Danio rerio (zebrafish): 767745
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Entry
767745 CDS
T01004
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a precursor
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04020
Calcium signaling pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
767745 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
767745 (grin1a)
04082 Neuroactive ligand signaling
767745 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
767745 (grin1a)
Ion channels [BR:
dre04040
]
Ligand-gated channels
Glutamate (ionotropic)
767745 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
767745
NCBI-ProteinID:
NP_001070182
ZFIN:
ZDB-GENE-051202-1
Ensembl:
ENSDARG00000027828
UniProt:
F1R366
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All DBs
Position
21:11468601..11501324
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AA seq
901 aa
AA seq
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MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTTLEGTCKEEYTPNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLALTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYPPTDITGQLNLSDPSVSTV
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggccgcgttgttctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacatcggggctgtcctgagccagaagcggtacgagcaggtgtttaaa
gatgccgtcacccaggcgaaccaggtgtacggacgagataaattcaagttgacagccatc
tctgtcactcacaaagccaacgcgattcagatggcgctgtctgtctgcgaggatctcatt
tccagtcaggtgtacgcgatcctggtgagccatccaccccagtctaatgatcatctgacg
cccactccggtctcctacaccgctggcttctaccgcatccccgtcgtggggctcaccacc
aggatgtccatttattcagacaagagcattcacctctcgttcttgcgcacagtgccacca
tattcccaccaggcacacgtatggttcgacatgatgcgagagtttcgctggaatcacatc
atcctaatagtcagtgatgaccacgaaggcagagcagcgcagaaaagactagaaaccctt
ctggaggagagagaaaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tatgacaacaagagaggacctaaggccgagaaagtgcttcagttcaaccaggagactaac
ttaactgccctgctcctggaggccaaagagttggaggccagagtgatcattctctctgcc
agcgaggaagatgcagccgccgtgtacaaaacagcacgcttcctcaacatgacaggctca
ggctatgtttggctggtcggggagcgtgagatgtccggtaaagctttgagcgaggcccct
gatgggctgattggcctccagctcatcaacggcaagaatgagtcggcacacatcagcgat
gctgttgctgttgtagcccagtccatccaagagctcttcgagaaagaaaacatcacagaa
cctccaaggggttgcgttggcaatactaacatctggaagactggtccactctttaaaaga
gtattgatgtcttccaagtacccagagggcctaacaggacgcgttgagttcaatgatgac
ggcgacagaaagtatgctcattacagcatcctcaactaccagaagagcagactgattcaa
gttggcatttacaacggaacacaagtggtgatgaataaacaaaggaagatcatttggcct
ggcggtgaaacagagagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtgtatgtgaagccaactacgctggaagggacctgcaaggaa
gagtacacacccaatggagtcttaattaaaaaggtgatctgcactggaccgaatgagacc
atcccaggacgcccaattgtaccccaatgttgctacggattttgcattgaccttctgatc
aagttggctttaactatgaactttacctatgaagtacacctggtggcagatggaaaattc
gggacgcaggaaagagttaataacagtaacaagaaggagtggaatggtatgatgggtgag
ctcctgggtggccttgctgacatgatcgttgctcccttgacgatcaacaatgaacgagcc
cagtacatagaattttccaagcctttcaaataccagggactcactatccttgtgaaaaag
gaaattcctcgcagtacgctggactcgttcatgcagccttttcaaagcaccttgtggcta
ctggtgggtctgtcggtacatgtggtggcggtgatgctttacctattagaccggttcagc
ccatttggaaggtttaaagtaaacagcgaagaagaagaagaagatgccctcaccttatct
tcagctatgtggttttcttggggtgtcttgttgaactctggaattggagaaggtgcccca
cgtagtttttcagcaagaatattaggaatggtgtgggctggcttcgctatgattatagta
gcatcctatactgccaacctggctgccttcctagtgttggaccggcctgaggagcgcatc
accggcatcaacgacccaaggctgaggaacccatcagacaaattcatctatgccacagtg
aagcagagttcggtggatatttacttccggcgacaagttgagctgagcaccatgtaccgc
cacatggagaagcacaactacgagagcgccgctgaagccatccaggccgttcgggacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggctattctcagttcccatgagaatggcttc
atggaggacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgagaatatggcaggggtcttcatgctagttgctggaggcatt
gcagcaggaatattcctcatctttatcgagattgcatataagcgccataaagacgcccgc
aggaagcagatgcagctagcctttgcggccgtcaatgtctggaggaagaacctacagcaa
tacccacccacagacattacgggccagctcaacttgtcggacccgtctgtcagcacggtg
gtgtga
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