Danio rerio (zebrafish): 58038
Help
Entry
58038 CDS
T01004
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
58038 (stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
58038 (stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
58038 (stx1b)
Membrane trafficking [BR:
dre04131
]
SNARE
Syntaxin (Qa)
Stx-PM
58038 (stx1b)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
58038 (stx1b)
Exosomal proteins of other body fluids (saliva and urine)
58038 (stx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Spectrin_Anc-1
Relaxase_C
GNVR
Baculo_PEP_C
ARM_ECM29
TolA_bind_tri
VBS_C3G9
CAP_N
Motif
Other DBs
NCBI-GeneID:
58038
NCBI-ProteinID:
NP_571598
ZFIN:
ZDB-GENE-000330-4
Ensembl:
ENSDARG00000000503
UniProt:
Q9I9P6
LinkDB
All DBs
Position
19:complement(5163938..5254380)
Genome browser
AA seq
288 aa
AA seq
DB search
MKDRTQELRSAKDSDDDEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLRSSIGGTLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgcacgcaggaactacgaagtgctaaggacagtgacgatgacgaggaagtc
gttcatgtcgaccgagaccactttatggatgaatttttcgaacaggtggaggagatccgc
ggctgtattgaaaagctgtcagaggatgtggaacaggtgaagaagcagcacagtgccatc
ctagcagcaccaaaccctgatgaaaagactaagcaggagttggaggacctcacagctgac
attaagaagacagccaataaagtgcgctctaaattaaaagctatcgaacaaagtatcgag
caagaggaagggttgaacagatcatctgcagatttgcggatccgcaagacacagcattcc
acgctgtcacgcaagtttgtggaggtgatgacagagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtattcagagacaactggaaattactggcagaacaactacc
aatgaggagctggaagacatgttggagagtgggaagcttgcaatcttcactgatgatatc
aaaatggactcccagatgaccaagcaggcactaaatgagattgagacccgacacactgag
atcattaagttggagaacagcatccgtgagctgcacgatatgtttgtggacatggccatg
ctggtggagagtcagggagagatgattgacagaattgagtataacgtggaacactctgtg
gactatgtagagagagcggtttctgacaccaagaaggctgtcaaataccagagtcaggca
cgcaagaagaagatcatgatcatcatctgctgtgtaattttgggagtggttttgcggtcc
agtatcggaggaaccctgggcttctaa
DBGET
integrated database retrieval system