KEGG   Danio rerio (zebrafish): 678600
Entry
678600            CDS       T01004                                 
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
  KO
K07928  Ras-related protein Rab-40
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    678600 (rab40c)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:dre04031]
    678600 (rab40c)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Target recognizing subunit
     678600 (rab40c)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    678600 (rab40c)
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf MMR_HSR1
Other DBs
NCBI-GeneID: 678600
NCBI-ProteinID: NP_001035438
ZFIN: ZDB-GENE-030515-1
Ensembl: ENSDARG00000061208
UniProt: Q1RLP4
LinkDB
Position
3:complement(26751861..26787196)
AA seq 279 aa
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANAAGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq 840 nt   +upstreamnt  +downstreamnt
atgggcacccagggaagccctgtgaagagctacgactacctgctcaagttcctcctggtc
ggagacagcgacgtgggcaagggagagatcctggatagccttcaagacggatctgctgag
tctccatatgcctacagcagcggaatcgactacaagacaaccacgatcctgttggatgga
cggagagttaaactagagctttgggacacttcgggacaaggcaggttttgcaccattttc
aggtcgtactccaggggagcgcaggggatcttgttggtgtatgacatcaccaaccgctgg
tcatttgatgggatagaccgctggatcagggagattgatgagcatgcacctggagtgccc
cgtattctagtgggtaaccggctacacctggcgttcaagcgacaggttcccacagaacag
gcacgggcatacgcagaaaagaatggcatgacattttttgaagtgagtcctctctgcaac
ttcaacgtcatcgagtcctttacagagctctcgcgcatcgtcctgatgaggcatgggatg
gagaagttctggaggcccaacagagtattcagtctgcaggacttgtgctgccgtgccatt
gtttcctgcacccctgtgcacctaatcgataagctgccacttcctgtggccatcaagagc
catttgaagtcattctccatggcgaacggcatgaatgctgtcatgatgcacggccgctcg
tattcgctggccaatgccgccggaggcagcaaaggtaacagtcttaaacgctccaaatcc
atccggccgccacaaagtccaccacagaactgcaccaggaacaactgtaagatctcctag

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