Danio rerio (zebrafish): 572332
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Entry
572332 CDS
T01004
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
572332 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
572332 (rnf43)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
572332 (rnf43)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
572332 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
ECSCR
FANCL_C
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
572332
NCBI-ProteinID:
XP_021332049
ZFIN:
ZDB-GENE-161021-2
UniProt:
A0A8M9Q3W1
LinkDB
All DBs
Position
5:complement(3392396..3634280)
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AA seq
831 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAALQVALGHTGLELAAAVESERSAPRATITVKLLKQESTGRPI
TLEGLFVRGSEGKAQGKLMQSHPLSLCNTSEDERQESIFISIVKLESPESKVPQCQPLLD
KARLALQRGAQAVIFDISDDPSAAQELRDGSSLADPVVLVTSSDADELMGLVNKNEEAMV
YIDIMIDSPTWPHYDVGILLTVVLVVLAIIVIFALRFRCRSNRTWDSVHQQTMRAISRLE
TRTYSSGSQRSRIAPGSNSSSSSSPICAICLEEFMDGQDLRIISCAHEFHKECVDPWLLQ
HRTCPLCMHNIMGKLPQGSDLASRQPQRSRLPPPPPEHSQAFLLPHHYSNQHPYPQHHVP
FSLRHHHPRTPGPLPQIGHYGNSPPVHPSTLHCFPSRPLGASCAYHPDSHHGRTQKTSTH
NCRSVGHHYATPRRSCLRCPGAAIRSASGSRVHHITSSANHITHHHHLLPRAGASHSRND
DGSCSGGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSL
SSDYDPFVYYGPGTAARRGSMEATQRPRSLDSVVNRAGDPSAGCSEEQQQVAVFSHVHYH
RHRHHYYEDGELNQVPGRVSDEDQNATSSNTATGGPCNSNKDKDSTAVCQVQHQSCHCPK
TDLKTVEESNPDPISASVAPSLTSPSPPCCHKSPGWTPRRKTTGCPSPVVHFHQNLDLQD
DCSIHIHYGQGAGSYCCTPPPDIAPKLVPVPLILDSTGIPEWPCCGGTHVVWQKQVQQAH
SEPQLLGPTSGVDNRPLCRAHYSPGDELPEDVCLYCQTLHNSQGSEEESGV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgtttggccgggctctggccgtggctgctcatggctgccttg
caggtggcgctgggccacacgggcctggaactggccgctgccgtggagtccgaacggtcc
gctccccgagccactatcacggtgaagctgctgaagcaggagtccaccggcaggcccatc
actctcgaagggctgttcgtccgcggcagcgagggtaaagctcaggggaaactcatgcag
tctcacccgctgtctctgtgtaacaccagtgaagatgagcgtcaggagagcatcttcatc
agcatcgtcaagctggagagtccagagagcaaagtgccgcagtgccaaccgctgctggat
aaagctcgtctggctcttcagagaggagctcaagccgtcatcttcgacatctctgatgat
ccttccgctgctcaggagttgcgtgacggaagctcattggctgatccagtggtactggtg
acatcatcagacgcagatgagctaatgggactcgtcaacaagaatgaagaagcaatggtc
tacatcgatattatgattgattctccaacctggcctcactatgatgttggcatcctgttg
accgtggttctggttgtgttggccatcatcgtgatttttgctctgcgtttccgctgccgc
tccaacagaacctgggactccgtgcaccagcagaccatgcgtgccatcagccgtttggag
acgcgcacgtacagctctggttctcagcgttcccgaatcgctccgggctccaacagcagc
tccagctccagcccaatctgtgccatctgcctggaggaattcatggatggacaggacttg
agaatcatctcctgtgctcatgagtttcataaggagtgtgtggatccctggctcctccag
caccgaacctgcccactgtgcatgcacaacatcatgggtaaactgcctcagggttcagac
ctggcatcccgtcagccccaaaggagtcgactgccaccccctccacccgaacacagtcag
gccttcctccttccccatcactactcaaaccagcacccgtacccccaacaccacgtccct
ttttccctgcggcatcatcatccccgcacccctggaccattacctcaaataggtcactat
ggcaactctccccccgttcatccaagcactctccattgctttcctagcagacctttggga
gcaagttgtgcgtaccatccagattcccatcatggacgtacgcaaaaaacaagtacgcac
aattgtcggtccgtagggcatcactatgcaactcctaggcgatcatgtctacgttgtccc
ggagcagccatacggagcgcttcaggttctcgagtgcatcatattacatcatccgcaaac
catataactcatcatcatcatcttcttcctcgtgctggagcttcacacagtcgaaacgac
gatggcagctgctcgggagggagttatcatacggagcgtagcggttatcttgctgacggg
cccgctagtgactccagctccggatcttgccacggttcttccagcgactccgtgttgaac
tgtactgatgtcagtctgcagggggtctatggcagctggtctacttttcgtagctcactc
agtagtgactatgacccatttgtgtactacggaccaggaacagcagctcgtagagggagc
atggaggccacgcagagacctcgatccctggactctgtggtaaaccgcgctggagatccc
agtgctggctgttcagaagagcagcagcaggtggctgtattcagtcacgttcactatcac
aggcataggcaccactattacgaggacggggaactcaatcaagtgcccggacgagtttct
gatgaggatcaaaatgccacgtcctcaaacacagcaactggcggcccctgcaactcaaat
aaagacaaagactccactgcggtttgtcaggttcagcaccagtcctgccactgccccaaa
acagacctcaaaacggttgaggaaagtaacccggaccctatttctgcatctgtggctcct
tctttaacctctccgtccccaccctgttgccacaaatcccccggatggacccctagacgg
aaaacaaccgggtgtccatcaccggttgttcatttccatcaaaacttggaccttcaggat
gattgtagcattcatatccactatggacaaggagcagggagctattgctgtacaccacca
ccggatatagccccaaaattggtgcctgtaccactgattttggactcgacgggtattccc
gagtggccttgctgtggtgggacacatgttgtatggcaaaagcaggtacaacaggcacat
tcggagcctcagcttttagggcccacttctggagtggataatagacccctatgtagggct
cattacagcccgggggacgaacttccagaggacgtttgcctgtactgccaaactctacac
aacagtcaggggtcagaggaagaatctggtgtttga
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