Danio rerio (zebrafish): 64812
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Entry
64812 CDS
T01004
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
64812 (sox19b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
64812 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
64812
NCBI-ProteinID:
NP_571777
ZFIN:
ZDB-GENE-010111-1
Ensembl:
ENSDARG00000040266
UniProt:
Q9DDD7
LinkDB
All DBs
Position
7:complement(26514435..26517791)
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AA seq
293 aa
AA seq
DB search
MMYSMMEHELKTAGPPHTLQHSPGMSPPGSGVGNAHHVSKTACPPGVDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVHMKEYPDY
KYKPRRKTKALMKKDNSVGKYPLAAGNLLASAVAQGQGGSPRMDGYGWGHAGGYMGMQGD
ALGYPQQLHRYDLSALQYPAAQPYMNSASSYSQMSYSSSPQQPSPVMSMVKPEPLSHSPT
GVPNHHRGAFQGDLRDMISMYIPGGDTSESSNQRAYPGVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcacgagctgaagaccgctggtccaccccacaccctccag
cacagcccgggcatgtctcctccgggcagcggggtgggaaacgcgcaccacgattcgaaa
accgcttgtccgccaggcgtggacccgatggacaaagtcaagcggcccatgaacgcgttt
atggtctggtctcggggtcagaggaggaagatggcccaggagaaccctaaaatgcacaac
tctgagatcagcaaacggctcggcgcggagtggaaacttttaacggacgtggagaagcgg
ccgttcatcgacgaggccaagcggctgcgggcggtgcacatgaaggagtaccccgactac
aaatataagccccggcgcaagaccaaagctctcatgaagaaggacaatcctgtcggcaaa
tatcctcttgcagcgggcaacttgttggcatcggctgtggcgcagggacaaggtggcagc
ccgaggatggacggctacggctggggtcacgccggtgggtacatgggcatgcagggggac
gcgctcggatacccgcagcaacttcaccggtacgatctgtcagctctgcagtacccggcg
gcacagccctacatgaacagcgccagctcttacagtcaaatgtcctacagcagcagtgct
cagcagcccagtccggtgatgtccatggttaaaccagaacccctgtcgcattcacccact
ggagtaccaaaccaccaccgtggtgctttccaaggggacctgagggacatgattagcatg
tacattccaggcggtgataccagcgaaagctcaaaccagagggcttaccctggtgtccaa
cagcactatcttggtggaactgttcccctcactcacatctga
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