Danio rerio (zebrafish): 793952
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Entry
793952 CDS
T01004
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04517
IgSF CAM signaling
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
793952 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
793952 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
793952 (rapgef2a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
793952
NCBI-ProteinID:
XP_005170987
ZFIN:
ZDB-GENE-090313-280
Ensembl:
ENSDARG00000061459
UniProt:
A0A8M9PTA4
A0A8M2BIN3
LinkDB
All DBs
Position
1:complement(22700556..22766836)
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AA seq
1486 aa
AA seq
DB search
MHADRMASYVDNSFRHAIMKIPADRTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRY
EQHDANEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEAS
EMIVVDYMDDNDEYFQRQASHRQSRRRFRKINQRGERQTIIDTVDNYPVSKPPLPPGYHS
ECPKSQLPTDFSKLHPSDSCHSHMTSSQSRSSIASDSGSSSLSDIYQATESECGDMDLSG
LPETAVDSDEDDDDEDVGRGTDHLMSRDIVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFA
SLSVSVRRELCAVMVFAVVERAGTIVLNHGEELDSWSVILNGAVEVIYLDGRSESVCMGG
SFGVCPSMEKQLMTGVMRTKVDDCQFVCIAQQDYCCILNQVEQNTQRVEEEGEIVMVKEH
RELDRTGTRKGHIVVKGTAERLMQHLVEDHSIVDPTYIEDFLLTYRTFLPSPLILGQRLL
DWFNDPCLRDKVTRVVLLWVNNHFSDFEGDPDMTSFLEEFQSNLEREKMTGQLRLLNIAC
AAKAKPRVITVTRTAREIPLPFTLIGGAERGTRLFISSVEVGSKAEEAGLKRGDQILEVN
GQTFENVQLSKATEILRNNIQLSMSVKTNLLVFKELVARVAEERKNGVPHLPKIGDGKKN
CRYSIPELGAGSDVIGQEKISKKAKAHTVGGRNKLMKILDKTRMSILPQKPYSDLGLGQT
QDDSIVGLRQNKQTPPTMPVSGTLSSSNPDLAQGQQRIIDYSTQPPAPGFTQLQDQVLRI
FKADQQSRYLLANRDTTAREAANLAIKEFGLSASPEAFSLCEVSVTQEGVIKQRRLPDQL
SKLADRIQLSARYYLKSNMETETLCSDVEALEMQRESVVPLLSLSSMEIANQLSARNYLL
FSCIEPTDYINDLFKLHPQEPPTNLRNFEGLVNQETFWVATEIVQETNLAKRVKIIKHFI
KIALHCRDCKNFNSMFAIISGFNLAPVSRLRSTWERLPGKYEKLLAELQDVFDPSRNMAK
YRNLLNKHNLQPPVIPLFPVIKKDLTFLHEGNNSEVDGLVNFEKLRMIAREIRHVVRMAS
ITMDPALLFKTRKKKWRSLGSLSQVSSSSLSDIGTMGGKRKGRRSSFLSAKKLYEVEMMS
RRVRQYLDTHSNECNEDTLHELSMTCEPANSSTLKHAGERRRIDASPAGQRSASPQQTNG
NHGRKKSISKELPFEGRDRQRKLPEDSQSSTSSLLSSPRNSPQSTPRKGPQLVVSEVSDQ
MSLLSSSSSELLMVDDHTHTQPHSLAHPLSARRAEPDQLSLGSYSLTQDQCDRASLDAAD
SGRGSWTSCSSGSHDNIQSIPQRVGYYDSRSWEMLSDGMGRSHMTTPTGYWADELEGDTG
TIKRRGGKDETPNTNKNTVSRREGHFREPPPTPPGYTAVSLAEADTNSHAHGRRPPDYSA
ALQRSRFLKRTCDPPPLHSSSRLPPYSHCQTPRRSQADESEQISAV
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggacagaatggcgtcatatgtggacaatagttttcggcacgcgatcatgaag
atcccagccgacaggacgcaacaggatctgcagattgtgtactcataccttcatggcatg
gaagctctgtccaacctgagggaacaccagctcaggctgatgtgtgagacggttcgatat
gaacagcatgatgctaatgaggttttatactatcctgatgacatcgggacctgctggtat
atccttctgtctggctcggtcttcataaaggagtctatgtttctgccccgcagcagtttt
ggtaagcgttctgctggtagtttgcgtcgtggttgtgagtgtatcgtccttgaggcttca
gaaatgattgtggtggactacatggatgacaatgacgagtatttccaaagacaagcatct
catcgacaatccaggagaaggtttcgaaagataaaccagcgtggagagcgccagaccatt
attgataccgttgataattatccagtcagcaagccgcctctgccacctggataccactct
gaatgccccaaatcccagctcccaaccgacttctcaaagcttcacccctccgacagttgc
cactctcatatgacttccagccaatcacgttccagcatcgccagtgattcaggaagcagc
agcctatcggatatttaccaggccactgagagcgagtgtggagacatggatctaagtggg
cttcctgaaacagcagtggactcagacgaggatgatgatgatgaagacgtaggaagggga
acggaccatcttatgagtcgggatattgtgagagactgccttgaaaaagaccctatggac
cgtacagatgatgacattgagcaattgctggagtttgttcagcagcttccagcatttgcc
agtctgagtgtttcggtgcgaagggaactctgtgctgttatggtgtttgcggttgtggaa
cgtgctggaactatagtcctaaaccatggtgaagagctggactcatggtcagtcattctg
aatggagcagtagaggtgatatacctggacggccgcagtgagagtgtgtgtatgggtgga
agttttggtgtctgcccatcaatggagaaacaactgatgactggagtaatgagaaccaaa
gttgatgactgtcagtttgtgtgcattgcccagcaggactattgctgcattctgaatcag
gttgagcagaacacacagcgagtagaggaggaaggggaaatcgtcatggtcaaagaacat
cgagaactcgacaggacgggcacacgcaagggacacattgttgtcaagggtactgctgag
aggctgatgcagcacttagtggaggaccattcaatcgtcgaccccacatatattgaggac
tttctcttaacctatcgtaccttcctgcccagtcctctgattctgggacagagacttcta
gactggtttaatgacccctgtttacgggacaaggtaacccgggttgtgctcttatgggtt
aacaatcattttagtgattttgaaggagaccctgacatgaccagttttttggaggagttt
caaagcaacctggaaagagagaaaatgaccggtcagttgaggttgctcaacatcgcttgt
gcagcaaaagccaaacccagagtgataactgtaaccaggacagctcgagagatccccctc
ccctttacccttattggaggagctgaacgggggacacgcctcttcatcagcagtgtggag
gttggcagcaaagcagaggaggcagggcttaagcgtggagaccagatattggaggtgaac
ggacagacgtttgagaatgtgcagttgtcgaaagcgactgaaattctcaggaacaacata
cagctctctatgagtgtcaaaaccaacctacttgtcttcaaggagttggtggcaagggtg
gccgaggaaaggaaaaacggcgttcctcatcttccaaagattggtgacggaaagaaaaac
tgtcgatattctatacctgaacttggggctggttctgatgttataggtcaagaaaaaatc
agcaagaaggcaaaagcacatacagtgggtggccgaaacaaactgatgaagattctagac
aagacacgcatgagcatcctacctcagaaaccttacagtgacctcgggttggggcagact
caggatgacagcattgtgggattacggcagaacaaacagactccacccactatgccagtg
agcggaactctctcatccagtaaccctgacctggcacaaggccagcaacgcatcatcgac
tacagtacacagccaccagcacctggattcactcagttgcaagaccaggtgctgcgcatt
ttcaaggcagatcagcaaagccgttacttactggccaatagagacaccacagccagagaa
gctgccaatctagccataaaagagtttggcttgtctgcgagtcccgaagctttttcgctc
tgtgaagtttcagtcacacaggaaggagttatcaagcagagacgactgcctgatcaactg
tccaaactggctgacaggatccaactgagtgccaggtactatctaaagagcaatatggaa
accgagacgctgtgttcggatgtggaagcactggagatgcagagagaatctgtggtgccc
ctgttgtctttgagctcaatggagatagccaatcagctttcagcacgcaactatctgctc
ttctcctgcatcgaaccgacagattacatcaatgacctctttaagcttcacccacaagag
cctcccacaaacctgcgcaactttgagggtctggtgaaccaggagactttctgggtcgcc
acagagattgttcaggaaaccaacctggccaaaagagtgaagatcatcaagcactttatt
aagattgctcttcactgccgcgactgcaagaacttcaactctatgttcgccattatcagt
gggttcaatctggctcctgtctctcggttgcgatctacatgggaacggttgcctggaaaa
tacgagaagcttttggctgaattacaggatgtttttgacccttctcgcaacatggccaaa
tatcgcaaccttttgaacaaacacaaccttcagccgccggtgatccctctgttccccgtc
atcaagaaagacctcaccttccttcatgagggcaacaactcagaggtggacggtctggtg
aattttgagaagttgaggatgatcgcacgagagatcagacacgtggttcgaatggcttcc
atcaccatggaccctgcattgctttttaagactaggaagaaaaagtggaggagtcttgga
tctctaagtcaggtgagcagctcttctctgtctgacattggaacgatgggtggaaagaga
aagggcaggcggagctctttcctcagtgctaagaaactgtatgaggtggagatgatgagc
agacgtgtgcgccagtatctggacacgcactcaaacgagtgcaacgaggacacacttcat
gagctctccatgacctgtgagcctgccaacagctccacactgaagcacgctggtgagagg
agacggattgatgcatctcctgctggtcagagaagtgccagtcctcaacaaacgaatgga
aatcatggtcgcaagaagtcaattagcaaagagttaccattcgagggccgagacagacaa
cgaaagctcccagaggacagccaatcaagcacttcatctctcctctcctctccacgtaat
tcacctcagagcacacctagaaaaggcccacagttagtggtaagcgaggtatcagatcag
atgagtctgttaagctcctcttcctccgaactcctcatggttgatgaccacacacacact
cagccccattcacttgcacatccactcagtgcacgcagggctgagccagatcaattaagc
ctggggtcctactccttgactcaggatcagtgtgaccgcgcatcactggacgcagcagac
agcggtcgtggcagctggacatcctgctcgagtggatcccatgacaatatccaaagtatt
cctcagcgtgtgggatattatgacagccgcagctgggagatgctgtcagacgggatgggg
cgaagtcacatgaccactcccaccggctactgggctgatgaactggaaggagacacagga
acgataaaacgcagaggtggaaaagacgaaactccgaacacaaacaagaacaccgtgagt
aggagggaggggcatttcagagagccgccgcccacaccaccgggttacactgctgtctca
ttggctgaggcagacaccaacagtcatgctcatgggcgacgcccaccagactacagcgcg
gctctgcagagatctcgattccttaaaaggacatgcgatcctcctccattgcactcgtcc
agcagattaccaccgtacagccactgccagactccacgacgatcacaagcagatgaaagc
gaacaaatatctgcagtttaa
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integrated database retrieval system
