Danio rerio (zebrafish): 60641
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Entry
60641 CDS
T01004
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
60641 (sox9a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
60641 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
60641
NCBI-ProteinID:
NP_571718
ZFIN:
ZDB-GENE-001103-1
Ensembl:
ENSDARG00000003293
UniProt:
Q9DFH2
A0ACM8PZW3
LinkDB
All DBs
Position
12:complement(2229481..2233121)
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AA seq
462 aa
AA seq
DB search
MNLLDPYLKMTDEQEKCLSDAPSPSMSEDSAGSPCPSASGSDTENTRPAENSLLAADGTL
GDFKKDEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQA
ARRKLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRR
RKSVKNGQSESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPSEHSGQSQGPPTPPT
TPKTDTQPGKADLKREARPLQENTGRPLSINFQDVDIGELSSDVIETFDVNEFDQYLPPN
GHQNAPYAGGYAAWMTKPQNGSPQSSQLTPLNPAEPDQPRTTHIKTEQLSPSHYNEQQGS
PQHISYGSFNVQHLQHYSTSFPSITRAQYDYSDSHQGGASSYYTHAGGQSSGLYSTFSYM
SSSQRPMYTPIADSTGVPSIPQSNHSPQHWDQQPVYTQLSRP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccctacctgaagatgacggatgagcaagagaagtgtctgtctgat
gcacccagtccgagcatgtccgaggactccgcgggctcgccctgcccgtccgcctcgggc
tcagacactgagaacacgcgcccggcggagaacagcctcctggctgcagacgggacgctc
ggagacttcaagaaggacgaagaggacaagttcccggtgtgcatccgagaggcggtgtcc
caggtgctgaagggttacgactggacgctggtgcccatgccggtgagggtgaacgggtcc
agcaaaaacaagccgcacgtcaagagaccgatgaacgcgtttatggtgtgggcgcaggcg
gcgcgcaggaaactggccgaccagtacccgcacctccacaacgcggagctcagcaaaact
ctgggaaaactttggagattactgaacgaggtggaaaagcgtcccttcgtggaggaggca
gagcgccttcgggtgcagcacaagaaagatcaccccgactacaagtaccagccccggcgg
aggaagtcggtgaagaacggccagagcgaatctgaagacggcagcgaacagacccacatc
tcgcccaacgccatcttcaaagcgctccagcaggcggactcgcccgcgtccagcatggga
gaagtgcactcgcccagcgaacactcaggccagtcccaggggccgcccactcctcccacc
accccgaaaactgacacacagccaggcaaagcggatctgaaacgagaggcccgtcctctt
caggaaaacaccggacgtccgctcagcatcaacttccaggacgtggatatcggcgagctg
agcagcgatgttatcgaaacattcgacgtcaatgagtttgaccaatacctcccgccgaac
ggtcaccagaacgcaccctacgctggaggatacgccgcctggatgaccaaaccccaaaac
ggcagccctcaaagcagccagctgaccccgctgaaccccgcagaacccgaccagccccga
acgacgcatattaaaaccgaacagctcagcccgagccattacaacgagcagcagggctct
ccgcagcacatcagctacggttccttcaacgttcagcatctccagcattacagcacttca
tttccctccatcaccagagcgcagtacgactattccgacagccaccagggcggcgccagc
tcctattacacccatgccggaggtcagagctccgggctgtactccaccttcagctacatg
agctcaagccagaggcccatgtacacacccattgctgactctacaggggtgccctccatc
cctcaatccaaccacagtccgcagcattgggaccagcagccggtgtacacgcagctgtcc
agaccatga
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