Danio rerio (zebrafish): 572249
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Entry
572249 CDS
T01004
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
572249 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
572249 (cnga1b)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
572249 (cnga1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
MDM10
Sec62
DUF3043
Piezo_TM1-24
PFF1_TM
Zip
NPR3
Neur_chan_memb
SLC52_ribofla_tr
RR_TM4-6
Menin
Motif
Other DBs
NCBI-GeneID:
572249
NCBI-ProteinID:
XP_701036
ZFIN:
ZDB-GENE-110408-39
Ensembl:
ENSDARG00000012125
UniProt:
E7FE78
LinkDB
All DBs
Position
23:47602901..47622458
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AA seq
639 aa
AA seq
DB search
MSARVRPLDPPRFLVEGVEQVTMEDVIENKRPDAGALFNNTNNSNNNEEEDKKKKKKEKK
EKKEKKEKKEKKEKKEKKKEQEEKEKEKEKEKEKEKEKEKEKEKKEPPKEIEVVDPAGNM
YYNWLFVITCPVMYNWIFIIARACFEELQGDYLILWFFLDYLSDAVYLLDMVFRTRTGYL
EQGLLVKDQKKLRDRYTDSLQFRLDLASMVPTDVFYLYFGMNYPEIRMNKLLRINRLFEF
FQRTETRTNFPNVFRISNLVMYIVIIIHWNACMYYSFSKAIGFGSDAFVYPDPSDPEFGR
LVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVGNVGSMITNAN
AARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAE
IAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL
AVVADDGITQFVVLSDGSYFGEISILNIKGSRAGNRRTANIRSIGYSDLFCLSKDDLMEA
LTEYPDAKAMLEEKGRQILMKDNLLDLELAKQGPDPKDMEEKVQKIGGVLEDLQTRFARL
LAEQEAAQGKLKKRVTKLEKKMTSETLMEPPPETADKTD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacgagtgaggcctttggacccgcccagatttctggtggagggggtggagcag
gttaccatggaggacgttatagaaaataagcgtcctgatgctggagctctcttcaacaac
accaacaacagcaataacaatgaagaggaggacaaaaagaagaaaaagaaagaaaaaaag
gagaagaaggagaaaaaggagaagaaagaaaagaaggagaagaaggaaaagaagaaagaa
caagaagagaaagagaaggagaaagaaaaagagaaggagaaagaaaaggagaaggaaaaa
gagaaagagaagaaagaaccgccgaaggagatcgaggtggtggatccggctggaaacatg
tactacaactggctgttcgtgatcacgtgtcctgtgatgtacaactggatattcatcata
gcaagagcttgtttcgaggaactgcagggggattatcttatcctttggttctttctggat
tacttatcggatgcggtgtacctgctggacatggtgttcaggaccaggacaggatatctg
gagcagggtcttctagtgaaagatcagaaaaagcttcgcgatcgctacacagacagcttg
cagtttagactggatctagcctcaatggttcccaccgatgttttctacctgtacttcggc
atgaactacccagagattcgcatgaacaagctcctgaggatcaatcgactgtttgagttt
ttccagcgcaccgaaacgcggactaactttcccaacgtcttccgaatctccaacctcgtc
atgtacatcgtgatcatcatccactggaacgcctgcatgtattactctttctccaaagcc
atcggtttcggatcagacgctttcgtgtacccggacccttcagatcctgagtttggccga
ttggtacgtaaatatgcctacagcatgtactggtccaccctgacgctcactaccatcggc
gaaacaccgccgcccgtcgaaaactctgagtacttcttcgtagtcaccgactttctagta
ggcgtgttgattttcgcaacaatcgtcggtaacgtcggctcaatgatcacaaatgccaac
gcagcacgagccgatttccaagctcgcatcgatgctattaaacagtacatgagctttcgg
aaagtcaccaaggatttggagaaacgggttattaaatggtttgattatttgtggaccaat
aaaaaggcggtcgatgagagagaagtactgaagtatcttcccgacaagctgagggcggag
atagccataaacgtccatctggatacgctaaaaaaagtgcgtatctttgcggactgtgaa
gccgggcttttggtggagctggtgttaaagctgcagccgcaggtttacagccctggagac
tatatatgcaaaaagggcgacatcgggcgcgagatgtacatcattaaagagggtaaactg
gctgtggtggcggatgacgggattacgcagttcgtggtgctcagtgatgggagttatttc
ggagagatcagcattctcaatattaagggcagcagggcggggaatcgcagaaccgccaac
atacgcagtattggatattcggatctgttctgtctttccaaagacgacctaatggaggcg
ctgactgaatatccggatgccaaggccatgctggaggagaaggggcgacagatccttatg
aaggataatctcctggatttggagttggccaagcagggtcccgatcccaaagacatggag
gagaaggtgcagaagatcggcggtgtgctggaggacctgcagacacgcttcgcccgtctt
ttagctgaacaagaagctgctcagggaaaactgaagaagcgcgtcactaagctggagaag
aagatgaccagcgaaactctgatggagccaccgccggaaactgcagacaagactgactag
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