KEGG   Danio rerio (zebrafish): 777754
Entry
777754            CDS       T01004                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a
  KO
K15361  WD repeat-containing protein 48
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    777754 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    777754 (wdr48a)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     777754 (wdr48a)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_Vps41 WD_LRWD1 WDR54 WD40_RFWD3 RAWUL Beta-prop_NUP159_NUP214 WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 777754
NCBI-ProteinID: NP_001410724
ZFIN: ZDB-GENE-061110-55
UniProt: A0AB13A9S1
LinkDB
Position
24:complement(40876247..40901425)
AA seq 678 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPHNAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PMDEETELNHSSVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDSESQTGGSAAEKPSSEQKEDEEMAVQAEEKIELLCQDQVLDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatatgtg
atcagagatgaggtggagaaatataatcgtaatggagtcaatgcgctacagctggatcca
gctcttaaccggctcttcacggccggacgagactccattattaggatatggagcgtcaac
cagcacaagcaggatccttacattgcatcaatggagcaccacacagactgggtgaatgac
atcgtcctctgctgcaatggaaagacgttgatctcagcatcgtcagacactacagtgaag
gtctggaatgcacataagggcttctgtatgtccacactgcgaacgcacaaggactatgtt
aaagcattagcgtatgctaaagacaaagagctggtggcttcagcagggctggacagacaa
atcttcctctgggatgtgaacacactgacagcgctgaccgcatccaacaacaccgtcact
acatcttctctcagcggaaacaaggactctatctacagtttggccatgaatcagatgggg
acggttatagtttcgggatccactgaaaaggttttaagagtgtgggatccacgaacctgt
gccaaactcatgaaactgaagggacacacagacaacgtcaaatctctgctgctcaacaga
gacggcactcagtgtctgtcaggcagttcagacgggacgatccggctctggtctttgggt
cagcagcggtgcatcgccacgtatcgcgtccatgatgaaggtgtgtgggctctgcaggtc
aacgaggccttcacacacgtttactccggcggacgcgaccgcaagatatactgcactgac
ttgcgcaatcctgacatacgggtgctcatctgtgaagagaaggcaccggtgctaaagatg
gagctggaccggtcagcagatccacacaacgccatctgggtttccaccaccaagtccaca
gtgaacaaatggtctctgaagggtatccataatttccgagcgtctggagattacgataat
gactgcagtgctccgctgacgccactctgcacacagcctgagcaggtcatcaaaggtggc
gccagtataattcagtgccacattctgaatgacaagagacacattctgaccaaagacacc
aataataatgtggcgtactgggatgtgctgaaggcctgtaaagttgaagatctgggcaag
atggagtttgatgaggagatcaagaagcgcttcaagatggtttatgtgcccaactggttt
tcagtggacctgaagactgggatgttgactataacgctggacgagagcgactgttttgca
gcctgggtttctgctaaagacgctggattcagcagccctgacggatccgaccccaaactg
aatctcggtgggctgctgcttcaggctctgctggagttttggccacgcacacacataaac
cctatggatgaggagaccgaactcaaccacagcagcgtgaacggtgaacatgagagtcga
atacagaagggaaacggatatttccaggttcctccacacactccggtgatatttggtgaa
gcaggaggaaggacattattcagattgttgtgtcgagactctggtggagaaacagagtct
atgctgctgaatgagacggtgccgcagtgggtcatcgacatcactgtagacaaaaacatg
cccaaattcaacaaaatcccgttctacctccagccacattcatcctccggagcgaagaca
ctgaagaaggaccgtctgtcagcgagtgatatgctgcaggtgaggaaggtgatggagcac
gtgtatgagaagatcattaatctggacagcgagtctcagactggaggatcagcagcagaa
aagcccagcagcgagcagaaggaggacgaggagatggcggtgcaggccgaggagaagatc
gagctgctctgccaggatcaggttttggacccaaacatggacctgcgaacagtgaagcac
ttcatctggaagagcggcggcgacctgacgcttcactaccggcagaaatcaacgtga

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