Danio rerio (zebrafish): 777756
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Entry
777756 CDS
T01004
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
777756 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
777756 (nup98)
03036 Chromosome and associated proteins [BR:
dre03036
]
777756 (nup98)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
777756 (nup98)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
777756 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
777756
NCBI-ProteinID:
NP_956979
ZFIN:
ZDB-GENE-040426-1180
Ensembl:
ENSDARG00000074955
UniProt:
E7F981
LinkDB
All DBs
Position
21:complement(43617906..43662199)
Genome browser
AA seq
1814 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQPNSGFGATPGGFGSSAFGTTNNTGGLFGNTQNKPG
GLFGSSTFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQQNNAFGANKPAAFG
NFGTSTSSGGLFGTTNTASNPFGGTSGSLFGSSSFTAAPPGTTIKFNPPTGSDTMVKGGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNLPMAAGTGGLFGAAAPATPST
GTGLFGSSAPNTGFNFGQNKTTFGTSTGAFGTTTGSLFAQPQQQQQQQQQNSSLFKPFGS
ATTTQNNTFSFGNTSSMVSSSWCTKGLFANTAASQAGGLFGNTNTSTATGFGTGIFGQTN
TGFGNVGTQNLFGNKPAGFGTTTTSAPSFGSGPGLFANKPTLTLGTNTNTSTFGFSGTGA
GGGLFGNKTAATGLGPVLGAGFGAGVGTGQTSLFGNNQKLGSTLGSVGTFGAGGFNTGAS
TLNFGAPQQPIALTDPSAGAAQQAVLQQQISALAYSPFGDSPLFRNPLSDPKKKEERLKP
TNPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDELSLNNGAFMPRK
SIKKLVLKNLNNSSLYNNSLNREADDLASPSEYPQNGLSLSLDEGEPREANMERRGEDDL
EVSKFYTNPITKPIPHAQLSPLLQDTISEFNMRGSGSHRNGLEASSEDLSLAEDSIQEER
DEELEAQKPPHPAGIVLSRVGYYTIPSMEELGKMLNENGECIVENFTIGRKGYGSVFFPG
EVNLTNMILDEIVHFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCCQIKS
PDRLTEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEISPAKL
DLKKLKTAVPPGLAQLPLTQQQGAPQAQSTAVLELLSRVSELDSDMADITQEHPVESILD
DEDGERTSFEENKLRSETPAENEPVSASSQIASSMGINPHTLQIMKASLFADDDECDMFQ
EHVSSKLIQDVASTKLLLSGAGRPSIGALLQNKFTSGGGLFSQLPEVPFSGISQKLNKSL
ASEAAWPSLGPSFLLPPPPPEPTLRTVGARRLGGPVPLEASITLGKGRLLMDAALFRGRS
FRVGWGPNWTLVHSGDQLSVTHPVKEPAAENLGFGFLPKPTKTKPITESPFKVRVEQVVG
LEPKQSSESLSLYLRPLEIGLKHSTINTEEPCPFIQPAGGVDALHGYAEWIVEVNKDIGG
SDAGLAHWKQVWTLCAALWGRLGDRDLDTEQYSDYQQQLERRRSFSHWLSDCAANCIEEE
VGRALQRSHAEAVFSYLTGHCISKACKLSQKSGDHRLSLMLSQAVGSQFCRDLLALQLTD
WNRMQTDSFIEEERLRIFALLAGKPVWQSTDCCINVCSELDWKRCVAVHLWYMLPPTASV
ADALTKYETAFQGSEEVKRYAGPPLPPYIDELELLGLDEDMDEIDSKKPLYDICFHLLKL
YSDRHYSLQQLLDPSTVTADHLDYRLSWHLWSVLQALNYNHLATSCQGLLHASYAAQLES
AGLWEMAIFVLLHITDSGRRESAVREMLSLHCSLEETEESMEKEQFLTEKLLIPIQWIHQ
AKAIRACREGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLDFLEGLAVPE
RSVQIQGWDTSGRVFLDYIHVIQTLQDIQQMESPGYELERLHTEVTSLCNRIVLLPCSKA
KDKLAQSEMAKRVANILRVVLSLQQGGEGTPDSQYIPLCQLASHIGRLPMPEDYALEELR
SLTNSYMQEYVISH
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgctccctttgggggaggtacaggaggatttgggacgtca
tcaacttttgggcaaccgaattccgggtttggtgcaacaccagggggctttggatcttca
gcatttgggacaacaaacaacacaggaggactgttcgggaacacccagaacaagcctggt
ggtctctttgggtcaagcacgttcagtcagcctgttacatcctccaccagtagtggcttt
gggtttggtgccaccagcggaacatcaaacagccttttcggaagcaccaacaccggaggt
ggaggactgttttcccagcagaataatgcatttggagccaacaaaccagccgcttttggc
aattttggaacaagcaccagtagtggtggattgtttggaacaaccaacacagcatccaac
ccttttggaggaacatcaggatctttgtttgggtcatcaagtttcaccgctgcacctcct
ggcacaaccattaaattcaatccacctacagggagtgatacaatggtaaaaggaggtgtg
acaaccagcatcaacaccaaacaccagtgcatcactgccatgaaggaatatgaaaacaaa
tctttagaggaattgaggcttgaggattaccaagcaggaaggaagggtccttccaacctc
cccatggcagctggcacaggtggcctctttggagcagcagccccagctactcctagtact
ggcactggactttttggctcctctgctccaaacactggctttaacttcggccaaaacaaa
accacatttggcaccagtacaggcgcctttggtacaaccacaggaagtttgtttgcccag
ccacagcagcagcagcaacaacagcagcaaaattccagtctcttcaaaccattcggctca
gccaccaccacccaaaacaatactttctcctttggcaacaccagcagcatggtaagttcc
agttggtgcactaaagggctgtttgccaacactgctgcctctcaggctggaggactgttt
ggaaacactaacacaagtactgccactggctttggcacaggaatctttggtcagactaac
actggctttgggaatgtaggcacacagaatcttttcggtaataagcctgcaggatttggc
accaccactactagcgcaccctcttttggctcaggccctggtctttttgcaaataagcct
acgctcactcttgggactaacacaaacacctcaacgtttgggttcagtggtactggtgct
ggtggtggcctttttgggaacaaaactgctgcaacaggtcttggaccagtattgggtgct
ggctttggagcaggtgtaggaactggccagacgtcattgtttgggaacaaccagaaactg
ggctccaccttgggctcagtgggcacttttggcgctggaggctttaacactggtgccagc
acactgaattttggcgctcctcaacagcctattgctctgactgaccccagtgcaggagct
gctcagcaggctgtgctccagcagcagatcagtgcgctggcctattcgccttttggagac
tcacctctctttagaaacccactgtcagaccccaaaaagaaggaggagcgtctgaaaccc
acaaatccagctgcccagaaggccttgactacccctactcaatacaaactcacacctcgt
cctgccacccgcgtgcgccccaaagcactctcctcctcaggctcttccaaatctcagctc
tttgatgggcttgatgatgatgagctctctcttaacaacggggctttcatgcctaggaag
agcataaagaagcttgtgttgaagaatctgaacaacagcagtctgtacaacaactcatta
aaccgagaggctgatgatttggcctctccttcagagtacccacagaatgggctcagtctg
agtttggatgaaggagaacccagagaagcaaatatggagagaagaggggaggatgatctg
gaggtctcaaagttttacaccaacccaatcaccaaacccattcctcatgcccagctgagc
cccttgcttcaggacaccatctccgagtttaacatgcggggatctggcagtcatcgcaac
gggctggaggccagcagtgaagacctctctctagcagaggactccattcaggaggagaga
gatgaggagctggaggctcagaaacctcctcacccagctggtatagttcttagccgtgtt
ggctactacaccatcccttcgatggaagagctgggaaagatgctgaatgagaatggggag
tgtattgttgagaacttcaccatcggcagaaaaggctatgggtcagttttcttccctggg
gaagttaatcttaccaacatgatcctggatgagattgtacacttcagacgcaaggagata
atcgtgtaccctgatgacaaagacaagccccctgttggagagggactaaacagacgcgct
gaggtgactctagatggagtgtggcccaatgacaagacaacttgctgtcagatcaagagt
ccagataggctgactgagatgaactatgagggtcggcttgaagcagcttcacgcaaacag
ggcgcccgcttcttggagtaccggcctgaaactggctcttgggtctttgaggtggcccac
ttctcaaagtatggcttgcaggaatctgatgaagaggaggaaatttctccagctaaactc
gacctgaagaagctgaagacagcggttcctccagggcttgcgcagcttcctctgacccag
cagcagggggcgccacaggctcagagtactgcggttcttgagctcctcagccgtgtgtcg
gagttggacagtgacatggctgacattactcaagagcacccggtcgagagtattttggac
gatgaggatggcgaaagaacttctttcgaagagaacaaactgagatccgagacccctgct
gagaacgagcccgtgtctgcatccagccagatcgcttcctctatgggcatcaaccctcat
actttacagattatgaaggcctctctgtttgcagacgacgatgagtgtgacatgtttcaa
gagcatgtttcttcaaagctcattcaagatgtggcttcaaccaaacttttgctttctgga
gctggtcggccatcaattggagcccttttgcaaaacaaatttacttcaggaggaggcctc
ttttcccagttgccagaggttccttttagtggaatttctcagaagttgaacaagtcactg
gcatcagaagctgcatggccatcattgggtccatcttttcttctcccgccccctcctcca
gaacctactcttcgcactgtaggggcccgcaggcttgggggacctgtgcctctggaggcc
tctataactctaggcaaaggtcgcctgcttatggacgcggctctgttcagaggccggtct
ttcagagtgggctggggccccaactggactcttgtgcacagtggagatcaactcagtgtc
acacaccccgtgaaggagccggcagcagagaacctggggtttggattcttacccaaacca
accaaaaccaaaccgatcactgaaagtccctttaaagtgcgtgtggagcaggtggtcggt
ctggagcccaagcagtcatcagagagcctttctttgtacctcaggccactggagatcggt
ctgaagcacagcaccatcaacacagaggagccctgtcccttcatccagccagcaggagga
gtggacgctctgcatggctacgcagagtggattgtagaggtcaacaaagatattggagga
agtgatgctggcctggcgcattggaagcaagtctggactttgtgtgctgctctttggggt
cgactgggtgaccgtgacctggacactgagcaatattcagactaccagcagcagctcgag
aggcggaggagcttctcacactggctgtctgattgcgcggccaactgcatcgaggaggag
gtgggccgagcgcttcagcgcagccatgcagaggccgtattcagttacctcactggccac
tgcatcagcaaggcctgcaaattgtcccagaagagtggggaccatcggctttctctgatg
ctgtcccaggctgtgggctctcagttttgtcgtgatctgttggctctgcagctcacagac
tggaacaggatgcagacagactccttcatcgaggaggagaggctacgaatatttgctttg
cttgcaggcaaaccagtgtggcagtctacagactgttgtataaacgtgtgctcagagctg
gactggaagcggtgtgttgctgttcatctgtggtacatgctgcctcccactgcctctgta
gctgatgctctcaccaaatacgaaacagcgtttcagggttcagaggaagtgaaaaggtat
gctggccctcctttacctccgtatatagacgaactggagttgttgggtttggatgaagac
atggatgagatcgattccaaaaagccactctacgacatctgcttccacctgctcaaactt
tacagcgacaggcactacagccttcaacagctgcttgatcccagcacagtgaccgccgat
catctggactatcggctgagctggcacctctggagtgtgctgcaggctctcaactacaac
cacctggccacctcatgccagggcctgctgcatgccagctatgctgctcagctagagagt
gcgggattatgggaaatggccatctttgtgttgctgcacatcacagactctggacgtaga
gagagtgcagtaagggaaatgcttagcttacattgctccctcgaggagacggaagagtcg
atggagaaggagcagtttcttacagaaaagctgctgatccccatccagtggatccatcaa
gccaaggccatccgtgcctgcagagagggagataaacatagagaagccttgcacctttac
aaggctggccactggaaccactgccatcgactggtcatccagcacctcgcctcagactgc
atcattaacgataatcataagtacctcctggatttcctagagggtttggcagtgccagag
cgcagtgttcagattcagggctgggatacgtctggaagggtcttccttgattacatccat
gttattcaaacgctgcaagacatccagcagatggaaagcccaggttatgagctggagcga
ctgcatacagaggtgacatctctctgcaatagaatagtgcttctcccctgttccaaagct
aaagacaaacttgcccaatcagagatggccaaacgtgtggctaacatcctccgggtggtc
ctgagtctccagcagggtggtgaaggcaccccagactcccaatacatccctctttgtcag
cttgcttcacacattggacgtctgcccatgcctgaggactatgctttggaggagctgcgc
agccttactaactcatacatgcaagagtatgtgatcagtcactga
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integrated database retrieval system
