Danio rerio (zebrafish): 65233
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Entry
65233 CDS
T01004
Symbol
six4a
Name
(RefSeq) homeobox protein SIX4a
KO
K15615
homeobox protein SIX4
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
65233 (six4a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
65233 (six4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
CycT2-like_C
Motif
Other DBs
NCBI-GeneID:
65233
NCBI-ProteinID:
NP_571793
ZFIN:
ZDB-GENE-010201-2
Ensembl:
ENSDARG00000004695
UniProt:
A4IG26
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Position
13:complement(35044244..35054522)
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AA seq
593 aa
AA seq
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MSVSSSEVTVPGDIKKENVKYTELLESSTANQEHVKLLTLDSPVATGMRVGQQTSPPARK
MPTMDSLFAHSSPAVTATSLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNE
SILRAQALVAFHQARYQELYSILESHSFSPSCHSALQDLWYKARYTEAEKARGRPLGAVD
KYRLRRKFPLPRTIWDGEETVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQ
VSNWFKNRRQRDRNPSETQSKSESDGNHSTEDESSKGQESLSPCPMSTCADGPVSNTALP
LCSGSLDAGVIVQQVADSRTSISPPSVIFNGVSVHSPASVFHNGTPSFLSSTGHVLFSGM
NLGLQSLACRPTDVEMDGAAQEKGGTADPALAYSSFHCSVNGTDVEVKEEDLRKDVSVQD
QAPSIGSAFSITPSNGLQIDSYSLVTEGNKVVLPSLQLTVSSSPSSVTQGVVDCSSPVCQ
ERLQLTSLEPSSTLYSLGNIHTLSAVKKEPLEPPGGFLYHLGYSSDPTHSSPLLAQTDLP
TEFRGHTDHMTSSVNGDFLCAVSEGGKGEMEEEEEKQLTKLKTVHLEEEMTDL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttcctctagtgaagtgacagtgccaggcgacatcaaaaaggaaaatgtgaag
tacacggagcttctcgagagctccacggccaatcaggagcacgtcaaactcctgactctg
gacagtccggtggccactgggatgcgcgtgggccagcagacctctccaccggcgcgcaag
atgccaactatggactctttgtttgcgcacagttcgcccgcagtaaccgcgacctctttg
gctttctcaccggagcaggttgcgtgtgtttgcgaggcgcttcagcaggggggcaacgtg
gaccgactcgcccgttttctgtggtctctcccgcagagcgacttattgcgcggtaacgag
agtatcctccgcgctcaggcactcgtggctttccaccaggcgcgctaccaggagctttac
agcatcttggagagccacagcttcagcccctcgtgtcactctgccctgcaggacttatgg
tacaaagcccggtacacggaggcggagaaggcccgcggtagaccgctgggagcagtagat
aaatatcgcctccgacgaaagtttcccctaccccggaccatctgggatggagaggagacg
gtgtactgcttcaaagagcgctccaggaacgcgctgaaggatctctataagcagaaccgg
tacccgtccccggccgagaagaggaatctggccaagatcacaggactgtccttgacacaa
gtcagcaactggttcaaaaacaggaggcagcgagacagaaacccatcagagacgcagtcc
aaaagcgagtcggatggaaatcacagtacggaggatgagagcagtaaaggtcaggagtct
ctctctccatgcccgatgtccacctgcgctgatgggccagtgagtaacacagctctgcct
ctctgctccggctctctggacgccggagtgatcgtccagcaggttgcagacagcaggacc
tctatctctccaccctccgtcatcttcaacggagtctcagttcactcacctgcctctgtt
ttccacaacggcaccccttcatttctctcctccacgggacacgtcttgttcagtggcatg
aatttgggactccagtctttggcttgcagacctacagatgtggagatggacggtgcagca
caggagaaagggggaacggcagaccctgcactggcctactcttcatttcattgcagtgtc
aatgggacggatgtagaggtgaaagaagaagatttgaggaaggacgtttcggtgcaggac
caagcaccgtctattggttcagcattcagcatcactccatctaatggcttgcagattgat
agttatagtttggttactgaaggaaacaaggttgtacttccctccctgcaactcacagta
tcttcttcaccctcatcagtcacacagggtgttgttgactgcagttctccagtgtgtcag
gagcggctccagctcacctctttggagcccagcagcacactctacagcctgggcaacatt
cacacattgtctgccgtcaagaaggagccactggagcctcctggaggattcctttaccac
ctgggttactcatctgaccccacgcacagctcgcccttactggcccaaacggacctgccc
acagagttcagaggtcacactgaccacatgacctccagcgtaaatggagacttcctatgt
gctgtttctgagggaggaaagggagaaatggaggaagaagaggaaaaacaactgacaaaa
ctaaaaactgtgcatttagaggaagagatgaccgacctttga
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