Danio rerio (zebrafish): 573145
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Entry
573145 CDS
T01004
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
573145 (khsrp)
03041 Spliceosome [BR:
dre03041
]
573145 (khsrp)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
573145 (khsrp)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
573145 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
573145
NCBI-ProteinID:
NP_001082897
ZFIN:
ZDB-GENE-030131-4357
Ensembl:
ENSDARG00000026489
UniProt:
A0A8M1ND02
A4QP88
LinkDB
All DBs
Position
1:complement(54960186..54972236)
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AA seq
666 aa
AA seq
DB search
MSEYSAVPPPGPGAALGAGGLKKDAFADAVQRARQIAAKIGGDVTGPPMSNNGGAESYPF
PTPKRSLEDGDQPESKKMASDRDNAAALSIGAQLAALSKQSVRPSSMTEEYRVPDGMVGL
IIGRGGEQINKIQQDSGCKVQIAPDSGGLPDRSVSITGGPEAIQKAKMMLDDIVSRGRGT
PPSFHESTNGSGHMQEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNMDK
PLRIIGDPYKVQQAREMVQEILRERDHPGFERNEYGSRMGGGGGGGGGGGGGGGGIEVPV
PRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGTGPDKIAHIMGPPDRCEHAASIINEL
LQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHKCGLVIGR
GGENVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEDKIEGPLCPV
GPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGQYPQGWGNAYQQWQPHDPSKAAT
DPNAAWAAYYAQYYQQPGGAAMPGQTPAAQPAAPGPADQSQAAPGAAQPDYTKAWEEYYK
KMAAAGGGAAPAAAGGAQPAGAAAAAGQTDYSAAWAEYYRQQAAYYGQTGQTPGQPGATP
QGQQAQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtacagcgcggtgccgccgcccgggcccggggcggctttaggagccggtggg
ctgaaaaaagacgcgttcgcggacgcggtacagcgcgcgcggcagattgcagcaaagatc
ggtggtgacgttacaggtcccccaatgagcaataacggcggagcggagagttatcccttc
ccgacgccgaagcgatcgctggaggatggagatcagcctgaaagcaagaagatggcgtct
gacagggacaacgctgcagctctatctatcggagcccagctggctgccctttccaagcag
agtgttcgtccttcgtcgatgacagaagagtacagagtccctgatggcatggttggcctc
atcattggtcgaggtggcgagcagatcaataagatccagcaggactctggttgtaaagtt
cagatcgctccagacagtggcggtcttccagacagaagtgtgtccatcacaggaggccct
gaagccatccagaaggccaaaatgatgctggacgacatcgtctctcgggggcggggcact
ccgccttcctttcatgagtcgaccaatgggagtggccacatgcaggaaatggtcattcca
gcagggaaggctggtctcattattggcaaaggaggagagaccattaaacagctgcaggag
cgagctggtgtgaagatgattttgatccaggacgcttctcaggggccaaacatggacaaa
ccactgcgcattattggagacccttacaaagtccagcaagcccgtgagatggtgcaggag
attctgcgagagcgggatcatccgggcttcgagaggaatgagtatggctctcgaatgggt
ggtggaggaggtggaggcggcggtggtggaggtggcggcggtggaattgaggttccagtt
ccacgtcactctgtgggtgtcgtgattggccgaagcggagagatgatcaagaagattcag
aatgacgccggcgtgaggatacagttcaaaccagatgacggtactggtccagataagatc
gctcatataatgggtcctcccgaccgctgtgaacacgccgccagtatcatcaatgagctt
ctgcagagcatcagagtacgagaggaaggaggagggggtccgcctggtcctcctggcaca
gggatgcctccgggtgggcgtggcagagggcgtggtcctggtggaaactggggtggtccg
cctggcagtgagatgaccttttcaattcctgcccacaaatgcggcctcgttattggcaga
ggtggtgaaaacgtgaaggccatcaatcagcaaacaggtgcatttgtggagatctcacgc
caaccaccgcccaacggagaccccaacttcaaactgttcaccatccgggggtctccacag
cagatcgaccacgccaaacagctgatcgaggacaagattgagggtcccctctgccctgtt
ggtcccggacccggtggaccaggccctgctggacccatgggcccctacaacccaaacccg
taccagcccggaccccctggtggaccgccacatggtggtcctcctggtggtcagtatcct
cagggttggggaaatgcataccagcagtggcagccacatgatcccagtaaagcagccaca
gatccaaacgcagcgtgggcggcttattacgctcagtactaccagcagccaggaggggca
gctatgcctggacagacgcctgcagctcagccggctgctcccggtcctgctgaccagagc
caagctgctccaggagcggcccagcccgactacaccaaggcctgggaggagtattacaaa
aagatggctgcagcaggtggaggtgctgcacccgccgctgcaggaggagctcagcctgca
ggagctgcagcggcagcaggacagacagactacagcgccgcatgggccgaatactacaga
cagcaggctgcttattacggacagacaggacagaccccgggtcagccaggggcaacaccg
cagggccagcaggcgcagtga
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