Danio rerio (zebrafish): 573047
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Entry
573047 CDS
T01004
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
573047 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
573047 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
573047 (lsm7)
03041 Spliceosome [BR:
dre03041
]
573047 (lsm7)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
573047 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
573047 (lsm7)
Spliceosome [BR:
dre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
573047 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
573047
NCBI-ProteinID:
NP_001041471
ZFIN:
ZDB-GENE-030131-8284
Ensembl:
ENSDARG00000058328
UniProt:
Q7SXE2
A4FVI7
LinkDB
All DBs
Position
22:10402406..10405918
Genome browser
AA seq
103 aa
AA seq
DB search
MADKDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagacaagaaaaagaaggagagtatttttgatttgtcgaaatacatcgac
aaacatatacgtgtaaagtttcaaggaggtcgcgaagcaagtggcgtcttaaaaggcttc
gacccgttgttgaatcttgtgttggacggcaccattgaatacatgcgagatcctgatgac
cagtataaactgaccgaagacaccaggcagctgggtctggttgtttgtcgagggacgtct
gttgtgctcatctgtccacaggatgggatggaagctatcccgaaccctttcatccagcag
caggatggataa
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