Danio rerio (zebrafish): 793952
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Entry
793952 CDS
T01004
Symbol
si:dkey-253i9.4
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
793952 (si:dkey-253i9.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
793952 (si:dkey-253i9.4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
793952
NCBI-ProteinID:
XP_005170987
ZFIN:
ZDB-GENE-090313-280
Ensembl:
ENSDARG00000061459
UniProt:
A0A8M9PTA4
A0A8M2BIN3
LinkDB
All DBs
Position
1:complement(21138426..21204717)
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AA seq
1486 aa
AA seq
DB search
MHADRMASYVDNSFRHAIMKIPADRTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRY
EQHDANEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEAS
EMIVVDYMDDNDEYFQRQASHRQSRRRFRKINQRGERQTIIDTVDNYPVSKPPLPPGYHS
ECPKSQLPTDFSKLHPSDSCHSHMTSSQSRSSIASDSGSSSLSDIYQATESECGDMDLSG
LPETAVDSDEDDDDEDVGRGTDHLMSRDIVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFA
SLSVSVRRELCAVMVFAVVERAGTIVLNHGEELDSWSVILNGAVEVIYLDGRSESVCMGG
SFGVCPSMEKQLMIGVMRTKVDDCQFVCIAQQDYCCILNQVEQNTQRVEEEGEIVMVKEH
RELDRTGTRKGHIVVKGTAERLMQHLVEDHSIVDPTYIEDFLLTYRTFLPSPLILGQRLL
DWFNDPCLRDRVTRVVLLWVNNHFSDFEGDPDMTSFLEEFQSNLEREKMTGQLRLLNIAC
AAKAKPRVITVTRTAREIPLPFTLIGGAERGTRLFISSVEVGSKAEEAGLKRGDQILEVN
GQTFENVQLSKATEILRNNIQLSMSVKTNLLVFKELVARVAEERKNGVPHLPKIGDGKKN
CRYSIPELGAGSDVIGQEKISKKAKAHTVGGRNKLMKILDKTRMSILPQKPYSDLGLGQT
QDDSIVGLRQNKQTPPTMPVSGTLSSSNPDLAQGQQRIIDYSTQPPAPGFTQLQDQVLRI
FKADQQSRYLLANRDTTAREAANLAIKEFGLSASPEAFSLCEVSVTQEGVIKQRRLPDQL
SKLADRIQLSARYYLKSNMETETLCSDVEALEMQRESVVPLLSLSSMEIANQLSARNYLL
FSCIEPTDYINDLFKLHPQEPPTNLRNFEGLVNQETFWVATEIVQETNLAKRVKIIKHFI
KIALHCRDCKNFNSMFAIISGFNLAPVSRLRSTWERLPGKYEKLLAELQDVFDPSRNMAK
YRNLLNKHNLQPPVIPLFPVIKKDLTFLHEGNNSEVDGLVNFEKLRMIAREIRHVVRMAS
ITMDPALLFKTRKKKWRSLGSLSQVSSSSLSDIGTMGGKRKGRRSSFLSAKKLYEVEMMS
RRVRQYLDTHSNESNEDTLHELSMTCEPANSSTLKHAGERRRIDASPAGQRSASPQQTNG
NHGRKKSISKELPFEGRDRQRKLPEDSQSSTSSILSSPRNSPQSTPRKGPQLVVSEVSDQ
MSLLSSSSSELLMVDDHTHTQPHSLAHPLSARRAEPDQLSLGSYSLTQDQCDRASLDAAD
SGRGSWTSCSSGSHDNIQSIPQRVGYYDSRSWEMLSDGMGRSHMTTPTGYWADELEGDTG
TIKRRGGKDETPNTNKNTVSRREGHFREPPPTPPGYTAVSLAEADTNSHAHGRRPPDYSA
ALQRSRFLKRTCDPPPLHSSSRLPPYSHCQTPRRSQADESEQISAV
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggacagaatggcgtcatatgtggacaatagttttcggcacgcgatcatgaag
atcccagccgacaggacgcaacaggatctgcagattgtgtactcataccttcatggcatg
gaagctctgtccaacctgagggaacaccagctcaggctgatgtgtgagacggttcgatat
gaacagcatgatgctaatgaggttttatactatcctgatgacatcgggacctgctggtat
atccttctgtctggctcggtcttcataaaggagtctatgtttctgccccgcagcagtttt
ggtaagcgttctgctggtagtttgcgtcgtggttgtgagtgtatcgtccttgaggcttca
gaaatgattgtggtggactacatggatgacaatgacgagtatttccaaagacaagcatct
catcgacaatccaggagaaggtttcgaaagataaaccagcgtggagagcgccagaccata
attgataccgttgataattatccagtcagcaagccgcctctgccacctggataccactct
gaatgccccaaatcccagctcccaaccgacttctcaaagcttcacccctccgacagttgc
cactctcatatgacttccagccaatcacgttccagcatcgccagtgattcaggaagcagc
agcctatcggatatttaccaggccactgagagcgagtgtggagacatggatctgagtggg
cttcctgaaacagcagtggactcagacgaggatgatgatgatgaagacgtaggaagggga
acggaccatcttatgagtcgggatattgtgagagactgccttgaaaaagaccctatggac
cgtacagatgatgacattgagcaattgctggagtttgttcagcagcttccagcatttgcc
agtctgagtgtttcggtgcgaagggaactctgtgctgttatggtgtttgcggttgtggaa
cgtgctggaactatagtccttaaccatggtgaagagctggactcatggtcagtcattctg
aatggagcagtagaggtgatatacctggacggccgcagtgagagtgtgtgtatgggtgga
agttttggtgtctgcccatcaatggagaaacaactgatgattggagtaatgagaaccaaa
gttgatgactgtcagtttgtgtgcattgcccagcaggactattgctgcattctgaatcag
gttgagcagaacacacagcgagtagaggaggaaggggaaatcgtcatggtcaaagaacat
cgagaactcgacaggacgggcacacgcaagggacacattgttgtcaagggtactgctgag
aggctgatgcagcacttggtggaggaccattcaatcgtcgaccccacatatattgaggac
tttctcttaacctatcgtaccttcctgcccagtcctctgattctgggacagagacttcta
gactggtttaatgacccctgtttacgggacagggtaacccgggttgtgctcttatgggtt
aacaatcattttagtgattttgaaggagaccctgacatgaccagttttttggaggagttt
caaagcaacctggaaagagagaaaatgaccggtcagttgaggttgctcaacatcgcttgt
gcagcaaaagccaaacccagagtgataactgtaaccaggacagctcgagagatccccctc
ccctttacccttattggaggagctgaacgggggacacgcctcttcatcagcagtgtggag
gttggcagcaaagcagaggaggcagggcttaagcgtggagaccagatattggaggtgaac
ggacagacgtttgagaatgtgcagttgtcgaaagcgactgaaattctcaggaacaacata
cagctctctatgagtgtcaaaaccaacctacttgtcttcaaggagttggtggcaagggtg
gccgaggaaaggaaaaacggcgttcctcatcttccaaagattggtgacggaaagaaaaac
tgtcgatattctatacctgaacttggggctggttctgatgttataggtcaagaaaaaatc
agcaagaaggcaaaagcacatacagtgggtggccgaaacaaactgatgaagattctagac
aagacacgcatgagcatcctacctcagaaaccttacagtgacctcgggttggggcagact
caggatgacagcattgtgggattacggcagaacaaacagactccacccactatgccagtg
agcggaactctctcatccagtaaccctgacctggcacaaggccagcaacgcatcatcgac
tacagtacacagccaccagcacctggattcactcagttgcaagaccaggtgctgcgcatt
ttcaaggcagatcagcaaagccgttacttactggccaatagagacaccacagccagagaa
gctgccaatctagccataaaagagtttggcttgtctgcgagtcccgaagctttttcgctc
tgtgaagtttcagtcacacaggaaggagttatcaagcagagacgactgcctgatcaactg
tccaaactggctgacaggatccaactgagtgccaggtactatctaaagagcaatatggaa
accgagacgctgtgttcggatgtggaagcactggagatgcagagagaatctgtggtgccc
ctgttgtctttgagctcaatggagatagccaatcagctttcagcacgcaactatctgctc
ttctcctgcatcgaaccgacagattacatcaatgacctctttaagcttcacccacaagag
cctcccacaaacctgcgcaactttgagggtctggtgaaccaggagactttctgggtcgcc
acagagattgttcaggaaaccaacctggccaaaagagtgaagatcatcaagcactttatt
aagattgctcttcactgccgcgactgcaagaacttcaactctatgttcgccattatcagt
gggttcaatctggctcctgtctctcggttgcgatctacatgggaacggttgcctggaaaa
tacgagaagcttttggctgaattacaggatgtttttgacccttctcgcaacatggccaaa
tatcgcaaccttttgaacaaacacaaccttcagccgccggtgatccctctgttccccgtc
atcaagaaagacctcaccttcctccatgagggcaacaactcagaggtggacggtctggtg
aattttgagaagttgaggatgatcgcacgagagatcagacacgtggttcgaatggcttcc
atcaccatggaccctgcattgctttttaagactaggaagaaaaagtggaggagtcttgga
tctctaagtcaggtgagcagctcttctctgtctgacattggaacgatgggtggaaagaga
aagggcaggcggagctctttcctcagtgctaagaaactgtatgaggtggagatgatgagc
agacgtgtgcgccagtatctggacacgcactcaaacgagagcaacgaggacacacttcat
gagctctccatgacctgtgagcctgccaacagctccacactgaagcacgctggtgagagg
agacggattgatgcatctcctgctggtcagagaagtgccagtcctcaacaaacgaatgga
aatcatggtcgcaagaagtcaattagcaaagagttaccattcgagggccgagacagacaa
cgaaagctcccagaggacagccaatcaagcacttcatctatcctctcctctccacgtaat
tcacctcagagcacacctagaaaaggcccacagttagtggtaagcgaggtatcagatcag
atgagtctgttaagctcctcttcctccgaactcctcatggttgatgaccacacacacact
cagccccattcacttgcacatccactcagtgcacgcagggctgagccagatcaattaagc
ctggggtcctactccttgactcaggatcagtgtgaccgcgcatcactggacgcagcagac
agcggtcgtggcagctggacatcctgctcgagtggatcccatgacaatatccaaagtatt
cctcagcgtgtgggatattacgacagccgcagctgggagatgctgtcagatgggatgggg
cgaagtcacatgaccactcccaccggctactgggctgatgaactggaaggagacacagga
acgataaaacgcagaggtggaaaagacgaaactccaaacacaaacaagaacaccgtgagt
cggagggaggggcatttcagagagccgccgcccacaccaccgggttacactgctgtctca
ttggctgaggcagacaccaacagtcatgctcatgggcgacgcccaccagactacagcgcg
gctctgcagagatctcgattccttaaaaggacatgcgatcctcctccactgcactcgtcc
agcagattaccaccgtacagccactgccagactccacgacgatcacaagcagatgaaagc
gaacaaatatctgcagtttaa
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integrated database retrieval system
