Danio rerio (zebrafish): 793939
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Entry
793939 CDS
T01004
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform 2
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
dre04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
793939 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
793939 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
793939 (mgrn1a)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
793939 (mgrn1a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
793939 (mgrn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
RNF157-like_N
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
793939
NCBI-ProteinID:
NP_001315473
ZFIN:
ZDB-GENE-030131-6192
Ensembl:
ENSDARG00000100072
UniProt:
B7ZVH3
B0JZJ6
LinkDB
All DBs
Position
12:21806596..21834244
Genome browser
AA seq
554 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSV
EFCFDTDARVAITLYCQAFEEFANGMAIYSAKSPSMVSETVHYKRGINQQFSLPSFKIDF
TKWKPEELNFDLDKGVFPLVVQAIVDDGDDVTGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKTAATLSPVSFSPVLSQSSDHTEHSNADNIP
PGYEPISLLEALNGVQPVSPSIPSAPLYEEIQFSGEMGDPLNLTGRQQNGDPGALKGKGS
KSPDGSVRSPSSPIQEEEDEERMSELSDAQPQSVLPCSLSPSEDTVEGVTAKPGLPNSGS
ESRSLGVSVSEILQDCHSERSSLSQSESDPSADLALPGSSESIESLKSQSTNSSSQPLLC
LPSSLRMEDEHLTS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaatactgagcaggaggattgctggagttgaagacatcgatattcaggccaat
tctgcgtacagatatcctccaaaatcaggaaattatttcactagccatttcttcatggga
ggagaaaagtttgacacaccccatccagagggatatctttttggagaaaacatggacttg
aatttcctaggaaacaggcctgtacagtttccctatgtaactccagcagcacatgagcct
gtgaagaccctgcggagtttggtgaatatcaggaaggattccttacggcttgtcagatat
aaggatgattctgacagcacaccagaagacacaggagatcccagggtgctttatagtgtt
gaattctgctttgatactgatgccagagtggcgattacattatactgtcaagcctttgag
gagtttgccaacggaatggcaatatacagtgccaagagcccttcaatggtgtcagagacg
gtccattataagagggggataaatcagcaattttctctgccatccttcaaaattgatttc
accaaatggaagcctgaagagctgaacttcgatctggacaaaggagtttttcctttggtg
gtccaagcaatagtggatgatggagatgatgtcactgggcatgcacacgttctcttggca
gcatttgaaaggcatgttgatggcagtttctcagtgaagcctttgaaacagaagcaaatt
gtggaccgtgtgagttatctgctgcaggagatttacggcattgaaaaccggaacaaccag
gagacaaagtccacagaggatgagaacagtgacaacagcagcgagtgtgtggtttgttta
tcagacctgcgtgacacactcattcttccctgcaggcacctgtgtctgtgcaatgcctgc
gccgacacactgcgttaccaggccaacaactgcccgatctgtcgactcccattcagagcc
ctgctccagatccgagcagtgaggaagaaaacagccgccactctctccccggtgtccttc
agtccagtgctgtcccagagctctgaccatactgagcattcgaatgcagacaacattcct
cctggctatgagcccatctccctgctggaggccctcaacggtgtgcaacccgtgtctcct
tcaatcccatcagcccctctatatgaggagatccagttttcgggagagatgggagatcct
ctcaacctgaccggccggcaacagaatggagatcctggagctctgaagggcaaaggtagc
aagtcacctgatgggtctgtacgttctccctcgtcccccattcaggaggaggaagacgag
gagaggctgtcggagctctctgatgcacagccgcaatctgttttgccctgtagtctcagt
ccctctgaggacacagtagagggtgtgactgccaaacctggcttaccaaattcaggttcc
gagagccgatcgctgggtgtgtctgtgagtgaaatcctccaggactgtcacagtgagcgc
agcagcctgagccagtcagaaagtgacccctctgcagatctggccctgcctgggtcatca
gagtccatagagagcctgaagagtcagagcaccaacagctccagtcagcctctgctctgc
ctccccagcagcctgcgcatggaggatgaacacctcacatcataa
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