Danio rerio (zebrafish): 58046
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Entry
58046 CDS
T01004
Symbol
hoxc1a
Name
(RefSeq) homeobox protein Hox-C1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
58046 (hoxc1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
58046 (hoxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
DUF7255
Homeobox_KN
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
58046
NCBI-ProteinID:
NP_571606
ZFIN:
ZDB-GENE-000822-2
Ensembl:
ENSDARG00000070337
UniProt:
Q98SH9
B3DHA1
LinkDB
All DBs
Position
23:36178104..36183497
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AA seq
302 aa
AA seq
DB search
MNSYHGFRDTTSLFIKGYHATGVMRLHQDHGSTADFPSREDVNNEADFLQYHFTNLCATA
TGACSKPCEDPGRANSTRPPFPQNQDFYRPVHPNRPQVPSFQSCREQGLSRKGFSPSSDT
FRTFSSAHCELGPVNNTQTEVRTYDGPVRHSAVEDDNTGHGALNTLNETLHSGKTFEWMR
VRRNQSRAAKIQLGKCSDRELKTNHGRDSDEDTSSGGSRTNFTTKQLTELEKEFHFNKYL
TRARRIEIANPLQLSETQVKIWFQNRRMKQKKMLREGLAQGLMLISGCDEDSKKSDTCSS
PD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttatcatgggttcagggacacaacgtcacttttcatcaagggctatcatgct
actggagtaatgcgtctgcatcaggaccacggatcaactgctgacttcccaagcagggag
gatgtcaacaacgaggcggattttcttcaatatcatttcacgaatctctgtgccacggcc
acaggcgcgtgctcaaagccctgtgaagaccctggccgtgctaactctaccagacccccc
ttcccccaaaatcaagatttctatagaccagtgcaccccaatcgaccccaagtcccctcc
ttccaaagctgtcgtgagcagggtctctccagaaagggcttctcgccttcatcagacact
ttcagaactttctccagcgcgcactgtgaactcggccctgtcaacaacacacagaccgaa
gtgcgcacatacgacggcccagtgcgtcactccgcagtggaggatgataatactggacac
ggggctctaaacacgttaaacgagactttacacagtggaaagacattcgaatggatgaga
gtgaggagaaatcagtcccgtgcagctaagatacaactgggaaaatgctcggaccgggag
ctgaagacgaaccacggacgagattctgacgaggacacttcgagtggaggctcgcgaact
aattttacaacgaaacaactcacagaacttgaaaaggagtttcatttcaacaaatatctg
actcgagccagacggatagagatcgcaaaccctctccagctgagcgaaacacaagtgaag
atctggtttcagaacagacgcatgaaacagaagaaaatgctgcgggaaggcctagctcaa
ggattaatgctgatttctggatgtgatgaggactcgaaaaaaagtgacacttgttcatct
cctgattaa
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integrated database retrieval system
