KEGG   Danio rerio (zebrafish): 641289
Entry
641289            CDS       T01004                                 
Symbol
uba52
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03010  Ribosome
dre04120  Ubiquitin mediated proteolysis
dre04137  Mitophagy - animal
dre04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    641289 (uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    641289 (uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    641289 (uba52)
   04137 Mitophagy - animal
    641289 (uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dre03011]
    641289 (uba52)
   04121 Ubiquitin system [BR:dre04121]
    641289 (uba52)
Ribosome [BR:dre03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    641289 (uba52)
  Archaea
    641289 (uba52)
Ubiquitin system [BR:dre04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   641289 (uba52)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 TBK1_ULD zf-C4pol OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 641289
NCBI-ProteinID: NP_001032190
ZFIN: ZDB-GENE-051023-7
Ensembl: ENSDARG00000041435
UniProt: Q3B7P7
Structure
LinkDB
Position
2:complement(56339058..56348742)
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaacgttgaccggtaaaaccatcaccctcgaggtggagcccagc
gacaccatcgagaatgtcaaggctaagatccaggacaaagaaggaatcccgcctgatcag
cagcgtctgatcttcgctggtaaacagttggaggatggacgcacactgtcagactacaac
atccagaaagagtccactcttcacctggtgctgcgtctgagaggaggaatcatcgagcct
tctctccgtcagttagctcagaaatacaactgtgagaagatgatctgccgcaagtgttat
gctcgtctgcatcctcgtgccgtcaactgccgcaagaagaagtgcggacacaccaacaac
ctgcggcccaagaagaagctgaagtag

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