggaactttttagtctgctgaactttctc
gaaccctcacagttcccttctgaaaccacgttcctggaggagttcggagacctgaaaaca
gaggaacaggtaaagaaactgcaagccattctgaagcccatgatgttgcggagactgaag
gatgacgtggagaagaatctggcccctaaagaggagacaatcatcgaggtggagctcact
aacattcaaaagaaatactaccgtgccattctggagaaaaactttgccttcctcgccaag
ggagcaaaccagcacaacatgcccaacctcatcaacaccatgatggagcttcgcaagtgc
tgcaatcacccgtacctcattacaggcgctgaagaaaagatccttgagagcttcaggaaa
acttacagttcagatgctgcagattttcagctgcaggcaatgattcaggccgctggtaaa
ctagtgcttatcgacaagttgctgcccaaactgctggccggaggacataaagtgctggtg
ttttcccagatggtccgatgcctggatatactggaggactacctcattcagaggaggtac
acgtacgaacgcatcgatgggagagtccgagggaatttacggcaggctgccatcgatcgc
ttcagtaaggtggactctgaccgcttcgtgtttctcctctgcacacgagcaggaggtctg
ggcatcaacctgactgccgctgacacctgcatcatatttgactcagactggaacccgcag
aacgacttgcaggctcaagctcgctgccaccggattggtcaaagcaaagcagtgaaagtg
tatcgccttataactcgaaactcatatgagagggagatgtttgacaaggccagtctaaaa
ctgggactggacaaagctgttctgcaggacatcaaccgcaagggcagtctcaacggggtt
cagcagctctccaagatggaggtggaagatcttctaaggaagggagcgtatggcgcgctc
atggatgaggaagatgagggctcgaaattctgcgaggaggatattgatcagatcctgcag
cggcgcacacagaccatcacaatccagtccgagggcaaaggatcaacttttgccaaggct
agctttgtgtcttcagggaaccgcactgacatctctctggatgatccaaacttctggcaa
aagtgggccaaaattgctgaactggaaattgactccaaggcagaaaaggagagtctggtg
atcgacactcctcgcgtacggaaacagacgcgtcactataattcgttcgaggatgacgaa
ctgatggagttctctgagctggacagtgactcagaggaacggccctgtcgcacaagacgt
ctcagcgatcgcaacagacgctacctccgagcagagtgtttcagagtggagaaaaacctg
ctcatttttgggtggggtcgctggaaggatatcctcaatcatgggcgttttaaatggcac
ttggcagagcgagacatggaggtgctgtgcagggctctgctggtctactgtgtgcggcat
tataaaggagacgacaaaattaagagcttcatctgggacctgatcacacccaccgaagac
ggacacaatcaagcacttcaaaaccactcaggtctgtcagctccagtcccgcggggtcgc
aaaggcaagaagctgaagaaccagttgagtccacctgagctgaagaatgcagactggctg
gcccactgtaacccggaggttgtgcttcaagatgacagctacaagaaacacctcaaacaa
cactgcaacaaggtgctactgagggtgcggatgctgtactatctgaaggtggaagtgctg
ggggatgctgctactcaggctctggaagggatcccatccagtaaactagaggtaactctg
cctgatatcgactacattgagatccccacgatatggtgggatgcagaagcggataaatcg
ctgcttattggagtgcacaaacatgggtatgagcggtataacgccatgcgtgcagatcca
gctctgtgtttcctggagcgggtcggtatgcctgatgtcactgcactgacagtagaacaa
agtggagcagaaactccttcagatgcacctgacggtataagcaagagtgatgaaatcaaa
gaggagaatcatgtcaagtctgaagaattagaagagaaagtagagatcaaggaggagccc
atgtcagatgaaactgcgaaaaatgacaatatggtgacaggttgctttgtagcatctctc
gcaggcgacctaactgcagagttgatggagcaggggcggatacagtggccggcaggctca
gctctcacagcacgtttacggcgtctcattactgcatatcagcgttacacacgccgtgag
ccgctgcgccatgatttcctcttacatgagggaattgcacctgtggcctggcaaattgga
gaattcaggcattgcacaactgaaccggacccgctctttttagagtggcagagaaggtgg
acacgtcgtgagcaggctgacttctaccgtacagtgtcctcatttggagtagtgtatgac
ccagagaagaagaactttgactggagccagtttcgtgctcttgctcgattggagagaaaa
acagatgaaagcttagagagatatttccacagctttgtttcaatgtgtcgcactgcatgt
agactgccaccaagaaaagatgaaggcaatgttgatccttcattatttgtggaccctatt
acagaagagcgagctgcccgaacattatatcgtattgagcttttgagaaaggtccgcgag
caagtattgcgccaccctcttctgggagcacgactgcagctttgtcgccctagtctgtac
ttgccggtctggtgggaatgtggtaaacatgaccgtgatcttctcattggtgttgctaag
catggcttgagtcgaactgacttctacatcctcaatgacccccaactatccttcctggag
gcccaccggaactatgttcataaagaaaaccacagatatccagtcccaggattgccccac
catcattgctgcttatatgatgccaacattggacattgtcagtccccacaacctccggag
tatcaccccacacctgcacaccacacgccaacacagcttgtccatactcatgggcatcac
cagtccagtgaagcatcagaacctggaagttccttgggtataggttcaggaaacagggaa
ggatttttggactgccctccattggatgactctctggagttgggctctttacaacatgaa
ggcttgacttccgatacactacatggcaaatctggtaaagaggccttcaatggattccca
ttcaattctgcaactggtgggcaaaatatgctaaattcatatggtgtgcaaggggagcta
aatgggactcagggagacatggcagactccatagctgggaaacttcgcagtgatgttttg
gtgggagaacaaggatcctcagaggagactgggttaatggctccttcagtggaactagat
gaactccagactccatgggaaagctcagatcatgctgaaacctctgacatgttcaatgag
gctgatcccatcttgggagcacaagctttggaacccagctttttggatgctcctcaacca
gacgacggacaagaaggagatgaaacactaaccgactgcttgagcatgcccagttcagac
tctcagagcaaccctgttgagccgctggcaccgagcttcatgttgttcaaagaccttaat
gttggagagacctctgtggatcaaacagatctatcagccagtcttcctgaatatgtccca
ccaccacctcttggactcccggatgtgagtcttgaccaggcagatcctcttaatgaggag
caagaggacaagcttagtgattccaacatcacaccttgtgttcccagtccagaagaagaa
gcagaaagcatggggttcaattttgagaaagaggacctttctccagacagtcagaaaaca
aaggacactcaagatgatatgccttcaatagagtctccaagtgaaaactgtcttgatgaa
tctcagaaagaagactgcaaggtgccatttgacgattccattgaaagagacctgaaagat
ccttgtgagatggccttggaagaaccttacgaaaagcctctaagagagccagaaaaagtg
cctttagaggagtcttatgatttgacatgtgatgagactctgcaggaaccttgcgatggg
tttcagcaagatgcagtggagcagcagctgatggaaaaaccttcaggagaaacctgcaaa
gaaccatcagattcaattgaaaactgcaatctaaccaacactactctttcagcagattac
cctttacctccctcactcccgtcatctccaactaccttacctgacacctctgtatctccc
gttcttgacgtagtcccaaaacaagagttcctaatggatccaatggtgtcagaagtgaag
cctgagcctgatagcactacccagacccctcaccttgagcaaaccgaagctttggaaata
aaagacaagataaaagatgaaagtgcaaagacaccagtgttattgggagatgtcgattca
ccacgttttgcgctgcccatatgtgagatggcagacagtgttcatgaaataagggaaccc
accattgctcagcttctacaggagaaagcactcttctccttctcagagtggcctaaggac
agagtaatcatcaaccgtattgacagcatctgccacactatcttaaaggggaagtggcct
tcctctagtcagcagtttgaatctcccacttcattggccaacacatgcgtgcccagcagt
gcccaccagagggcaggatttctgcctaacagaatgcctatatctcagagccttaacttc
aacctctcacacacagttccccacatacaaaaggagcggttggtgaccccaacttttatc
ccggagctcaagcgtcccagacgtgggtttgaatttgaagcagaggtccttgccaaacca
agccatcttggagataagatccaggttggcgtctctcatcgtgccaatgctctcctcatt
aatggctggcaggatgccgctattgacctctcgaaaccagcagagctaacagttggtgga
gacagtgggccaatcggtcatatgagccacacggtccagtcagcggcccacaagataacc
gggataggctccatacagggctcactgggattggatatggctggcattttgcaagctggc
ctgattcacccggtcactgggcagattgtcaatggcagtcttcgtcgtgatgattcgatg
ttgaggaggaggagaggacgaagaagaaatgtggagactgctgatctcagctttataaag
ggacgaagcatcaacttgcctgaacaacagagcggggcagagagtatcagccacccggtt
gtgtcctccacatcctcccagtctgaatgtcctccagccaccccgactacactttctagt
cactctgcaacaccctctcccgctgctgcagcggccacagagactctcagtgcgagcgtg
gacagggaaacggccaacaaaggtctgatggaatggctccgacagaaccccaactataac
atggagctttctgcttttccagcgtctcaaaatgcaggcatgttgcacagttttttggat
cgtccgaaacagagaagacatcgctgtaaagaccccagtaagctggatgtaaactctcta
actggggaggagagagtcccagtagtgcacagaaacacaggccgcaggcttgggggtgct
atggctccagccattaaagagctctcccggtggttggatgcaaactcagaatactctgtg
gctcctgattgggcagatgtggtgaagcattcgggttttctaccggagggcaaattcacg
cgcatcctctctggacctgtgagtcgggatcctggtccaagaagaagaggtcgccgcccc
cgaactgagatgcccaaagcccctgaactccccgcgggcatgggttctctcttcatgaac
ggagggctcattggcagcatggatctggttagcttacctaatctccgcaatgtccctggc
atcccattaactggcatcatgggctttcctcacggtttcgccacagccgtatcgtcagat
gatgccaagaatggacttagcatgctgcccatgatgctccacggcatggcgaccgtgcag
cctccaatgtacagcgcacacatgagcgggatgatcagtcaaccgatgtcaacagcaaca
tccacgatgtccaccgtaactgcatcctccactacagcgagtgtgactttgacgaactcc
gcaaccgtaacctcaacctcggtggatagttcagatactgcgcctccacaggataacgca
agctctccagtgagctcagagaaagggaataaggaggacgcaaagcaaggaggggaagac
aagaaaacatcagcctccgtgtcgacggctgccgccacaagcagcagtaatagtagtagc
atcacaagcaccggcagtcatttgacctttaacccctttctaatcccaggaatgtcacat
agtttgttgtatccgcatatgttcttgccaccgggcagtataatggcactacctgctatg
cctgcagcagacagcacaggcagccctaagaggaagaggaagaaggttagagaggaagga
ctggtggaaggaagcgggattcttggcacacagattgatggagaggaatcgaagggggtt
aaagatgaacagacgccagaactgaagagccaagaggccagagtggaagaaaatggacct
gatgtagatttggctcctactaaccttataaaagctccgtctgaggataaaaggactgag
gaaaacgaaaaaaccgagcaagatgctcaaggagactag
DBGET
integrated database retrieval system
