Danio rerio (zebrafish): 572355
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Entry
572355 CDS
T01004
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X17
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
572355 (chd9)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
572355 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
572355
NCBI-ProteinID:
XP_001922536
ZFIN:
ZDB-GENE-030131-497
Ensembl:
ENSDARG00000074498
UniProt:
A0A8M1QR39
A0A8M9QHX9
LinkDB
All DBs
Position
7:36582049..36699089
Genome browser
AA seq
2404 aa
AA seq
DB search
MSEKRLQKQKQQQQQQQQQQQQQQMESPLSDDKQQKANRIISEAIAKARERGEKNIPRVM
SPDSFPSSSSQHRSHKAGSSKSKSKDKSSKKARIVKSSKPKQKAQIGKIVIKFGKKKRKK
TDSSEELSDDDRPTRRSSKDDDSKRRSNRKVKRKKYEDDGEARISDEEMKVIVKAKKSSS
NKKPAVQLFVENPTEEDAAVVDKIMASRVVKKEVSPGVLVEIEEYFVKYKNYSYLHCEWA
TEQQLEKDKRIQQKIKRFKIKQAQKAHFFADIEEDPFNPDYVEVDRVLEVSYCEDKDSGE
PVVYYLVKWCSLPYEDSTWELMEDVDQTKIEEFKKLQAAKPHTNRMERPPASHWKKLEKS
RKYCNENSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRTGIKGPF
LIIAPLSTIANWEREFRTWTHLNVIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYRFQA
VITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQN
TVEELFSLLHFLEPTRFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLA
PKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIK
GAEEKIMEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCL
DILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVL
QSMSGRDNSLAGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGNKFCEEDIDQILQRRT
KTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVIDT
PRVRKQTRPFSSTKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVYGW
GRWKDILAHGRFKRQLSERDVEWICRALLSYCLVHYRGDDKIKSFMWDLIAPTEDGRTKE
LQNHLGLSTPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHILSDDGYKKHLKHHCNKV
LLRVRMLYYLKQELIGAQCQQVLEGIDASEIEIRVPELDRSEMPAMWWDMLSDKCLLLGV
YKHGYEKYNTIRADPKLCFLDRVGRPDEKAIAAEQRGNDFIDGDVDDPEYKPAPALMKDD
MEDDASSPGDLVITDAGEGGSMLDGGGGTLSSGSGVYWPSPSALTARLRRLITASQRFTK
SRQILQIHQTQQAMTPALYPMPPTLTDTFNPKIAAKIERQQRWTRREEADFYRVVSTFGV
VFDPDLGRFDWTKFRAMARLHKKTDESLHKYLCAFIAMCRRVCRLPAIEGDMVDSSLAIQ
PITEERASRTLYRVELLRKIREQVLRHPQLYEHLALCQPGPDLPVWWETGSHDRDLLLGA
AKHGVSRTDYHILRDPELCFMAAQRNYSQNKGSTAQAQAPNQTLSLGQCHTPTPLPTPLQ
HIQMKEASASPLLNQTELKEEPLSEGEEEAGERELKMETASVRPPTPSGVDEKDDILKVG
ESESRMEAARTKPLTPNSITRKQKKLSKRSRREARRESRSDSDSDGSSSSSSSSSSSRSS
SSSSSSSRSGSSSSSSSSSCSSGSSSSSSSSSSSSEGSDSEEAPKNASVVPGVKGFDEDS
VASLNTTQDDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLKGKW
PGVRRAYEGNAVASFYTTKLLDNASTLPEDPSDSPQGSKVKKHVADREKEFSVKINNEGS
LKLTFQKQGLPLKRPLEGEEGPLAQQQYLARLQELQNASDISLADYTKTQNYPQVLPEQM
RLNGVMDGQPIVKRRRGRRKNVEGMDLLFMNRNRPPVMPEQTPAGWSGGVAGMSGPSGLS
TPQGPSTFDTESRVPVISLKDGTRLAGEDAPKRKELDQWLKEHPGFVADVGAFIPTANKL
QFQDGRPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLSRFLQEN
PEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNAMPKAAMVTGASAN
AALGLNPLLTNGLLAGLDLNSLQALQHNLQSLQSLQLTTGLMGLPHDPSNMAAMFPMMLS
GMTGLPNLLGMSSLIGNPSQEVAGVAPVGDEEEKKKSAGDIPKSSALNLSLDGKAERTEA
QSSKATTSNQTSASASGHPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQAANTQPTPAL
QPAASEAMAPQPGQSEDKDSDEGEEPDEKKDTSGPEGSAKADSSSSESDSSSSSSEDSDS
SDED
NT seq
7215 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaagcggctgcagaagcaaaagcagcagcagcagcagcagcagcagcagcag
caacaacagcagatggagtcgcccctttcggatgataaacaacagaaggccaatcgaatc
atctctgaggccatcgccaaagcacgagagaggggagagaaaaatatccctcgcgtcatg
agtcctgacagcttcccatcttcgtcgtcgcagcaccgcagtcacaaggctggttcctcc
aagtccaaaagcaaggataagagttccaagaaggcccgcatcgtgaagtcatccaagccc
aaacaaaaggctcaaattggaaaaattgttataaagtttggaaagaagaagcggaagaag
acagattcctcagaagagctgtctgatgatgacagacccactcgaagatcctctaaagac
gatgattcgaagcggcgttctaacaggaaggtcaagaggaagaagtatgaggatgacggt
gaggcccgaatatctgatgaggaaatgaaggtcatcgtcaaagccaaaaagagcagctcc
aataaaaagcctgcagtgcaattgtttgtggagaatccaaccgaggaagatgctgctgtg
gttgataaaatcatggcgtctcgtgtggtgaaaaaagaggtttctcctggggtattggta
gaaattgaagagtattttgtgaaatacaaaaactactcatatcttcactgtgagtgggca
acggagcagcagttagaaaaagacaagaggatccagcagaaaatcaagcgcttcaagata
aaacaggcccaaaaagcacacttctttgctgatattgaggaggacccattcaatcctgac
tatgtagaagtggaccgagttcttgaggtgtcctactgtgaagacaaggacagtggagag
ccggtggtgtattacctggtgaaatggtgctcattgccatacgaggacagcacatgggag
ctgatggaagatgtagaccagactaagattgaggagttcaaaaagctgcaggcagcaaaa
ccacacacaaacagaatggagcgtcctccagcaagtcactggaagaagctggagaaatcg
cgaaagtattgtaacgaaaacagtctcagggattaccagctggagggggtcaactggctg
ctcttcaactggtacaacaggcgtaactgtattctggcggatgagatgggtctgggaaaa
accatccagtccattacttttctggaagagatctatcgcacagggatcaaggggccgttc
ctcatcattgcccctctctctactatcgctaactgggagagagagttccgaacctggacg
cacctcaacgtcatcgtgtaccatggcagtgtggtcagcagacagatgctccaacagtat
gagatgtactgcagagactctcagggtcgtgtgataagaggtgcttaccgctttcaggca
gtcattacaacatttgagatgattttgggaggctgtccagaacttaacgcaatagactgg
cgctgtgtcatcatcgatgaagcccatcggctcaaaaacaagaactgcaagctactggag
ggcttcaaacttatgagtctggagcataaagtattgttgacgggcactccactacaaaac
acggtagaggagctttttagtcttctgcacttcctggagccgacccgcttcccttctgaa
aacaccttcatgcaagaattcggagacctcaagactgaggagcaggtccagaagctccag
gccattctgaaacccatgatgctgcgccgtcttaaggaggacgtggagaagaagttggcc
cctaaagaagagaccattattgaagtggagctcaccaacattcagaagaaatactaccgc
gccattctggagaagaacttctcattcctggctaaaggggctggtcaggccaacgtccca
aacctgctcaacaccatgatggaactgcggaaatgctgcaaccatccctacctcatcaaa
ggggctgaggagaagattatggaggacttcaaggaggtgtacagccccgcagcagtagat
ttccacctgcaggctatgattcagtcagcaggtaaactcgttctcattgacaagctgctc
cccaagatgaaggctggtggacacaaagtgctcatcttctctcagatggtgcgctgcctg
gacatcctggaagactacctcatccagagaagatacctctatgagcggatagatggccgt
gtacgtggaaacctccgtcaagcagcaatagaccgtttcagtaaaccagactcagatcga
ttcgtcttcctgctgtgcactcgagcaggtggacttggtattaacctcactgcggccgac
acctgtatcatctttgactctgactggaatccacaaaacgacctgcaggctcaggctcgc
tgccaccgcattggtcagaacaaagcagtaaaagtatatcgacttattacacgcaattcc
tatgagcgagagatgtttgatagagccagcctgaagctgggattggataaagcggtgctt
cagagcatgagtggaagggacaacagtctagcaggaggaggacagatgcagcagcagctg
tctaagaaggagattgaggaccttctgcggcgtggagcttatggtgccatcatggacgag
gaagatgagggaaacaaattttgtgaagaggacattgaccaaatcctgcagcgcagaacc
aagaccatcaccattgaatctgagggtcggggctccacctttgccaaggccagctttgta
gcttcagggaacagaacagacatctctctggatgaccctaacttctgggacaagtgggcc
aagaaagctgaaattgacatggatacagtcaatggcagaaacagtctggtgatcgacacc
cctcgggtcaggaaacagacccggccattcagctccaccaaggacgaactggctgagcta
tcagaaggggagagcagtggagatgacaaaccaaaactccgccggccgcatgaccgactc
aacagttatggccgcacggagtgcttcagggtggagaagaatctgctggtgtatggatgg
ggccgctggaaggacatcctggctcacgggcgctttaagcgacagctaagtgagcgtgac
gtggaatggatttgcagggcactcctgtcatactgcctcgttcattacagaggagacgac
aaaatcaagagcttcatgtgggatctgatcgctcccacagaggacggcaggaccaaggaa
cttcagaaccatttgggcttgtcgactccagtaccccgaggcagaaaaggaaagaagatg
aagactcagtcaagctccttcgacatccagaaggcagagtggatccgaaaacacaaccca
gaacacattttgtctgatgacggctacaagaaacacttgaagcaccactgcaacaaggtg
ctgttgagggtcaggatgctgtattatctgaagcaagagctgattggagcacagtgccaa
caagtgttggaagggattgatgccagtgagatagagatccgggttcctgagctggaccgt
tcagagatgcctgcgatgtggtgggacatgctctcggacaaatgtctgctgttaggagtt
tataagcacggttatgagaagtacaacactattcgtgcagatccaaaactgtgtttcctg
gacagggttgggcggccggacgaaaaggccatcgctgcagaacagagaggaaatgacttt
atagatggggatgtggacgaccctgagtataagcctgctcctgctttgatgaaggatgat
atggaggatgatgcctcctctccaggagacctggtcattactgatgcaggagaaggaggg
tctatgctggacggtggtggagggactctgagctctggctcaggggtgtattggccctca
ccctccgcgctcaccgcccgactgcggcgtctgatcactgcatctcaacgcttcaccaag
agcagacagatccttcagatccaccagacgcagcaggccatgaccccggccctctaccct
atgccccccacactcactgacacgttcaatcccaaaatcgctgctaagattgaaagacaa
cagcgatggacacggagggaggaggcagatttctaccgtgtggtttcgactttcggggta
gtgtttgatccagatttgggccgctttgactggaccaagtttcgagctatggctcgactg
cacaagaaaactgatgaaagtctacacaagtacctgtgtgcctttattgccatgtgcaga
agagtctgccgcctgcctgctatagagggagatatggttgactcctctcttgctatacaa
ccaatcacagaggagcgtgcatcacgtaccttatatcgcgtggagctgctgcggaagata
agagagcaggtgctgcgtcacccgcagctttatgagcacctcgcactgtgccagccagga
cccgatcttccagtctggtgggaaacaggatcccacgatcgggatcttctgcttggggcg
gctaaacacggagtgagtcgaactgactaccacatcctccgcgacccggagctctgcttc
atggcagcccagagaaactacagtcagaacaagggatccacagcacaagctcaagccccg
aatcagactctttcgctgggacagtgtcacaccccaacccctcttccgacccccctccag
cacatccagatgaaagaggcttctgcttcacccctcttgaaccaaaccgagctgaaggag
gagccgctgtcagagggagaggaagaagctggagagcgagagttgaagatggaaactgct
tctgtcagacctcccacaccttcaggagtggatgagaaagatgacatcctcaaagtggga
gagagtgagagcaggatggaggcggccaggacaaaaccactcacacccaactcaataact
cgcaaacagaagaagctgagcaagcggagccgcagggaggccaggagagagtccagatca
gactcagactcagacggctcctcgtccagctcttcatccagctcttcttcaagatcttct
tcctcatcctcgtcttcatcaaggtcaggatccagttcttcatcctcgtcttcctcctgt
tcctcaggctcctcgtcgtcttcgtcatcatcatcctcgtcttcagaaggcagtgacagt
gaggaggcaccaaaaaacgcatcagttgttcctggtgttaaaggctttgacgaagacagc
gttgcatcactcaacactacacaagatgacatgcaggacagtcatgtgaccaacggtatc
tctaatcctccccaccctttccagggaggctacatgctcgctgcctcctactggccaaag
gaccgtgtcatgataaaccggctggacagtatatgtcaggcagtattaaaggggaaatgg
ccgggggttcgtcgtgcatatgaaggcaatgcagtagcatctttctacaccaccaagctc
ctggacaatgcaagcacgctccccgaagacccctcagactcccctcagggttcaaaggtg
aagaagcatgttgcagacagagaaaaggagttctcagtcaaaatcaataacgagggcagc
cttaaactgaccttccagaagcagggtttacccctgaagcgccccctggagggagaagaa
ggacctcttgcccaacagcagtacttagcccgactacaagagttgcagaatgcgtctgat
atcagccttgcggactacaccaaaacacagaactatccacaagtactgccagagcagatg
cgattgaacggagtaatggatgggcagcccatagtgaaaagacggagaggacggaggaag
aatgtggaagggatggacctgctgttcatgaacagaaacaggccacctgtgatgccagag
cagactcctgctggctggagtggtggtgtcgcaggtatgtctggtccatctgggctgagc
acacctcaggggcctagtacctttgatacagagagccgtgttcctgtcatcagcctcaaa
gatgggacacgactagctggagaggatgctccaaagcggaaagaacttgaccagtggcta
aaggaacacccgggcttcgtggcagatgtaggagcctttattcctactgcaaacaagctg
caatttcaagatggcagaccaaaacagaagagacatcgctgtagaaaccctaataaaatc
gacatcaacagcctgacaggagaagagagagtgcagatcatcaacaggcgaaatgctcgc
aagattggtggtgcttttgcacctcctctaaaagatttaagccggttcctgcaagagaac
ccagagtatggggttccacccgagtgggccgatgttgtcaaacagtctggataccttcct
gaaagcatgtttgatcgcatcctgactggacccatcgttcctgaagaggtgagccgacga
ggtcggcgacccaaaaacgcaatgcctaaagcagctatggtaaccggtgccagtgccaat
gctgccctgggcctcaacccactcctaaccaatggcctgctcgctgggctagaccttaat
agtctccaagctcttcagcacaacctccagagcctccagtctctccaactcaccactggc
ctcatgggactgcctcatgacccctccaacatggccgccatgtttccaatgatgctgtca
ggaatgaccggcctgccgaacctcctcgggatgagcagtctcatcggaaatccctcacaa
gaagtggcaggtgtcgctccagtgggcgacgaagaagagaaaaagaagagtgctggagac
attcccaaatcatcagctctgaatttgagtttagatggcaaagccgaaaggacagaggct
caaagctccaaggccaccacctcaaatcaaacaagtgcttctgcttcaggccacccactg
gccctcaacccccttctcctctctagtatgctctacccagggatgcttcttactccaggc
cttaacctgcctgtggccaatcagccgcaagctgcaaacactcagccaaccccagcgctg
caacctgctgcctctgaagccatggccccacagcctggccaatcagaggacaaagacagc
gatgagggggaggagcccgacgaaaagaaggatactagcggtccagagggctcggccaag
gcggactcgtcctcctccgagtccgacagctcctcctcgtcatccgaggattccgattcc
agcgacgaagactga
DBGET
integrated database retrieval system
