Danio rerio (zebrafish): 735292
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Entry
735292 CDS
T01004
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
735292 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dre01001
]
735292 (limk1a)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
735292 (limk1a)
Protein kinases [BR:
dre01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
735292 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
PDZ_2
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
735292
NCBI-ProteinID:
NP_001036156
ZFIN:
ZDB-GENE-061212-3
Ensembl:
ENSDARG00000103467
UniProt:
Q0PWB7
LinkDB
All DBs
Position
15:complement(251588..286989)
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AA seq
648 aa
AA seq
DB search
MRLMLLCCTWKDERMGEEEAGVGLPVCSGCGQQIYDDQYLQALSSDWHTLCCRCCECGSS
LSHWYYEKDGRLFCKKDYWAKFGELCHGCSEPISTGLIMVAGEQKYHPECFSCLSCGAFI
GDGDTYALVERSKLYSGHCYYRSIVTPVSLPDSPCSRIPHTVTLVSIPASTDGKRGFSVS
IDQASSPNGYSPEHKRTVRVSQVYPDCISPDVKNSIHVGDRILEINGTPIQNVPLDEIDL
LIQETSRLLQLTIEHDPHDQGPSVDHVDGGPSPSGGPSPITRPPSQDISNLRSRIITRSY
SIDKSPSSSSAPSPLSLRKDIGRSESLRGVSNRTHRIFRASDLIHGEVLGTGCFGQAIKV
THRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLDHPNVLKFIGVLYKDKRLNFIAEYI
KGGTLRDIIKNMDSNYPWGQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKSVVV
ADFGLSRLMVEDRSVERRKADRRKRYTVVGNPYWMAPEMIHGKSYDEKVDLFSFGIMLCE
IIGRVNADPDYLPRALDFGLNTAVFLEEHCPADCPAAFFPIAALCCDLDAEKRPAFTKLE
SWLEDLKMHLELGLHLVSELELLHQDFMQKHTSGGGKNSLHTHPEQPE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaatgctgctctgctgcacctggaaggacgaacgcatgggagaggaggaagct
ggtgtggggttgccggtgtgttcgggatgtggacagcagatctacgatgatcagtatcta
caggcgctcagcagcgactggcacacgctctgcttcaggtgctgtgagtgtggatcgtct
ctctcgcactggtactatgagaaggacggacggctcttctgtaagaaggactactgggct
aaattcggggagctgtgccacggctgctctgagccaatcagcaccggcctcatcatggtc
gctggagaacagaagtatcacccagagtgcttcagctgtctgagctgtggagcgttcatc
ggtgacggagacacgtacgctctggtggagagatccaaactgtactgtggccactgttat
taccgcagcatcgtgactccggtcagcctgcccgactcgccctgctccaggattcctcac
accgtcacactcgtctccattcctgcatccaccgacggcaagagaggattctccgtgtcc
atcgatcaggcctccagtcccaacggatacagccctgaacacaaacgcaccgtcagagtc
tcacaggtgtacccagactgcatcagtccggatgtcaaaaactctattcatgttggcgat
cgcatcctggagatcaatggaacgccaatccagaacgttcctctggacgagatcgatctg
ctgatccaggagaccagtcgtctgctgcagttgaccatagagcacgatccccatgatcac
ggcccgtctgtggatcatgtggatgggggtccgtcaccttctggaggcccgagcccaatc
acacgtccacccagccaggatatcagcaacctgcgctctcgcatcattacgcgcagctac
agcatcgacaagtccccaagctccagcagtgctccgtctcctctgtctctgaggaaggac
atcggccgctctgagtctctgcgcggggtctccaaccgcacacaccgcatattcagagcc
tccgacctgatccatggagaggtgctgggcacaggctgcttcggacaagccatcaaggtg
acgcacagagagactggtgaggtgatggtgatgaaggagctcatccgctttgatgaggag
acacagaggactttcctcaaagaggtgaaggtgatgcgctgtctggatcatcctaatgtg
ctgaagttcatcggtgtcctctacaaagacaagaggctgaacttcatcgcggagtacatc
aaaggaggaacactgagagacatcatcaagaacatggacagtaattacccgtgggggcag
agagtgagctttgctaaggacatcgcctctgggatggcgtatctgcactccatgaacatc
atccatcgagacctgaactcacacaactgtctggtcagagagaataagagtgtggtggtg
gcagacttcgggctgtcgcggctgatggtggaggaccgcagtgtggagcgcaggaaagca
gaccgcaggaagaggtacacggtggtgggaaacccctactggatggccccggagatgatc
cacgggaagagctacgatgagaaggtggacctcttctccttcggcatcatgctgtgtgag
atcatcggccgggtgaacgctgacccggattatctgccgcgggcgctggactttgggctg
aacaccgctgtgtttctggaggagcactgtcctgctgactgccctgctgcattcttccct
atagcggcgctctgctgcgacctggacgccgagaaacggcctgcgttcaccaagctggag
tcgtggctggaggacctgaagatgcacctggagctgggtctgcatctggtgtcggagctg
gagctgctccatcaggacttcatgcagaaacacaccagcggcggcgggaaaaacagcctg
cacacacaccccgagcagcccgagtag
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