KEGG   Danio rerio (zebrafish): 571349
Entry
571349            CDS       T01004                                 
Symbol
cntn4
Name
(RefSeq) contactin-4 precursor
  KO
K06761  contactin 3/4/5/6
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    571349 (cntn4)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dre00537]
    571349 (cntn4)
Cell adhesion molecules [BR:dre04515]
 Immunoglobulin superfamily
  Contactins
   571349 (cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dre00537]
 Others
  571349 (cntn4)
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set Ig_DSCAM-DSCAML_C Ig_C17orf99 Sp38 Pur_ac_phosph_N C2-set_2 Tissue_fac Ig_6 NDNF
Other DBs
NCBI-GeneID: 571349
NCBI-ProteinID: NP_001073520
ZFIN: ZDB-GENE-060929-776
Ensembl: ENSDARG00000098161
UniProt: Q08C52
Structure
LinkDB
Position
6:47922892..48368111
AA seq 1028 aa
MKLLWKLLVLQSFLGCLAGNALQNLVFSKQPGSIVSPVDSMEKSREVVFSCEAQGDPPPF
YRWKLNGSVVNPKPGSHHSLTGGNLRINHLNKDMDAGTYQCLASNSFGTIVSREASLTFA
YLENFKTHKRSSVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSIVKQDSRRFVSQETG
NLYIAKVEPSDVGNYTCVVTNTVTKTQVQGPPTPLILRTDGVMGEYEPKIEVQFPEVVQV
AKGSTVRLECFALGNPVPSISWRRVDGVPFARKVDVRKTSGVMEIPYFQQEDAGTYECVA
ENSKGRNSVQGKLSFFASPQLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNGENLE
PTEERVQVINGALSITHLALSDIGMYQCVAGNKYGEVYSNAELRVIAVAPDFSQNQLKSH
TLVKEGGDVLIECKPKMSPRGSISWRKGNDALRESSRIAVLESGSLRISNVSKSDAGSYT
CVARNQFGEASSLGNLLVKEPTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFTWFFN
EQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGP
PGPPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTVPEVVGGSH
LTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVSGGGGSRSEL
VITWEPVPEELQNGAGFGYVVAFRPFGSTGWMQAAVPSPEASKYVFKNETILPFSPFQVK
VGAYNNKGEGPFGPVITIYSAEEEPGRAPSRLRAKSLSASDVEVSWKALPWSTSKKRVLG
YELRYWEKNEKEDASSVLRTVGNRTLAIIQGLKGSSTYYITVRAYNTAGTGPPSPVVNIT
TKKPPPSQPPSKVMWNTSNSKIILNWEQVKPLENESEVMGYKVMYRRNRFSRPNVMETNT
TSVELSLPTDEEYIIQIKPFGEGGEGSSSRQITIPRISGPNAIGSASSVSTLSALSTIAL
SLTARTSL
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaagttgctatggaaactgttggttctgcagtcgttcctggggtgccttgcaggcaat
gcgctgcaaaacctggtgttctccaagcagccgggcagcattgtatttccagtggactct
atggagaagagcagggaggtggttttcagctgtgaggcgcaaggtgaccctcctccgttt
tacaggtggaagctaaatggcagcgtggtcaaccctaaacccggctcccatcacagcctc
actggaggaaaccttcgcatcaaccacctcaataaagacatggacgccgggacgtaccag
tgccttgcttctaactccttcgggacgattgtcagcagggaggccagtctaacctttgcc
tacttggaaaacttcaaaacccacaagcggagttcagtgtctgttcgggaaggccaggga
gtggtgcttctctgtgggcctcctccgcactcaggagctttgacgttttcctggattttt
aacgagtacccatcaatcgtgaagcaggactctcgtcgctttgtgtctcaggagacaggg
aatctgtatatcgctaaagttgagccgtcggatgtaggaaactacacctgtgtcgtgact
aataccgtcaccaaaacacaagtacaagggccgccaactccactcatactgcgcacagat
ggtattatgggagaatatgagccaaagattgaagtacagttcccggaaattgtgcaagtg
gctaaaggttcaactgtgcgcctggagtgttttgcattaggaaatcctgtaccatccata
agctggcgtcgagtagacggagtccctttcgctcgtaaggtggatgtaagaaaaaccagc
ggcgtgatggaaatcccttacttccagcaggaggacgcgggtacatacgagtgtgtggca
gaaaacagcaaaggaagaaactccgtgcagggaaagctctctttctttgcctcgcctcag
ttaattgagaagccgcaggatgtgcagaagcccatcgatgactctctggtgtgggaatgc
aaggccacggggaaaccaaaaccctcgtacaggtggatgaagaatggagaaaacctggag
cccactgaggagagggtgcaggtcattaatggcgccctgtccatcactcacctggcactc
tctgatattgggatgtaccagtgtgtggctggaaacaagtatggagaagtctattccaat
gctgaactcagagttatcgccgtcgctcccgatttctcccagaaccagctgaagagtcac
actttggtgaaagaaggtggcgacgtcctcatcgaatgcaagcccaaaatgtctccccga
ggctcgatatcctggcgcaaaggcaacgacgccctcagagaaagcagcaggattgctgta
ttggagagtggaagccttcggatatccaatgtcagcaaatctgatgctggatcgtacaca
tgtgtcgcccataaccagtttggtgaagccagcagcttaggaaacctgcttgtgaaagag
ccaacgatcattaccacagctccaaacacactggacgtgacggtcggcgaaagcatcatt
cttccatgtcaggtgtcatacgacccctcgctggagctgaagtttacctggttcttcaac
gagcagctcattcacttcggcagccatggaggatacttcgaaaaagttggcggacaacac
tcagcaggtgacatcatgatccgcaacattcagctgaggcatgctgggaaatacacgtgt
gcagtgcagaccaaggtggacagcagctccatcgcaactgacctgattgtcagaggtccc
cccggcccccctaccagcatccatgtggaagaaatcacagataccactgccactctctcc
tggaggcctggtcctgataatcacagtccaattactgcctacaccatccaggctagaacc
cctttctccctcggctggcaagctgttagcacagtgccagaggtggtggggggctcacat
ctcactgctacagtaattgagctcaacccctgggtggagtacgagttcagagtgttggca
agcaatgcagtgggcacaggagagcccagcaaaccctccaagaaagcccggaccaaagac
acagttcccaaggtcacgccagccaacgtgagcggaggaggtggcagtcgatcagagtta
gtcatcacttgggagcctgttcctgaagagctccagaatggagcaggctttggttacgtc
gttgctttccggccctttggctccaccgggtggatgcaggcggcagttccctctcctgaa
gcctccaaatacgtgttcaaaaacgagaccatcttacccttctctccgttccaagtcaaa
gtcggggtgtacaataacaagggggaaggaccttttggaccggtgatcaccatctactct
gctgaggaggagcctggacgagcacccagtcgactcagagccaagagtctttcagcgtct
gacgttgaggtgtcctggaaagccctgccctggagcaccagcaaaaagcgtgttctcgga
tacgagttgagatactgggagaagaatgagaaggaagatgcgtctagcgttctgaggaca
gttggaaaccgaacgctggctattattcagggcttaaaaggaagtagcacttattatata
acggtgagagcctacaacacagcaggaacaggcccaccgagtccagtggtcaacattact
accaaaaagcctcctcccagccagccgccatcaaaagtcatgtggaatacatccaactct
aaaattatcctgaactgggaacaggtgaagccactggaaaatgaatcagaggttatggga
tataaggtcatgtacaggaggaaccgcttcagcagacccaacgttatggagaccaacacc
acctcagtggagctttccctgcccacagatgaggagtacatcatccagatcaaaccgttc
ggagagggaggagaaggcagcagcagccgacaaatcaccattcccagaatatcaggtccc
aacgccatcggctctgcttccagtgtgtccactctctcagctctcagtacaatagctctg
tctctcacagctcgcacatctttatga

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