Danio rerio (zebrafish): 58089
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Entry
58089 CDS
T01004
Symbol
trpc4apb
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein b
KO
K11796
Trpc4-associated protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
58089 (trpc4apb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
58089 (trpc4apb)
Protein phosphatases and associated proteins [BR:
dre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
58089 (trpc4apb)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
58089 (trpc4apb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
58089
NCBI-ProteinID:
NP_001297022
ZFIN:
ZDB-GENE-000330-2
Ensembl:
ENSDARG00000020647
UniProt:
A0A8M1P2D2
LinkDB
All DBs
Position
23:complement(18759535..18777950)
Genome browser
AA seq
793 aa
AA seq
DB search
MATRGPGFSRTQTRRGKPCKNIFHKIRQGQVTGEGLTRGSQVPVALLEERDKRAQWQGIP
VLLRRLHKSSHPNSDLSKIHSIVMELSSLLSMEAISFVTEERKMPQESISPNTYTFDLFG
GVDLFMEILMRPTLTIQQNTPTMSDDLIKDCLSVLYNCCICTEGVTKSLAAREDFVMYLF
TLMSNKKVFLQTATLIEDILSVRKEIIQLEEIPNLDSLVQSFNQQQLANFCRILSVTISE
PDVGVDDKHTLLARSTQQKTSTCPSHAENNQVALLNIPGFIERLCKLATRKVTEAADASA
RLELEDWHSWLDNALVLDTLMQLAIEEAEQSSTESSDESSLSSSPLRHRLPQSMKIVHEI
MYKVEVLYVLCVLLMGRQRNQVHRMLAEFKLIPGLNNLFDKLIWRKQPFGHILHRQNQSC
DCSPEISFKIQFLRLLQSFSDHHENKYLLLSGQELNELSDIYLNANIFEMEALNNTDRNL
VCDGKKGLLTRLISVMKKEPIDSSFRFWQARAVESFLRGTPSYADQVFLLRRGLLEHILY
CIIDSGCKSHDVLQSYFDLLGELMKFNIDAFKRFNKYVTTEEKFQMFLTQINSSLVDSNM
LVRCIVLSLDRFENETNDVKVVEVFSECRLLSYMAQVENRLLFLLRLISIINVQTLTQEN
VSCLNTSLVILMLARRRGKLPLYLSALREKEYSEKYPGCLLNNFHNLLRFWQHHYLNKDK
DSTCLENSSCIPFTYWKETVSVLLGSGRSSRCAIATYIDEPYRDLDRDFMELSLETERTL
FTSQTHPACGYNS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagaggccctggtttttctcggacccaaacaagacgaggaaaaccatgcaaa
aacatctttcataaaattcgacaaggccaagtcaccggcgaggggttaactagaggatca
caggttcctgtggctttgttggaggagagagacaaaagagctcaatggcaggggattcca
gtgttactaaggaggcttcataagagcagccatcctaacagcgatctctccaagattcac
agcatagtcatggagctgtcgtcattactgtccatggaggccatttcatttgtcacagag
gagcggaagatgccacaggagtccatttcgcctaatacatatacatttgacttgtttgga
ggagttgatttgtttatggagattttaatgcggccgacactcacaatacagcaaaacaca
cccacaatgagtgatgatctcattaaggattgtttaagtgtactgtacaactgctgtata
tgtacagagggcgttacaaaaagccttgcagcgagggaggatttcgttatgtacctgttc
actctcatgtccaacaaaaaagttttcctacaaactgccactcttatagaggacattctg
agcgtacgaaaggaaattatccagctggaagaaattcccaatttggacagtctggttcag
agcttcaaccagcaacagcttgccaacttttgtcggatcctgtcagtcaccatatcagag
ccggacgtgggtgttgatgacaagcacactctcctagcccgcagtacccagcaaaaaacc
agcacatgtccatcacacgctgagaacaaccaggtggctctattgaacatcccaggtttc
attgagcgcctttgtaaactcgccacaaggaaagttacggaagcggcggatgcctctgcc
aggctggagctggaggactggcacagctggcttgacaatgcactggtgctggacactctc
atgcagctggcaatagaggaggcagagcagagcagtacagagtcgtctgatgagagctct
ctgtcctccagtccactcagacacagactgcctcagtctatgaagatagtgcacgagatc
atgtataaagtggaggttctctatgtgctgtgtgtgctgcttatgggccgacagcgaaat
caggttcacagaatgttggcagagttcaagttaattccaggactcaataacctatttgat
aagttaatctggaggaagcagccgtttggtcatattctgcatcggcagaaccagagctgt
gactgcagtccagagatctccttcaagattcagttcctcaggctcctgcagagcttcagt
gatcatcacgagaataaatatcttctactaagtggacaggagctgaatgaactgagtgac
atctatctgaatgctaacatctttgaaatggaagcactgaacaacacagacaggaatctt
gtgtgtgatggtaaaaaaggtcttcttacacggttaatctcagtcatgaagaaggagcca
attgactcttcattcaggttttggcaggcaagagcagtggagagctttttgagaggaacg
ccatcatatgctgatcaagtgtttcttctcagaagaggcttattagagcacattctctat
tgcatcattgacagtggctgcaagtcccatgacgttcttcagagttactttgacttactt
ggtgagctcatgaagttcaacatcgatgccttcaaaagatttaacaaatacgtcaccact
gaggagaagtttcagatgttcctgactcagatcaacagctctctggtggactccaacatg
ctggtgcgatgtatcgtcttgtctttggaccgcttcgagaatgagactaatgacgtgaaa
gtggttgaagtgttttcagagtgccgcctcttgtcctacatggctcaggtggaaaacagg
ttgctcttccttttaagactgatcagcatcatcaatgtacaaaccctcactcaggagaac
gtgagctgtctgaacaccagtctggtgattctgatgctggcgaggagacggggcaagctg
cctctgtacctaagcgctctgcgggagaaggagtattcggagaaataccccggctgcctg
ctcaacaacttccacaacctgctgcgcttctggcagcaccactacctcaacaaagacaag
gacagcacctgcctggagaatagttcttgtattccctttacatactggaaggagaccgtc
tcagtgctgctggggtctggtagaagctctcgctgtgccattgccacctatatcgatgaa
ccctacagagacctggacagagacttcatggagctttcactagagactgagaggactctc
tttacatcacaaacacatcctgcctgcggttataacagctag
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