Danio rerio (zebrafish): 571349
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Entry
571349 CDS
T01004
Symbol
cntn4
Name
(RefSeq) contactin-4 precursor
KO
K06761
contactin 3/4/5/6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
571349 (cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
571349 (cntn4)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
Contactins
571349 (cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
Others
571349 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Sp38
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Ig_6
NDNF
Motif
Other DBs
NCBI-GeneID:
571349
NCBI-ProteinID:
NP_001073520
ZFIN:
ZDB-GENE-060929-776
Ensembl:
ENSDARG00000098161
UniProt:
Q08C52
Structure
PDB
PDBj
LinkDB
All DBs
Position
6:47922892..48368111
Genome browser
AA seq
1028 aa
AA seq
DB search
MKLLWKLLVLQSFLGCLAGNALQNLVFSKQPGSIVSPVDSMEKSREVVFSCEAQGDPPPF
YRWKLNGSVVNPKPGSHHSLTGGNLRINHLNKDMDAGTYQCLASNSFGTIVSREASLTFA
YLENFKTHKRSSVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSIVKQDSRRFVSQETG
NLYIAKVEPSDVGNYTCVVTNTVTKTQVQGPPTPLILRTDGVMGEYEPKIEVQFPEVVQV
AKGSTVRLECFALGNPVPSISWRRVDGVPFARKVDVRKTSGVMEIPYFQQEDAGTYECVA
ENSKGRNSVQGKLSFFASPQLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNGENLE
PTEERVQVINGALSITHLALSDIGMYQCVAGNKYGEVYSNAELRVIAVAPDFSQNQLKSH
TLVKEGGDVLIECKPKMSPRGSISWRKGNDALRESSRIAVLESGSLRISNVSKSDAGSYT
CVARNQFGEASSLGNLLVKEPTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFTWFFN
EQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGP
PGPPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTVPEVVGGSH
LTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVSGGGGSRSEL
VITWEPVPEELQNGAGFGYVVAFRPFGSTGWMQAAVPSPEASKYVFKNETILPFSPFQVK
VGAYNNKGEGPFGPVITIYSAEEEPGRAPSRLRAKSLSASDVEVSWKALPWSTSKKRVLG
YELRYWEKNEKEDASSVLRTVGNRTLAIIQGLKGSSTYYITVRAYNTAGTGPPSPVVNIT
TKKPPPSQPPSKVMWNTSNSKIILNWEQVKPLENESEVMGYKVMYRRNRFSRPNVMETNT
TSVELSLPTDEEYIIQIKPFGEGGEGSSSRQITIPRISGPNAIGSASSVSTLSALSTIAL
SLTARTSL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctatggaaactgttggttctgcagtcgttcctggggtgccttgcaggcaat
gcgctgcaaaacctggtgttctccaagcagccgggcagcattgtatttccagtggactct
atggagaagagcagggaggtggttttcagctgtgaggcgcaaggtgaccctcctccgttt
tacaggtggaagctaaatggcagcgtggtcaaccctaaacccggctcccatcacagcctc
actggaggaaaccttcgcatcaaccacctcaataaagacatggacgccgggacgtaccag
tgccttgcttctaactccttcgggacgattgtcagcagggaggccagtctaacctttgcc
tacttggaaaacttcaaaacccacaagcggagttcagtgtctgttcgggaaggccaggga
gtggtgcttctctgtgggcctcctccgcactcaggagctttgacgttttcctggattttt
aacgagtacccatcaatcgtgaagcaggactctcgtcgctttgtgtctcaggagacaggg
aatctgtatatcgctaaagttgagccgtcggatgtaggaaactacacctgtgtcgtgact
aataccgtcaccaaaacacaagtacaagggccgccaactccactcatactgcgcacagat
ggtattatgggagaatatgagccaaagattgaagtacagttcccggaaattgtgcaagtg
gctaaaggttcaactgtgcgcctggagtgttttgcattaggaaatcctgtaccatccata
agctggcgtcgagtagacggagtccctttcgctcgtaaggtggatgtaagaaaaaccagc
ggcgtgatggaaatcccttacttccagcaggaggacgcgggtacatacgagtgtgtggca
gaaaacagcaaaggaagaaactccgtgcagggaaagctctctttctttgcctcgcctcag
ttaattgagaagccgcaggatgtgcagaagcccatcgatgactctctggtgtgggaatgc
aaggccacggggaaaccaaaaccctcgtacaggtggatgaagaatggagaaaacctggag
cccactgaggagagggtgcaggtcattaatggcgccctgtccatcactcacctggcactc
tctgatattgggatgtaccagtgtgtggctggaaacaagtatggagaagtctattccaat
gctgaactcagagttatcgccgtcgctcccgatttctcccagaaccagctgaagagtcac
actttggtgaaagaaggtggcgacgtcctcatcgaatgcaagcccaaaatgtctccccga
ggctcgatatcctggcgcaaaggcaacgacgccctcagagaaagcagcaggattgctgta
ttggagagtggaagccttcggatatccaatgtcagcaaatctgatgctggatcgtacaca
tgtgtcgcccataaccagtttggtgaagccagcagcttaggaaacctgcttgtgaaagag
ccaacgatcattaccacagctccaaacacactggacgtgacggtcggcgaaagcatcatt
cttccatgtcaggtgtcatacgacccctcgctggagctgaagtttacctggttcttcaac
gagcagctcattcacttcggcagccatggaggatacttcgaaaaagttggcggacaacac
tcagcaggtgacatcatgatccgcaacattcagctgaggcatgctgggaaatacacgtgt
gcagtgcagaccaaggtggacagcagctccatcgcaactgacctgattgtcagaggtccc
cccggcccccctaccagcatccatgtggaagaaatcacagataccactgccactctctcc
tggaggcctggtcctgataatcacagtccaattactgcctacaccatccaggctagaacc
cctttctccctcggctggcaagctgttagcacagtgccagaggtggtggggggctcacat
ctcactgctacagtaattgagctcaacccctgggtggagtacgagttcagagtgttggca
agcaatgcagtgggcacaggagagcccagcaaaccctccaagaaagcccggaccaaagac
acagttcccaaggtcacgccagccaacgtgagcggaggaggtggcagtcgatcagagtta
gtcatcacttgggagcctgttcctgaagagctccagaatggagcaggctttggttacgtc
gttgctttccggccctttggctccaccgggtggatgcaggcggcagttccctctcctgaa
gcctccaaatacgtgttcaaaaacgagaccatcttacccttctctccgttccaagtcaaa
gtcggggtgtacaataacaagggggaaggaccttttggaccggtgatcaccatctactct
gctgaggaggagcctggacgagcacccagtcgactcagagccaagagtctttcagcgtct
gacgttgaggtgtcctggaaagccctgccctggagcaccagcaaaaagcgtgttctcgga
tacgagttgagatactgggagaagaatgagaaggaagatgcgtctagcgttctgaggaca
gttggaaaccgaacgctggctattattcagggcttaaaaggaagtagcacttattatata
acggtgagagcctacaacacagcaggaacaggcccaccgagtccagtggtcaacattact
accaaaaagcctcctcccagccagccgccatcaaaagtcatgtggaatacatccaactct
aaaattatcctgaactgggaacaggtgaagccactggaaaatgaatcagaggttatggga
tataaggtcatgtacaggaggaaccgcttcagcagacccaacgttatggagaccaacacc
acctcagtggagctttccctgcccacagatgaggagtacatcatccagatcaaaccgttc
ggagagggaggagaaggcagcagcagccgacaaatcaccattcccagaatatcaggtccc
aacgccatcggctctgcttccagtgtgtccactctctcagctctcagtacaatagctctg
tctctcacagctcgcacatctttatga
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