Danio rerio (zebrafish): 572407
Help
Entry
572407 CDS
T01004
Symbol
shank2a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
dre
Danio rerio (zebrafish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
SAM_1
SAM_2
Ank_3
Ank_5
PDZ_6
PDZ
FERM_f0
Motif
Other DBs
NCBI-GeneID:
572407
NCBI-ProteinID:
XP_068071078
ZFIN:
ZDB-GENE-120215-55
UniProt:
A0AB32T5B9
LinkDB
All DBs
Position
18:53901296..53971342
Genome browser
AA seq
1693 aa
AA seq
DB search
MCVYVYVCVCVCVCVCVCVCVCVCVCVCVCVCVCVSVCVCVCVCCSGAAEVLTMPRSPTS
SEDEMAQSFSDSSQDSSSESSREEAVYERVRAERPVSRMMDIQSNTLMVQVFIPDLQQTK
CLRFDPCASVWAAKQRILCTLSQNLKDVLNFGLFQPSSSGDGGFLEEESLMGDLPVPAGE
SLPMLEFRYKTRLYSQSSVDEKQIARLHTKANLRRFMDCILHRQLEKVSRMLDKGLDPNY
QDSESGEAPLTLAVQMESMVEFIKALRNGGAHLDFRAKDGMTALHKAACAKNQDALKTLL
DLGASPNSKDSRGLTALYHTVTAGGETHCCELLLDANTALCCQDENGWQETHQACRHGYV
EHLEHLLCYGADMSAQNASGNTPLHICALYNQEKCAHVLLLRGADKDMKNYSSQSPFQVA
LISGNFELAELIKNHRDPEPVGLSDTPSASRGRRPLPRSGVCMSRSLLRSSSDINVPERT
VSPELQQMQRDAGARMRMMMMTSGRSGRMKSNSRSLSVSLEDEHSSSTTLKCPNGRVCVP
SSRRKLYSATSGRHVLLVRSCLPHAGGGENSSLHRNGRVRDSRAERSDRKKLFRHFTVGS
YDSMDNSSDCTTEQKTVVLQKQDSEGFGFVLRGAKADTPIEEFIPTAAFPALQYLESVDE
GGVAWLMGLRTGDFLTEVNHQSVVKMGHRQVVSMIKHGGNRLVIKVVRVSRNPDDKDDKT
RKKAPPPPKRAPTTALTMRSKSMTCELEDPDKVEEAVPPQKIMHEKSSADKTVSIRSRPS
SRFLASMDFNSASERPGVAVVPPNVPGRSHGGYIRLPKSSMRRQKSVGIAGEEKKFLIPP
LLKFSRSLSMPDTSEDIPPPPGISPPSPPYKLSTSTAQGYEPNQSIYTQNSAARCHTIER
DQVGYHRQNFEPYDCQTHPGLNRAHVPENPYSDKPLYVPPKPARRKGILVKQPNVEDSPE
KTCSISIPTIIVKEPSTSSSGKSSRGSSMEIETTGPEPPGQLRPDGSVSNPFAAAIAGAV
RDREKRLEARKNSPAFLSMDLGDEDPFIPTPRLRQSMSIDEGMFANDKSLENIMAPPASL
IGSSQLRNEGNLTDFTIPEPMTKPLTTRSRKCPDIGSPIGIDDDFQQQVSRKTHDICSPP
APGQSSGNKALKEPVLPPLPPPKGEPHKANLNQPLFIDTKLRSNIETNFAATTAVGQPKD
SGGLFRHSRESSRQTVKVSNPSEQLKNAHNTSQQKSAGLLMVQSLNKAKPQGNSLSDGFL
LEESPVMDGEPSDSKLPNSQTTPMEEPGKFSSGIPLPLLTSVDIDEEFDVAEPLPPPLEF
ANSLDIPEDQVAVILKQKKNNETRAVHHSRASNCMTSHAYPPPPPEMFEPVTDSGIEEAD
SRNSAGDPHFEANSTISTVSSISTLSSEGIEDACITYANGQIFLLDRPPVPPKPKSKPII
NKSNAFYRDPLKQESIESIGEPPPLPPPPLCGVAQTEARKTLAKHPQELPNPLLPNADPK
ANVINELSSKLQHMNKDRFPKQGGSLDPPAVSRSIGSREWMAQDTKRIHKVSSSPLPPQA
SPPAGSGHSSLPGSAASPTLTDVFSLPSPPMGNAEQCFSISSVSSQSLSPLTLFQAAADK
PFADKPIPLWSKHDVADWLDTLNLAEHKKAFLENDIEGSHLPNLQKEDLVDLGVTRVGHR
MNIEKALKLLMDR
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatgtgtatgtatgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgt
gtgtgtgtgtgttgttcaggagctgctgaagtgttgactatgccccgcagccccacatcc
agtgaggatgagatggcacagagtttctcagattcctctcaggactcgagctctgaaagc
tccagggaagaggctgtgtatgagagagtacgagcagaacggcccgtcagccgcatgatg
gacatccagagcaacacactgatggtccaagtgttcatcccagacctgcagcagaccaag
tgtctgcgcttcgacccctgcgcctcagtctgggctgcgaaacagaggatcttgtgcacg
ctcagccagaacctgaaggatgtgctgaacttcggcctcttccagccgtccagcagtggt
gatggaggattcctggaggaggagagtctgatgggagatcttccagtgcctgctggagag
agtctacccatgctggagtttcgctataaaacgaggctgtacagtcagtccagtgtggac
gagaagcagatcgccaggctgcacactaaggccaacctgaggaggttcatggactgcatc
ctgcatcgtcagctggagaaagtgtccagaatgctggataaaggactggaccccaattac
caggactctgagagcggagaggctccgctgacgttggcggtgcagatggagagtatggtg
gagtttattaaagcgctgaggaacggaggagctcatctggacttcagggctaaagacggc
atgacggctctgcataaagcagcctgcgctaaaaaccaggacgcgctcaagacgctgctg
gatctcggagcgtctccaaactctaaggacagtcgtggtctgacggctctgtaccacaca
gtgacggccggtggagagacacactgctgtgagctgctgctggacgccaacactgctctc
tgctgccaggacgagaacggctggcaggagacacaccaggcgtgtcgtcatggttacgtc
gagcacctggagcatctgctgtgttacggagcagacatgagcgcgcagaacgcttcagga
aacacacctctgcacatctgcgcactctacaaccaggagaagtgtgctcatgtgctgctg
ctcagaggagctgataaagacatgaagaactacagcagccagagcccctttcaggttgct
ttaatctctgggaatttcgagttggcggagctcatcaagaaccacagagaccctgaacca
gtgggtctctcagacaccccgtcagcctcccgtggtcgccggcccctgccccgcagcggt
gtgtgtatgtcccggtctctactgcgctccagcagtgacatcaatgtcccggagcgcacc
gtgagcccagagctgcagcagatgcagagagacgcgggcgcacgcatgcgcatgatgatg
atgaccagcggacgcagcggcaggatgaagagcaacagcagatcactgtccgtcagcctg
gaggacgagcacagcagcagcaccacgctcaaatgtcctaacgggcgtgtgtgtgtgccg
agcagcaggaggaagctctacagcgccacctctggtcgtcatgtgctgctggtgcgctcc
tgtctgccacacgctggaggaggagagaacagcagcctgcaccgcaacggccgggtcaga
gacagccgggcggagcgcagcgacaggaagaagctcttcagacacttcactgtgggctcc
tacgacagcatggacaactccagtgactgcacgacggagcagaagacagtggtcctacag
aagcaggacagcgaggggttcgggttcgtgctgcgaggagctaaagctgacacccccatc
gaggagttcatccccactgctgcgttcccagcgctgcagtatctggagtctgtggatgag
ggtggtgtggcctggctgatggggctgcgcaccggagacttcctcactgaggtcaatcat
cagagtgtggtgaagatgggtcatcggcaggtggtgagcatgatcaaacatggaggaaac
cgactggtcattaaagtggtgagagtgagcaggaatccggacgacaaagacgacaaaaca
cggaagaaagcgcctcctccacccaaaagagcacccaccactgccctgaccatgagatcc
aaatccatgacctgtgagctagaagacccggataaagtggaagaggccgttccgccacag
aagatcatgcatgaaaaatcctcagcagacaaaactgtctcaatcaggtcccgcccctca
agccgatttttggcatccatggattttaattccgcatctgaacggccaggggtcgctgta
gttcctccgaatgttcctgggagatcccatggaggttatattcgtctgccaaagagctcc
atgagaagacagaagtccgtcggaatcgcaggagaagagaagaagttcctgatacctcca
ctgctcaagttctccagaagcctctcaatgccggacacatctgaggatattcctccacca
cctggcatctctcctccatccccaccgtacaagctcagcacgtctacagcacagggatac
gagcccaaccagtccatttacactcagaactctgccgccagatgccacaccatagaaaga
gaccaagtcgggtaccatcggcaaaactttgagccgtacgactgtcagactcatccaggc
ctcaacagggcgcatgtgccagagaatccatactcagacaaacccctgtacgtcccacca
aaaccagcccgtaggaagggcattctggtcaagcagccaaacgttgaggatagtcccgag
aagacttgttcaatatcaataccaaccattattgttaaagagccttcgactagcagtagt
ggcaaaagcagcagaggaagcagcatggaaatcgagactactggacccgagcctccagga
caacttcggcctgatgggagcgtttccaacccttttgcagctgctattgctggggcagtg
cgtgaccgcgagaagcgtctggaggcaaggaaaaactcccctgcttttttgtcaatggat
ctcggagatgaggatccgtttatccctactccccgcctacgccagtctatgtccattgat
gaaggcatgtttgccaacgataagagtttagaaaacatcatggctccaccggcctcttta
atagggagctcgcaactaagaaatgaaggaaacttgactgactttaccatcccagaacca
atgactaaacctctgacaacacgctccaggaagtgtcctgatataggtagtcccatcggc
atcgatgatgatttccaacaacaggtttcgaggaagactcatgatatttgttcacctcca
gctccgggacaatcatctggaaataaagctctgaaggagccagtgctaccgcctcttcct
ccacctaaaggagaaccacacaaagcaaacctcaaccaaccactctttatagacaccaag
ctgcggtccaatattgaaaccaactttgccgctaccacagcagtgggtcaaccaaaagat
agtgggggtttatttagacattcaagagagtctagccggcaaacagtgaaggtcagcaat
ccatctgagcagctaaagaacgctcataacacttcacagcagaagtcagcaggactcctc
atggtgcagtcactgaataaggccaagccgcaggggaacagtctgtctgatggattcctg
ctagaagagtccccagttatggatggagaacccagtgattccaaacttccaaactcccaa
acaactcccatggaggagcctggcaagttttcctctgggattcctcttccacttctgacc
tcagtggatatcgatgaggagttcgatgtagctgaacccttgcctccacctctggagttt
gccaacagcctcgacattcctgaggaccaggtagctgtgattctcaagcagaagaagaat
aatgaaacaagggccgtgcatcattctcgtgcttcaaattgcatgacatcccacgcctac
cctccaccacctccagagatgtttgagccggtcacagactcaggcattgaggaagctgac
agcagaaacagcgctggagatcctcattttgaggccaacagcacaatctccaccgtgtcc
agtatctctacgctgtcatcagagggaatcgaggatgcgtgtataacctatgcaaatggg
cagatttttctgctggaccgaccccctgttccaccaaagccaaaatctaaacccattatc
aataaaagcaatgctttttacagggaccctttgaaacaggagagcattgagtctattgga
gagcctccaccactcccacctccacctctgtgtggtgtagctcaaactgaggctcgtaaa
acactcgcgaaacacccccaggagctgccaaacccactcctacccaatgcagatcctaaa
gccaatgtaatcaatgagctcagctccaaacttcagcacatgaacaaggacagatttccc
aaacagggaggatctctcgacccacctgcagtctccagaagcatcggatcaagagaatgg
atggctcaagataccaaacgcatccacaaagtgtcttccagccccttaccccctcaggcg
tctcctcctgctggatctggacactcttctctgcccggctctgctgcatctccaacattg
acggatgtgttcagcctgccatctccacccatggggaacgcagagcagtgtttcagcatc
agctccgtcagcagccagtctctgtccccgctcacgctctttcaggccgcggccgacaag
ccgttcgctgataaacccatcccgctctggagcaaacacgacgtggctgactggctggac
accctcaacctagccgagcacaagaaggccttccttgagaatgacattgagggctcgcac
ctccccaacctccaaaaagaagacctcgtagatctgggggtaacgcgtgtgggccaccgc
atgaacatcgagaaggctctcaaactgctaatggacagataa
DBGET
integrated database retrieval system
