Danio rerio (zebrafish): 571904
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Entry
571904 CDS
T01004
Symbol
gpc6a
Name
(RefSeq) glypican-6a precursor
KO
K08112
glypican 6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dre00535
]
571904 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
571904 (gpc6a)
Proteoglycans [BR:
dre00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
571904 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
Others
571904 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
MRP-S23
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
571904
NCBI-ProteinID:
NP_001103189
ZFIN:
ZDB-GENE-071004-15
Ensembl:
ENSDARG00000103156
UniProt:
A7MBT1
LinkDB
All DBs
Position
1:3510389..3854229
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AA seq
562 aa
AA seq
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MVKTPVVVFTSLSLLLSLSCAGDVKSRSCSDVRLAFTTKGFSLHNVPHQEISGEHLRVCA
QGYTCCTSDMEDQLGQQSKLDFERLVDDSSRNIRTTFTSRHKKFDEFFLELLDNSEKSLN
DMFVRTYGKLYTHNSEMFEDLFSELKRYYTGGNVNLEEVLNDFWSRLLERMFQLLNSQFT
FSDDYLECISKYTDQLKPFGDVPRKLKAQVTKAFIAARSFVQGLMVGREVANRVAKVNIS
PGCSKALTKMWYCPYCGGMSGLKPCANYCQNVMRGCLANQADLDPEWNLFIDAMLLVADR
LEGPFNIEAVMEPIDVKISEAIMTMQDNSMQVSSKVFQGCGHPKAASVGRSARGISDVFN
SRFKPFNSPEERPTTAAGTSLDRLRIVWRTMQHSVVDIKEKLKESRRFWSSLPDSICAED
EMTDPDEEQCWNSHTRGRYFPEVVKDGLTNQLNNPEVEVDITRPDTFIRQQIMTLRVMTN
KLRNAYNGKDVYFQDSSDEESGSGSGSGFTTEPEVVHTEPPMLEADKSDPQPPTDAGSVQ
QKPSVTVLSIPALLLLLLLCWR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagacacctgtcgtggtttttacttctttatcgcttctgctgtcgctgtcatgt
gctggagatgtaaaatcgcgcagctgcagcgatgtgcgcctggcgttcaccaccaaaggc
ttcagtctccataatgtgccacatcaggagatatcaggtgagcatctgcgggtctgtgct
caaggatacacctgctgtacttcagacatagaggatcagctcggacagcagagcaagctg
gacttcgagaggctggtggacgacagcagcaggaacatacgcacaacattcacctccaga
cacaaaaagtttgacgagtttttcctggagttgctggacaactctgagaagtctctaaac
gacatgtttgtgcgcacatatggcaaactctacacacacaactcggagatgttcgaggac
ctgttctcagagctgaagcgctactacaccggtgggaacgtcaacctggaggaggtgctg
aatgacttctggtcgcgtctgctggagagaatgttccagctgctcaactcgcagttcacc
ttcagcgacgactatctggagtgcatcagcaaatacactgaccagctcaagccgttcgga
gacgtgccgcgaaaactcaaggcgcaggtcaccaaagctttcatcgcggccagatccttc
gtccagggacttatggtgggccgagaagtggccaacagggtggccaaggtcaatatttct
ccaggctgcagtaaagcattgactaaaatgtggtactgcccgtattgtggaggaatgtca
ggactcaaaccctgcgccaactactgccagaatgtgatgcgcggctgcctggccaaccaa
gcggatctggaccctgagtggaacctctttattgatgccatgttgctggtggctgacaga
ctggaagggccctttaacattgaggccgtcatggagcccatcgatgtcaagatctctgaa
gccatcatgaccatgcaggacaacagcatgcaggtttcatccaaggtgtttcaaggatgt
ggtcatcccaaagcagccagtgtaggccgatctgcccgcgggatctcggatgtgttcaac
agccgcttcaaacccttcaacagcccagaagaacgacccaccacggcagcgggcaccagc
ctggacagactgaggattgtctggaggacgatgcaacacagcgtggtcgacattaaggag
aagctgaaggagtcaaggaggttctggtcgtctctgcctgacagcatctgtgcggaggac
gagatgactgacccagatgaggagcagtgctggaacagtcataccaggggaagatatttc
ccagaagtggtaaaagacggtcttacaaaccagctgaataacccagaggtggaggtggac
atcacaagaccagacactttcatccgacagcagatcatgaccctcagagtgatgaccaac
aagctgagaaacgcatacaacggcaaagacgtctactttcaagactccagtgatgaggag
agcggttctggcagtggcagtggcttcaccacagaacctgaagtggttcacacagaaccg
ccgatgctggaagccgacaaaagtgacccacagccgccgacagacgctggatctgtgcag
cagaaaccttccgtgactgtactgagcatccctgcactgctgctgctgctgctgctctgc
tggagataa
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integrated database retrieval system
