KEGG   Danio rerio (zebrafish): 664748
Entry
664748            CDS       T01004                                 
Symbol
shoX
Name
(RefSeq) short stature homeobox protein
  KO
K09331  short stature homeobox protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    664748 (shoX)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    664748 (shoX)
SSDB
Motif
Pfam: Homeodomain OAR Homeobox_KN MRP-L20 Formyl_trans_C_2 CCDC53 AcrF31
Other DBs
NCBI-GeneID: 664748
NCBI-ProteinID: NP_001119883
ZFIN: ZDB-GENE-051030-21
Ensembl: ENSDARG00000025891
UniProt: B0S5T0
LinkDB
Position
9:36279084..36342124
AA seq 285 aa
MEELTAFVSKSFDQKTKESSKESITYREVLESGLARARELGNSETNLQEITETNNNHCPV
HLYKEHVELEKEKLKEFSVTRASDGIYDCKDKKEDVKSEDEDAQSKLKQRRSRTNFTLEQ
LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTA
SHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVGTHSHPHLHPHLAAHAPYLMFPPPPFG
LPIASLADSASAAAAVVAAAKSNSKNSSIADLRLKARKHAEALGL
NT seq 858 nt   +upstreamnt  +downstreamnt
atggaagaactcacggcgttcgtgtcgaaatccttcgatcagaaaaccaaggagagcagc
aaagagagcatcacgtacagggaagttttggagagtggtttagcccgagccagagagctg
ggaaactcggagaccaaccttcaggagattactgaaacaaacaacaaccattgtccggta
catctttacaaggagcacgtagagctggaaaaggagaaattaaaggagtttagcgtgaca
agggcttctgacggaatttatgactgcaaagacaagaaggaggatgtgaaatcagaggac
gaggacgcacagagtaaactgaagcagagacggagcaggacaaattttaccttagagcag
ctgaatgaactggagcgcttgtttgatgagacgcattacccagacgccttcatgcgggag
gagttgagtcagagactggggctgtctgaggcccgcgtgcaggtatggtttcaaaacaga
agagcgaaatgccggaaacaggaaaatcaaatgcacaaaggcgttattctgggcaccgcg
agccacctggacgcgtgcagggtcgctccttacgtgaatatgggcgcactcagaatgcca
tttcaacaggttcaggctcagttgcagttggagggggtcggaacacactcccatcctcac
ctgcacccacacctcgcagcccacgctccatatctgatgttccctcctccgccctttgga
ttaccgatcgcgtcgctggcagactcggcctctgcagcggccgccgtggttgctgctgcc
aagagcaatagcaagaactccagcatcgctgacctgcgactcaaggcaagaaaacacgcc
gaggcgctgggactctga

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