Danio rerio (zebrafish): 664748
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Entry
664748 CDS
T01004
Symbol
shoX
Name
(RefSeq) short stature homeobox protein
KO
K09331
short stature homeobox protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
664748 (shoX)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
664748 (shoX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
Formyl_trans_C_2
CCDC53
AcrF31
Motif
Other DBs
NCBI-GeneID:
664748
NCBI-ProteinID:
NP_001119883
ZFIN:
ZDB-GENE-051030-21
Ensembl:
ENSDARG00000025891
UniProt:
B0S5T0
LinkDB
All DBs
Position
9:36279084..36342124
Genome browser
AA seq
285 aa
AA seq
DB search
MEELTAFVSKSFDQKTKESSKESITYREVLESGLARARELGNSETNLQEITETNNNHCPV
HLYKEHVELEKEKLKEFSVTRASDGIYDCKDKKEDVKSEDEDAQSKLKQRRSRTNFTLEQ
LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTA
SHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVGTHSHPHLHPHLAAHAPYLMFPPPPFG
LPIASLADSASAAAAVVAAAKSNSKNSSIADLRLKARKHAEALGL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactcacggcgttcgtgtcgaaatccttcgatcagaaaaccaaggagagcagc
aaagagagcatcacgtacagggaagttttggagagtggtttagcccgagccagagagctg
ggaaactcggagaccaaccttcaggagattactgaaacaaacaacaaccattgtccggta
catctttacaaggagcacgtagagctggaaaaggagaaattaaaggagtttagcgtgaca
agggcttctgacggaatttatgactgcaaagacaagaaggaggatgtgaaatcagaggac
gaggacgcacagagtaaactgaagcagagacggagcaggacaaattttaccttagagcag
ctgaatgaactggagcgcttgtttgatgagacgcattacccagacgccttcatgcgggag
gagttgagtcagagactggggctgtctgaggcccgcgtgcaggtatggtttcaaaacaga
agagcgaaatgccggaaacaggaaaatcaaatgcacaaaggcgttattctgggcaccgcg
agccacctggacgcgtgcagggtcgctccttacgtgaatatgggcgcactcagaatgcca
tttcaacaggttcaggctcagttgcagttggagggggtcggaacacactcccatcctcac
ctgcacccacacctcgcagcccacgctccatatctgatgttccctcctccgccctttgga
ttaccgatcgcgtcgctggcagactcggcctctgcagcggccgccgtggttgctgctgcc
aagagcaatagcaagaactccagcatcgctgacctgcgactcaaggcaagaaaacacgcc
gaggcgctgggactctga
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