Danio rerio (zebrafish): 571925
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Entry
571925 CDS
T01004
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X7
KO
K08518
syntaxin-binding protein 5
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
571925 (stxbp5b)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
571925 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
571925 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
CFAP43_N
WD40_like
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
571925
NCBI-ProteinID:
XP_005158661
ZFIN:
ZDB-GENE-090821-5
Ensembl:
ENSDARG00000029234
UniProt:
A0A8M2B5G8
LinkDB
All DBs
Position
17:complement(7232297..7351434)
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AA seq
1108 aa
AA seq
DB search
MHISAFVSHSLENNMKKFNIRKVLDGLTAASSSSSSAAAASPQSGNDMIQETLQSEHFQL
CKTVRHGFPYQPSSMAFDPVQKILAIGTQSGALRLFGRAGVECYCQHESGSAVIQLEFLV
NVGALVSALADDSIHLWNLRQKLPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNIHI
VNVESFTLSGYVIMWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSK
KADYRYNYDEAIHSVAWHHEGKQFVCSHSDGTLTTWNVRAPAKPAQIITPHGKQPKDGKK
PEPCKPILKVEYKTTRAGDPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFL
TLCETPYPNDFQEPYAVVVLLEKDLVVIDLAQIGYPIFENPYPLSIHESPVTCCEYFADC
PAEAIPALYSVGSRQKRQGFSKKEWPISAGNWGQGTLSFSEIIITGHADGSIKFWDASAL
MLQVLYKLKTAKVFDKPRSKEEKSSTDIVDEDPFAIQMLSWCPESRVLCVAGVSAHVIVY
RFSKQEVTTEVVQLLEVRMQCELNEVESPEGGGDQASAVSTPGTAPSPQTSLPQSHPSTS
SNNSCDGLRDNVPCLKVRSSPLKQFPGYHVELLIQLVWVSGEPPQQITSLAINSAYGLVA
FGNGNGLAVVDYIQKTLLLNVTTAELYGSTDPHHRQPRSPRKTRQPSAGLCDGNDASAAP
EERCKSPTSDARDNSFSRSRSSSVTSIDRESREVISSFYFCDSLSKKSETLAVPSLWVGT
SLGSMLAIALTVPSTPEQRMQQPVGVSFCGSVVRLKGAILRMAQLDASGTVLPHIYEPWY
EPNAPEEERERPRRRRPTSPPSSQENQDCQYAVVCSEKQAKVVALPSQHCIFEHNITEAS
FVLRADVVTMTAGVAIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQ
ALYLTSPTEIQRITYSQETCENLQEMLGEMFTLVETPEAPNRGFFKGLFGGGAQSLDRED
LFGEVAAGKASRSLAQHIPGPGGMEGMKGAASGVVGELARARIALDERGQKLGELEERTA
AMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctctgcgttcgtttcgcattcgctggaaaacaacatgaagaagtttaatatc
aggaaggtgttggacggattgaccgcggcgtcttcttcctcctcctctgccgccgccgcg
tcccctcagtcggggaatgacatgattcaggagaccctgcagtccgagcatttccagctc
tgcaagacagtgcggcatggctttccctatcaaccctcctccatggctttcgaccctgtg
cagaaaatcctggctattggcacacagagtggagccctgagactatttggccgagcagga
gttgagtgttactgtcagcatgagagcggatccgctgtcatccagctggagtttcttgtc
aatgtaggggcgctggttagtgctctggcagatgacagtattcatttgtggaatttgagg
caaaagcttccagccgttctccattctcttaaatttaatcgggagaggatcacgttttgc
catttgcctttccagagtaaatggctgtatgtgggcacggaaagagggaacattcatatc
gtcaacgtggagtccttcaccctctcaggctatgtgatcatgtggaacaaagccattgaa
ctttcatcaaagactcaccctggaccagtagttcacatcagcgataaccccatggatgaa
ggaaaacttttaattggttttgaatgtgggatagttgtgctgtgggacttgaaatcgaag
aaggcagactaccgctacaactatgatgaggcgatccactctgtggcttggcatcacgag
gggaaacagtttgtgtgcagtcactcggatggcacacttaccacatggaatgtgcgcgct
cctgccaagcctgcccagatcattacaccgcatggtaaacagccaaaggatgggaagaag
ccggagccttgcaaacccatcttaaaagtggagtacaaaaccaccagagcaggggaccca
ttcatgatactgtgtggaggtttgtcatatgatacagtgggtaggcgagcctgtctgact
gtgatgcatgggaaaagcactgcagtgctggagatggactaccccatagtggatttcctt
acgctgtgtgaaaccccatatccaaacgatttccaggagccttatgcagttgttgtccta
ctggagaaggatttggttgttattgaccttgcacaaattgggtatcccatctttgagaac
ccgtaccctctatccatccacgagtctccggtgacctgctgcgaatattttgcagactgt
ccagccgaagcaatccctgcactttactctgttggctccagacagaaaagacagggcttc
agtaagaaggaatggcccataagtgcaggtaactggggccagggaacactgagtttctca
gagattatcatcactgggcatgctgatggatcgatcaagttttgggatgcctcagcttta
atgcttcaagtgttgtataagctgaaaacagcgaaggtgtttgacaagccccggagtaaa
gaggagaaatccagcactgatattgtggatgaggatccattcgccatccagatgctgtcc
tggtgtccggagagccgtgtgctgtgtgtggctggagtatcggctcatgttatagtctac
aggttcagcaaacaggaagtcaccaccgaagtggttcagctgttggaggtgcgtatgcag
tgtgagctgaatgaagtggaatctccagagggtggaggagaccaggcgtcggctgtttcc
accccaggaactgcacccagccctcagaccagcctgcctcagtctcacccctccacaagc
agcaacaactcctgcgacggccttcgggataacgtgccctgcctcaaggtcaggagttcc
cctctcaaacagtttcccggttatcatgtggagctgctcattcagctggtgtgggtcagc
ggggagccaccacagcagatcaccagcctggccatcaactctgcgtatggcctagtcgct
tttggcaatggaaacggccttgcagttgttgattacattcagaaaactctccttctgaac
gtgaccaccgccgaactgtacggctctacagatcctcaccacagacaaccacgctcaccc
cgcaaaaccagacagccctcagcaggtctttgtgatggtaatgatgcatcagctgcccca
gaagaaagatgcaaatcaccaacctcagatgccagagacaactcattcagccgctcgcgc
agctccagtgtgaccagcattgacagagagtcacgggaggtcatttcctccttttacttt
tgcgactctctgtccaagaagagcgagacgctggcagtacccagtctgtgggtgggcacc
tcactgggcagcatgttggccatcgccctcaccgttccctccacaccagagcagaggatg
caacagcctgtgggcgtttctttctgtggttcagttgtgcgcttgaagggagctattctg
cgtatggcccagctggatgccagcgggactgtccttcctcatatttatgagccctggtat
gagcccaacgcccctgaagaggagagagagcggccacggagacgcagacccacgtcccct
ccgtcatctcaggagaaccaggactgtcagtacgccgtggtctgctctgagaaacaggcc
aaggtggtggcgctgccctcccaacactgcatctttgaacacaacatcactgaagcatcc
tttgtgcttagagccgatgtggttacgatgacggccggggttgccatcgcctgtttctgt
gccaacggccacatcatgaccctcagtttgcccagcctgcggccattgctggatgtgaac
taccttcctctgacggacatgaggatagccagaaccttctgtttctcaaaccaaggccaa
gccctgtacctcacatcgcccactgagatccaaagaatcacctatagccaggaaacctgt
gaaaacctgcaggagatgcttggagagatgtttactctagtggagacaccagaagctcca
aacagaggcttcttcaagggcttgtttggaggcggcgctcagtccttggacagagaggat
ctgtttggagaggtggctgctgggaaggcctcacgcagcctagcccagcacatcccgggt
cctggtggtatggagggaatgaagggggcggcgtcaggtgtggtgggagagctggcgcgg
gcgaggatagcgctggatgagagaggacagaaactgggagagctggaggagaggacggca
gccatgatggccagcgcagactccttctccaaacatgcgcatgatatgatgctgaaatac
aaggacaagaaatggtaccagctctga
DBGET
integrated database retrieval system
