KEGG   Danio rerio (zebrafish): 571294
Entry
571294            CDS       T01004                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    571294 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    571294 (wdr41)
Membrane trafficking [BR:dre04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    571294 (wdr41)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st EIF3I Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th WD_LRWD1 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 571294
NCBI-ProteinID: NP_001025432
ZFIN: ZDB-GENE-050706-152
Ensembl: ENSDARG00000009851
UniProt: F1Q4U0 Q4KMJ3
LinkDB
Position
21:8960662..8985025
AA seq 449 aa
MLRWILGGREAQGAVEKSAALFIGEEQPKNCFTEMQVLKGHFDIVRFLVQIDDLRFASAG
DDGLVLIWNVETGDCLLELRGHTQQITAMTSYTFIRGGNTHTALITASSDRTLSLWDPDS
GNRVQNISDLQSSVKCLLVLNLLDMWLSGGNELCVWNQDFELQCKTVHHSDTGISAMVEL
PKNFIAAAMDKEIVIFKLNVSGSDVAVMAIRHLADHQDTIHSLISINDGLFASGSHIGEL
IIWDSVDWTIQGYELILWEESKGDGHSEVKVTQQKQIERSIQHMSSDGELLVAAVGSGLY
VYNVLTKTVVAYRKMAHDSNVLHTMIQTDGLMSCSEDGSVRMWELQDLPLPAEPASSGFF
GMFGTFGRSSKHAGPPAKKLPEVPDLRSLELIGDLIGHSGAVQMFVSFEQKALVTCSTDH
LLIVWKDGELQSQLRSLAVFQKLEENQQL
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgctgcgatggattctgggcggtcgagaggcgcagggagcagtggagaagagcgcggcg
ctgttcattggggaggaacagcccaaaaactgcttcacggagatgcaggtgctgaaagga
cactttgacattgttcgatttctggtgcagattgatgacttaaggtttgcgtctgcaggc
gatgacggcctcgtgctgatttggaatgttgagactggtgattgtttgttggagttgcgc
ggccacacacagcagatcacagcgatgacatcatacaccttcatcagaggaggaaacaca
cacacagctctcatcacggcctcttcagatcgaacactcagtttgtgggatccagattca
ggaaaccgagtgcagaatatatcagatctgcagtcctctgtaaagtgtttgctggtgttg
aatctactggacatgtggctctcaggaggaaatgaactgtgtgtttggaaccaagacttt
gagctgcagtgtaaaacagttcatcacagtgacacaggaatttctgcaatggtggagcta
ccgaagaacttcatcgcagctgccatggataaagagattgtgatcttcaagttgaacgtg
tctggctcagatgttgcagtgatggccatccgtcatctagcagaccatcaggacaccatt
cattctctcatcagcatcaacgatggcttgtttgcgagtggctctcatatcggtgagctc
atcatttgggattcagttgattggacgatccagggttatgagctcatattgtgggaggag
tcaaagggagacggccattcagaggtcaaggtgactcagcagaagcaaatcgagaggtcc
attcaacacatgagctcagacggagagcttttagtggcagcggtgggcagtggtctgtat
gtttataatgtgctgacgaagactgtggtggcctacagaaaaatggcccacgactccaac
gtcctgcacaccatgatccagacggacgggctgatgtcgtgttctgaggacggcagcgtg
aggatgtgggaattacaggacctcccccttcctgctgagcccgcctcctcagggtttttc
gggatgttcggcactttcggcaggtccagcaagcacgcaggacccccagccaagaaactc
ccagaagtcccagatctgcgttcattggagctcatcggagatctgattggccactctgga
gccgtgcagatgtttgtgagttttgagcagaaggctctggtcacctgctccactgatcat
ctgctgatcgtctggaaggatggagagcttcagtctcagctgcgcagcctcgccgtcttc
cagaaactggaggaaaaccagcagctctga

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