KEGG   Danio rerio (zebrafish): 58038
Entry
58038             CDS       T01004                                 
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    58038 (stx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    58038 (stx1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    58038 (stx1b)
Membrane trafficking [BR:dre04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    58038 (stx1b)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   58038 (stx1b)
  Exosomal proteins of other body fluids (saliva and urine)
   58038 (stx1b)
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 Lzipper-MIP1 Spectrin_Anc-1 Relaxase_C GNVR Baculo_PEP_C ARM_ECM29 TolA_bind_tri VBS_C3G9 CAP_N
Other DBs
NCBI-GeneID: 58038
NCBI-ProteinID: NP_571598
ZFIN: ZDB-GENE-000330-4
Ensembl: ENSDARG00000000503
UniProt: Q9I9P6
LinkDB
Position
19:complement(5163938..5254380)
AA seq 288 aa
MKDRTQELRSAKDSDDDEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLRSSIGGTLGF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggatcgcacgcaggaactacgaagtgctaaggacagtgacgatgacgaggaagtc
gttcatgtcgaccgagaccactttatggatgaatttttcgaacaggtggaggagatccgc
ggctgtattgaaaagctgtcagaggatgtggaacaggtgaagaagcagcacagtgccatc
ctagcagcaccaaaccctgatgaaaagactaagcaggagttggaggacctcacagctgac
attaagaagacagccaataaagtgcgctctaaattaaaagctatcgaacaaagtatcgag
caagaggaagggttgaacagatcatctgcagatttgcggatccgcaagacacagcattcc
acgctgtcacgcaagtttgtggaggtgatgacagagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtattcagagacaactggaaattactggcagaacaactacc
aatgaggagctggaagacatgttggagagtgggaagcttgcaatcttcactgatgatatc
aaaatggactcccagatgaccaagcaggcactaaatgagattgagacccgacacactgag
atcattaagttggagaacagcatccgtgagctgcacgatatgtttgtggacatggccatg
ctggtggagagtcagggagagatgattgacagaattgagtataacgtggaacactctgtg
gactatgtagagagagcggtttctgacaccaagaaggctgtcaaataccagagtcaggca
cgcaagaagaagatcatgatcatcatctgctgtgtaattttgggagtggttttgcggtcc
agtatcggaggaaccctgggcttctaa

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