Danio rerio (zebrafish): 570989
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Entry
570989 CDS
T01004
Symbol
rfx3
Name
(RefSeq) transcription factor RFX3
KO
K09173
regulatory factor X 1/2/3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
570989 (rfx3)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Other basic domains
RF-X
570989 (rfx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
Dimeth_Pyl
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
570989
NCBI-ProteinID:
NP_001073517
ZFIN:
ZDB-GENE-061103-253
Ensembl:
ENSDARG00000014550
UniProt:
A0JMF8
B2GSV8
LinkDB
All DBs
Position
10:complement(908128..949907)
Genome browser
AA seq
765 aa
AA seq
DB search
MQTPEAGADSTVSTVPLQTSVPVQPAVSGQQVASQVPVQQQAQTVQQVQHVYQAQVQYVQ
EENNSVYTNGTIRAYSYSEPQLYNQNSSGNYFDTQGGGGSAAQVSTVVSTHSMANNGNGT
GALAMGLTGGQIISSSGAYLIGGNSMDGSAPHGAAQTTRASPATIEMAIETLQKSEGLSS
QRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFM
GLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKMDGV
SGDNFSSAGQHTPSAAEQTFIAQSQHHQQFLDGSRALPEFVELDLGEAVDGVGPEDVKAL
QTLYREHCEAILDVVVNLQFNLIENLWQTFWRYSASSSVEGVTITENSGLSEIEGRLPRA
RLILLCRHEAVHKWMNTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLTNA
MSSIPPRMINTKVSAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFAN
VQEQASWVCQCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQILKPYEDKPTLPKA
ARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETAIGV
MGEFQDLNTMSPANIDKDEVSEMDSDLDEEMEEADEPLAKREKVEADVIQVLQVGAMEDG
SSAVVGIVQPSMINSLPPTTNNHSEHILSTGTSTIRHVGNTYASV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccccagaggcaggcgctgactccaccgtgtccaccgtgcccctccagaccagc
gtgcctgtgcagcctgcggtcagtggccagcaggtggcgtctcaggtgcccgtccagcag
caggcgcagactgttcaacaggtccagcatgtgtatcaagcacaggttcagtatgtgcag
gaggaaaacaacagcgtttacaccaacggaaccatacgggcgtactcgtactcggagcca
cagctctacaaccagaacagcagcgggaactacttcgacacgcagggcggcggaggcagc
gcggcacaggtcagcaccgtagtgtccactcacagcatggccaacaacggcaacggcacc
ggcgctctggctatggggctcaccggaggccagatcatcagcagctcaggagcttatctg
attggaggaaactccatggatggctccgcccctcacggcgccgcacagaccaccagagcc
tcccctgctacgattgaaatggcgattgagacgctccaaaagtctgaaggtttatccagt
cagagaagttcgctgctcaacagccatctgcagtggctgctggataattacgagacagca
gagggcgtgagtctgccgcgctccaccctctacaatcactacctgcgccactgtcaggag
cagaagctggaccctgtcaatgctgcgtccttcgggaagctcatccgctccatcttcatg
gggctgcgcacacgccgcctggggacacgagggaactcaaagtatcattattacgggatt
cgtgtgaagccggactctcctctgaaccgcttgcaggaggacatgcagtacatggcactg
agacagcagcccgtccagcagaagcagagatttaagcctgtgcagaagatggacggagtt
tcgggagataacttcagcagcgctggacagcacacacccaatgctgcagagcagaccttc
atcgctcagagccaacatcatcagcagttcctggatggctccagagctctgccggagttt
gttgaactggatcttggagaggcagtggacggcgtcggcccagaggatgtcaaagccctt
cagacgctctacagagaacactgcgaggccatcctggatgtagtggtgaacctgcagttc
aatctgatcgagaacctgtggcagacgttctggcgctattctgcctccagctctgtagag
ggcgtcacaatcacagaaaacagtggtttgagtgagatcgagggccgtctgccgcgggcc
aggctgattctgctgtgccgacatgaggccgtgcacaagtggatgaacacctgcgatcac
ctgatgtaccaggccctcgtggagatcctcatcccggacgtcctgagacccattcctagt
gccttgactcaagccatccgtaactttgccaaaagccttgagggctggctcaccaatgcc
atgagcagcattcccccgaggatgatcaataccaaggtttccgctgttagtgccttcgct
cagaccctccgcagatacacgtccctgaatcatctggcgcaggcggctcgcgcagtcctg
cagaacacctcgcagatcaaccagatgctcagcgatctcaaccgggtcgacttcgccaat
gtgcaggagcaggcctcatgggtgtgccagtgtgaagagggtgtcgtccagcgcctcgag
caggattttaaggccaccctgcagcagcagagctcactggagcagtgggccgcctggctg
gataacgtggtcacccagatactgaagccgtacgaggacaagcccaccctgcccaaagct
gcacgccagttcctgctcaagtggtccttctacagctctatggtcatcagagatctgacc
ctccgcagcgctgccagcttcggctcgttccacctgatccggctgctgtacgacgagtac
atgttctacctggtggagcatcgcgtcgcccaggcaacaggagagacggccatcggagtc
atgggcgagtttcaggacctgaacaccatgtcacctgccaacatcgacaaagatgaggtg
agcgagatggacagcgatctggacgaggagatggaggaggcggacgagccactggccaag
cgggagaaggtggaggcggacgtgatccaggtgctgcaggtaggggcgatggaggatggc
agcagcgcggtggtgggcatcgtccagccgagcatgatcaactctctgcccccgaccacc
aacaatcacagcgaacacatcctcagcaccggaaccagcactatccgccatgtgggaaac
acctacgcctccgtctaa
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