KEGG   Danio rerio (zebrafish): 570965
Entry
570965            CDS       T01004                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04068  FoxO signaling pathway
dre04136  Autophagy - other
dre04140  Autophagy - animal
dre04621  NOD-like receptor signaling pathway
dre04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    570965 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    570965 (atg12)
   04136 Autophagy - other
    570965 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    570965 (atg12)
   04622 RIG-I-like receptor signaling pathway
    570965 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    570965 (atg12)
   04121 Ubiquitin system [BR:dre04121]
    570965 (atg12)
   03029 Mitochondrial biogenesis [BR:dre03029]
    570965 (atg12)
Membrane trafficking [BR:dre04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    570965 (atg12)
Ubiquitin system [BR:dre04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   570965 (atg12)
Mitochondrial biogenesis [BR:dre03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    570965 (atg12)
SSDB
Motif
Pfam: APG12 ATG8 Thioredoxin_15
Other DBs
NCBI-GeneID: 570965
NCBI-ProteinID: NP_001233129
ZFIN: ZDB-GENE-071205-7
Ensembl: ENSDARG00000069545
UniProt: F5ATB4
LinkDB
Position
16:13883934..13888546
AA seq 120 aa
MSDNAESPTENPKDEHSLQHAVTDHSESSDEKKKIDVLLKAVGVTPIMKTKKWSVERRRT
IQSLAQFISRFLKLEPSEQLFIYVNQSFAPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaacgcagaatctcctacagaaaacccgaaagatgaacattcgcttcagcac
gctgtcacagatcactctgagtcatcggacgagaagaaaaagattgatgtgcttttaaag
gcggtcggtgtcacacccatcatgaagaccaaaaaatggtctgtggagagaaggaggacg
atacagtcactcgcccagttcatctcacgcttcctcaagctggagcccagcgaacagttg
tttatttatgttaatcagtcgtttgcgccatcaccggaccaagaagttggtgtgcttttt
gagtgtttcggaagtgacggcaaactagttcttcattactgcaagtctcaggcctgggga
tga

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