Danio rerio (zebrafish): 571621
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Entry
571621 CDS
T01004
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
dre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
571621 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
571621 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
571621 (nup153)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
571621 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
zf-RanBP
Pgp3_N
Motif
Other DBs
NCBI-GeneID:
571621
NCBI-ProteinID:
NP_001313313
ZFIN:
ZDB-GENE-030131-4581
Ensembl:
ENSDARG00000099972
UniProt:
A0A0R4IVZ0
LinkDB
All DBs
Position
19:complement(46019282..46059009)
Genome browser
AA seq
1436 aa
AA seq
DB search
MAATGGGKIRSRRHHIASKPYAKGKQQPGLITRVTDTVKSIVPSWLQKYFRNGEGPEGGA
SAAGVEHNNMTPPPNGSDEAPLRDGRDSPEPSTSNTEPSTSRASLNFQEALSRPPLNRTH
LQFPSLDGSPALGGSSSLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQHEDDNIST
TSGFSSRASDKDVPTSKTVPLLWSPETERTHSGSQTAHSGLKKPAFNLSVFGTSSSSVLN
SSVLNSSQLGDSPFYPGKTTYGGASAMRTARSRPATPYQPPVRRQIKAKPTGAQPCGVTS
ATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDISNYQAKRKRLEPSVPPVQ
KLVVPAAAAVSGNRSISFRPSLTPGGVSRGVEKTSRETPVRQSPPISEPAQAPPPSTSTL
SYPLSSTPAANSAALGGGKMKRERAIRPSSKRPDDEVAEEPDLPPASLPSNFTLPTFTFS
TPPPTSSLKSSTAPLITVSEEPAANKQPAAPSTPPSAPFTFSSPIVKATAASPPSFSPSS
GFTFSAPTMKMGPSFSNGKIVPSVAPVKSVVIEEKEFEGPFKPAKVLKQGSVLDILKGPG
FASPSQNSTDKPLQSTSTTTSSPFSGFGDKFRPPAGSWNCGTCMLQNKPSDKKCVACLAP
QPNTDSSKSDSKPAEAPASISSLFAPPAGSWECDTCLVSNKPDAVKCVACDTAKPGTGVK
SSLTLLAASESSSSTTTTATTTAAALTSTGLLGLGDKFKKPEGAWDCDVCMVQNKAQDLK
CVACLTAKPGAAAAPLSTPASAPVSSAAPLLGFGDKFKKPEGSWECDVCCVQNKADDQQC
VACQSAKPGAKIESKGFSSSFGVQSNSTDSNTSGFKFGTGSTDSSSSSAGLKFGGTFSDS
STTGGIKFGFGLSSTSSEGFKFGGSSSDAGGAKLSSTLSESTATKESSTKSFAFGGSADD
TLEKKSKTQESNTGFKFGGGSGMASGSENSSFLFGAKPSEKGSSNPSFSFPVPQSKVEKD
APSETPPVSNTTTTTTAANALPVFGKSLVAESSAPKFGEPATKEQTLVTSTFTFGKPEEK
KDTSAPSSTFLFGSSKEAEKPTPNLGFAFSEPDPPKDFPKPALTFGKPAESTEPPKPSFG
FGQSLTETSAPKPSFGFMANSTSSTPASSSSTPSLFGTPTTSSLAPTPAPTSTFVFGQNS
SSELNVGKTFVFGQQQQDSQPAPPAAPSAAPAQPFQFGSGSNSSTPSFTFGAAASSTPAS
AAPAPSANPSPFVFSSAAPSSGFGSGQTPIFGQSASQPSAPAFGSAAPSFSASATPASTF
GAKPSSAPVFGQQANAAPTFGSTAASTGQGGFQFGSTGGFGASATSNSVFNFGGGSAAPA
ASPAMPALNPPAGGGFGFSPTPAFNIGSAKSSFTASPAGQNSIAGRKIKTAVRRRK
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatccagaagacaccacattgcgtcaaaaccc
tacgccaaaggcaaacagcagcctggcctgatcactcgagtgacggatacagtgaagagt
atagtcccctcctggcttcagaaatacttcagaaatggagaaggtccagagggtggagct
tctgcagcaggggtggagcacaacaatatgactcctccccccaacggcagtgacgaagcc
ccgctccgagacggacgagactctccagagccgagcacaagtaacacagaaccatctaca
agcagagcgtcgctgaacttccaggaagctctgtcgaggcctccgctcaaccggacccac
cttcagttcccctccctggacggctccccagctttgggcggctccagctctcttttctcc
cagccctccacatccacagcacccttctcagggagccctttcgctgtgacctccaacttc
tcactggttaaagagatcaaggattccagctctcagcatgaggatgacaacatctccacg
accagtggcttctcatcacgtgcatctgataaagatgtgcccacgtcaaagactgtgccg
ctcctctggtccccagagacagaacgcacccactctggatcgcagacagcccactccggg
ctcaagaaaccagccttcaacctgtcagtctttggcacttcctcatcatctgtattgaac
agttcagtgctgaactccagtcagttgggggattcgccattttaccctgggaagaccaca
tatggaggagcttctgcgatgagaaccgctcgatcacgcccagctactccttatcagcct
cctgttaggagacagatcaaggcaaagccaaccggagctcagccctgtggagtgaccagt
gccacagcgagacgcatcctgcagtccctggagcgcatgtccagtcctcttgctgatgca
aagagaattccgtctacagtttcatcacctctgtcagcttcattaaatcacacagacctt
gacatctcaaattaccaggcaaagaggaaaaggctggagccgtcagttcctcctgtgcag
aagctggtggtccctgcagctgctgcagtgtctggtaaccgctcaatatcctttagacca
tcactcaccccaggtggagtgagcagaggagtggaaaaaaccagcagagagactccggta
agacaatcccctccgatttcagaacccgcccaggctccccctccaagcacaagtactttg
tcgtaccccttgtccagcaccccggctgctaacagtgctgctctaggaggtggcaaaatg
aagagagaaagggccatcagaccttcatccaaacggcctgatgatgaggttgctgaggaa
ccagatctgccgccagcttctcttcccagcaatttcactttgccaacatttactttctcc
actcctcctccgacctcctcgctcaaatccagcacagcaccacttataaccgtctcggag
gagccagcagcgaataagcagccggctgcaccatccacaccaccatctgcccccttcacg
ttctcttcacctatcgtcaaggcaacagctgccagccctccatctttctctccatcgtct
ggattcaccttcagtgcacctactatgaaaatgggtccctctttctccaatgggaaaatt
gttccatcagtagcaccagtcaaatcagtggtcattgaagaaaaggagtttgaaggacca
ttcaaacctgcaaaggtcttaaaacagggcagtgtgttggacatacttaagggtcctgga
tttgcatccccctctcagaattcgactgataaacctttacagtccacatcaacaacaaca
tcatctccattttctggttttggtgacaagtttaggccaccggcaggatcatggaactgt
ggaacttgcatgttgcaaaacaagccctcggacaaaaagtgtgtggcttgtctcgcacca
cagcccaacacagactcttctaaatcggacagtaaacccgcagaagctcctgcaagcatc
agttccctctttgctcctccggctggtagctgggaatgtgacacatgtctggtcagtaac
aaaccggacgcagttaaatgtgtagcttgtgacacagccaaacctggaactggagtaaaa
tccagcctgactctactggctgcctctgagtcttcatcctctacaaccaccacagcaacc
accactgctgctgctttgacttcaactggactgttaggattgggggacaaatttaagaag
ccagaaggggcttgggattgtgatgtgtgcatggttcaaaataaggctcaggatctgaaa
tgcgtagcctgtctgaccgctaaaccaggagctgcagctgcaccgctctcgactccggca
tctgcacctgtaagctctgctgcgcctttgttaggattcggagacaagtttaagaaacct
gaggggagctgggagtgtgacgtgtgctgtgttcagaataaagcagacgaccagcagtgt
gtggcctgccagtcagcaaaaccaggagctaaaatagagtccaaaggttttagttcatct
tttggcgttcagtccaacagcacagactcaaatacatctggttttaagtttggtaccggc
tctacagactcctcttcctcctctgctggactaaagtttggaggtactttctcagattca
tccaccacaggaggaattaaatttgggtttggattgtcgtccacgagttcagagggcttc
aaatttggaggctcgtcctcagatgcaggtggtgctaaactttctagcaccttatcagaa
tccacagccacaaaagagagttcaacaaagagcttcgcgttcggtggatctgcggatgac
acgcttgaaaaaaagagtaaaactcaggagtctaatacaggatttaaatttggtggcggg
agtgggatggcttctggctcggaaaactcttcgtttttatttggagctaaacccagtgag
aagggaagctcaaatccatcttttagtttccctgtgcctcagtccaaggttgaaaaagat
gctccatcagagacaccaccagtttcaaacaccaccaccaccaccacagcagcgaacgcg
ctccctgtatttggcaaatctttagtcgcagaatcttctgccccaaagtttggggaaccg
gcaacaaaagagcaaacgctggtgacgtctacttttacctttggaaagccagaagagaaa
aaggacacctctgcaccctccagtacattcttatttggttcttctaaggaagctgagaaa
ccaacaccaaacctaggcttcgcttttagtgagccagaccctccaaaggatttccccaag
cctgcgcttacatttgggaaacctgccgagtcgacagaacccccaaagccatcatttggt
tttggacagagtttgacagaaacttctgctccaaagccctcttttggcttcatggccaac
tccacctccagcaccccagcctcctccagctccacccccagccttttcggcactcccacc
acctcttccctggctcccacgcctgctcccactagcacctttgtgtttggccagaattcc
tcctctgaactaaatgtgggaaagactttcgtgttcggacagcagcagcaggacagtcag
ccggctcctcctgcggccccttctgctgccccagcacagcctttccagtttggctcgggc
tcaaactcatccaccccttctttcacatttggtgctgctgcgtcctccacccctgcctct
gctgctccagctccgtctgcaaacccgtccccatttgtcttcagttctgctgctccttca
tctggctttggctccggacagactccaattttcgggcaaagtgcgtctcaacccagtgct
cctgcgttcggatcagcagcaccttcgttttcggcctctgccaccccggcttctacattc
ggagccaaacccagttctgcccctgttttcggtcagcaagccaatgctgcgccgacgttt
gggtcaactgctgcctccacaggacaaggaggtttccagtttggaagcactggtggtttt
ggagcatcagcgaccagcaacagtgtgtttaactttggtggaggatcagcagctcctgct
gccagtccagccatgcccgcgttaaaccctcctgctggtggaggcttcggctttagcccg
actcctgcttttaacattgggtcagcaaagagttccttcaccgcctcacccgctggacag
aattcaatcgcaggacgcaaaatcaaaaccgctgttcggcgcaggaagtaa
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