Danio rerio (zebrafish): 619412
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Entry
619412 CDS
T01004
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
dre04144
Endocytosis
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
619412 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
619412 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
619412 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
619412 (nedd4a)
04121 Ubiquitin system [BR:
dre04121
]
619412 (nedd4a)
03029 Mitochondrial biogenesis [BR:
dre03029
]
619412 (nedd4a)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
619412 (nedd4a)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
619412 (nedd4a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
HECT type E3
619412 (nedd4a)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
619412 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
619412
NCBI-ProteinID:
XP_073786232
ZFIN:
ZDB-GENE-051005-2
Ensembl:
ENSDARG00000099843
LinkDB
All DBs
Position
18:2824529..2928817
Genome browser
AA seq
1236 aa
AA seq
DB search
MARHLRLHFASRRSNTDPLSETCSVHTEESGLTNAGRSSSEGLAQSSLHMKVTPGQLSLA
LPPLSPEYGNLQRHSSVFVPKVNGSRKSTLQISLQSCKQSADADGSSAGEDGELANCESG
NGDGGSCCSSTTSDPGYSSSNSIFEAEDRKPIFRRKTRAPLRRCSSLVIFPRSPCTTPPA
SPVSPVASPMIPPLPPSARSSFQTSHQMQLSSDTSHTDATSKASVATAVNGLRLSKTSTS
AEHRDAKTIVHFSVPPEQPAGPDRTERHSSVLLHFANQRQLPSGKETKLDPSKPHEGPQA
TDNAPERQKAKLYRSTSACMLPTGRPSSTERRHDTFPSSRNSDKSSRKGSQRVLHRSISL
EVPCAKAEISCHVSNAADNIYNNCTPHVHIHVSHGTGGRKSNVQQDNSVNDKSDHVPTCT
ETNTTTRDDFLGQVDVPLHQIPTEHPNNERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLP
KNSDAEDDPAEQGENLDPGWEFLEPHELCSPHHPHQLPALPPGWEERQDNLGRTYYVNHE
SRTTQWHRPTIQDSQRDNEQRQETHSESQRAFLTRRQISEHEENHERRESPESWEIITAD
ESTLYSSLSERSPPPPHSPMEISTFCEEFNRLQATNDRRTSLTPQGHGSRRGSGQTLTME
EHPVHPVLLPTSAGLPPGWEEKQDSKGRIYFVNHNSRTTTWTRPLIQLIQPPSESPASPM
ASGSTSLSQNAAGYALPPDVSPQHTHTHTHTHTPEHPGLMPTGWEVRSAPSGRPFFIDHN
TKTTTWDDPRLKVPVQMRRRVSLDPTDLGPLPPGWEERVHSDGRIFYIDHNTKTTQWEDP
RLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPAEIPNRFELSVRRNAVLEDSYRRILSVK
RSELLKARLWVEFEGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNS
GLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNS
LRWILENDPTDLDLRFTIDEELFGQTHQHELKPGGADIVVNDTNKKEYIHLVMQWRFVDR
IQRQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYNPNHPA
IIWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTREKLPRA
HTCFNRLDLPPYESFEELREKLHMAIENAQGFDGVD
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcatctgcgactacatttcgcttcgcggagaagcaacaccgaccctctgtca
gagacctgtagcgttcatactgaagaaagtgggctgacgaatgctggacggagctctagc
gagggcctggcgcagagttccctccacatgaaggtgactccaggacagctgtctctggct
ttgccacccttgtcaccagagtatggtaatttacagcgccactccagtgtgttcgtcccc
aaggtgaacggaagcaggaaaagtacgctgcagatttctttgcagtcctgcaagcagagc
gctgatgcggatggtagcagtgctggagaagacggagagctcgcaaactgcgaaagtgga
aatggggacggtggttcttgttgcagcagcaccacaagcgatcccggctactcgagcagc
aacagcatattcgaagcagaagatcgcaagcctatctttcggagaaagacaagggctccc
ttgcggcgctgctcatccctggtgatttttccacggagcccatgcaccacgccaccggca
tcccctgtcagtccggtggcgtctcccatgattcctccgctgccgccgtctgcacggagc
tctttccagacgtctcatcagatgcagctgtctagcgatacatcacacactgatgcaaca
tccaaagcgtccgtcgccactgcagttaatggtctacggctgtccaaaaccagtacgtca
gcagaacacagagatgccaaaactattgtgcatttcagcgtgcccccagaacaaccagca
ggaccagaccgcacggaaagacactccagcgttttattgcacttcgcaaaccagcgacag
cttccctcagggaaagaaacaaagcttgacccttccaaacctcatgagggcccacaagca
accgataacgccccagaacggcagaaagcaaagctttaccgtagcacctcagcctgcatg
ctgccaaccggaagaccgtcatcgacagaaagaagacacgacacttttccctccagcaga
aattcggataaatcctcaagaaaagggtctcagcgcgttcttcacagaagcatttctcta
gaggtgccctgtgcgaaggctgagatttcttgccacgtttcaaacgcagcagacaatatc
tacaataattgcactccacacgtacacatccatgtgtctcatggtacaggtggcagaaag
tccaacgtccagcaggacaacagcgtaaacgacaaatcggatcatgttccgacctgcaca
gagacaaacactaccacaagggatgacttccttggacaagtggatgttcctctgcaccag
atccctacagaacatccaaacaatgaaaggccgtacactttcaaagacttcttattgcac
ccgagaagtcacaagtcgagggtgaaaggtcatctgcgtctaaagatgacgtacctgcct
aaaaacagcgatgcagaggacgaccccgctgaacagggcgagaatctggatccgggttgg
gagtttttggagcctcatgaattatgcagtcctcatcatccgcatcagctgcctgcgctg
ccccctggctgggaggagaggcaggacaacctgggacgaacttactacgtcaaccacgag
agcaggaccacacagtggcacagacccaccatccaggacagtcaaagagacaatgagcag
agacaggaaacacacagcgagtcccagcgggcctttctcacacgcagacaaatatcagaa
catgaggagaaccacgagcgcagagagtcacctgagagctgggagatcataacagcagat
gagtcgacgctgtacagcagcctcagtgagcgctcgccgccgccgccacactccccgatg
gagatcagcactttctgtgaggagttcaacagactgcaggccacaaacgacagacgcacg
tccctcacgccgcagggtcacggcagccgcagaggaagtggacagaccctcacgatggag
gagcatcctgttcacccagtgttattgcccacctccgccggcctgcctccgggatgggag
gaaaagcaggacagcaaaggaagaatttattttgtcaatcataacagcagaaccacaacc
tggacacggccactcattcagctcatacagccgccctcagagtctccagcatccccgatg
gccagcggatcaacgtctctttcccagaatgccgcaggctacgctctgcccccagacgtg
tccccacagcacacacacactcacacacacactcacacgccggagcacccaggactgatg
ccgactggctgggaagtgcgcagcgctccaagcggacggcccttcttcatcgaccacaac
accaagaccaccacatgggacgacccacggctgaaggttccagtgcagatgaggaggaga
gtctccctcgaccccactgacctcggcccgctgccgcctggttgggaggagcgagtgcat
agtgatggcagaatcttctacattgatcacaacacaaaaaccacacaatgggaagaccca
cgactacagaattcagccatcactggtccagccgtgccttactccagagactataaacag
aagtacgagtatttccgcaagaaactcaagaaaccggcagagatcccgaatcgcttcgag
ctgagtgtgcggcgtaacgcagtgctggaggactcatacagacgcatcctgtccgtcaag
cgctcggagctgctgaaggcccgcctctgggtggagtttgagggagaaaaggggctggac
tatgggggcgtggccagagagtggttcttcttgatctccaaggaaatgttcaatccgtat
tatgggctgtttgagtattcagccacggacaactacaccctgcagatcaacccaaactca
ggtctgtgtaacgaggaccacctctcctactttaagttcatcggccgggtggctggtatg
gcggtttatcacgggaagctgctggatgcattcttcatccgaccattctacaagatgatg
ctgcagaagccaatcacgttacaggatatggagtcagtggacagcgagtattttaattcc
ctcaggtggatcctagaaaacgaccccacagacctggacctccggttcaccatcgacgag
gagctttttggacagacgcaccaacatgagctgaaaccaggaggtgctgatatcgtggtc
aatgacaccaacaagaaggagtacattcatctggtgatgcagtggaggtttgtggatcgc
atacaaagacagatgacggcctttaaggagggtttctatgagctgattcctcaggacctg
atcaagatctttgatgaaaatgagctggagctgctgatgtgtggtttaggagacgtggac
gtcaacgactggagagaaaacaccaaatataaaaatggctacaacccaaatcatcccgcc
atcatctggttctggaagacggtgttgctgatggatgctgaaaagcgaatccgtttgctg
cagtttgtgacaggaacgtctcgcgtaccaatgaatggcttcgcagaactctacggatcc
aacgggcctcagttgttcaccatcgagcagtggggcacgagggaaaaactgccccgagca
cacacctgcttcaacagactggatcttcctccgtacgagtcgttcgaggagctgcgagag
aagctgcacatggccatcgagaacgcacaaggctttgatggagtcgactaa
DBGET
integrated database retrieval system
