Danio rerio (zebrafish): 571909
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Entry
571909 CDS
T01004
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
571909 (atl1)
Membrane trafficking [BR:
dre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
571909 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
571909 (atl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
571909
NCBI-ProteinID:
NP_001139172
ZFIN:
ZDB-GENE-030131-8003
Ensembl:
ENSDARG00000060481
UniProt:
B8A6H1
LinkDB
All DBs
Position
13:40230933..40250622
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AA seq
554 aa
AA seq
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MARDKKDRDSWGSFVDKNVYDWSSEEEEADGRARPVQVLVVKDDHTFELDEAALSKILLS
EEVRDREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEKWLGDAEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGSKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFPYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRLREIDQEFINNLQV
LVPCLLRPKNLDVKEINGSKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAGAKDLYNRKMEVVSGGDRPFLAPSELQARHLEIREEALALFRSVKKMGGEEFSRRYLL
QLETEIDELFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDVIASVCNM
VLGFALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQALYKLYSVAANHRQLYNHAFPG
HQSDQQPEQDKKRN
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggacaaaaaggacagagatagctgggggtctttcgtggataagaacgtgtat
gactggagctctgaggaggaggaggccgacggtcgggcgcgtccggtgcaggtgctggtg
gtgaaagatgaccatacgtttgagctggacgaggcagcgctcagtaagatcctgctgtcc
gaggaggtccgagacagagaggtggtggccatttctgtggcaggagccttccggaagggc
aaatccttcctcatggacttcatgctgcgctacatgtacagccaggccagtgaaaagtgg
ttgggggatgctgaagagccgctgacaggattctcatggagaggaggatcagagcgggag
accaccggaatccagatctggagtgaagtcttcctggtggacaaaccagacggtagcaag
gtggcagtgctgctaatggacacacaaggaaccttcgacagccagtccactctccgtgac
tcagctactgtattcgccctcagtaccatgatcagctctatgcaggtgtacaacatatcc
cagaatgttcaggaagacgatcttcagcatttgcagctcttcaccgaatatggcagactg
gctatggaagaaacatttctcaaaccgtttcagtcactgatctttctggtgcgggactgg
agctttccatacgagtttccttatggacaggaaggaggaatgaaatttctggagaaaaga
ttaaaaatctcagagaatcaacacgaggagctgcagaacgtgaggaaacacatccattcg
tgcttcaccaacatctcctgctttctcatgccccatccaggactcaaagtggccacaaac
ccccattttgacggcagattgagggagatcgatcaagagttcatcaataatctgcaagtg
cttgttccgtgtttactacgccccaaaaacctggacgtaaaagagatcaatggaagcaaa
atcacctgccgtggactcgtggagtattttaaggcgtatatcaagatttaccagggagag
gagctgccacatccaaaatccatgttacaggccacagcagaggccaataatctggcagca
gtggctggagctaaagatctgtacaacaggaagatggaggtggtgagtggaggagatcgt
cctttcctcgccccgagtgaacttcaggcacgtcacctggagatccgcgaggaggcgtta
gcattattccgcagtgtgaagaagatgggtggcgaggagttcagccggcgttacctgctg
cagctggagaccgagatcgatgagctgttcgttcagtacatcaaacacaacgactccaag
aacatctttcacgcggctcggacacccgccacgctctttgtggtgatcttcgtgatgtac
gtggccgcaggaatcacaggcttcgtgggagtggatgtcatcgccagcgtctgcaacatg
gtgctggggtttgcgctcatcactctgtgcacctgggcttatattcgctactcaggagaa
tacagagaactgggcgcggtcatcgaccaggtggcaggagctctgtgggatcaggctctg
tataagctgtacagcgtagcggcaaaccacaggcagctgtataatcatgccttccctgga
caccagagcgaccaacagcccgagcaggacaagaaacgaaactga
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