Danio rerio (zebrafish): 794108
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Entry
794108 CDS
T01004
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
794108 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
794108 (nipblb)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
794108 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
794108
NCBI-ProteinID:
NP_001154919
ZFIN:
ZDB-GENE-030131-6070
Ensembl:
ENSDARG00000061052
UniProt:
F1QBY1
LinkDB
All DBs
Position
10:complement(41535795..41607674)
Genome browser
AA seq
2876 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVSCLLSRRDDA
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPLLLQTVLSRNPNVFREKSLMQQPMIPS
YKMPQNSMHGSPASNYQQTTITPSPPSRYVQTQAGSGSRYMPQQNSPVPSPYAPQSPAGY
MQYSHPPSYPQHQPIQQVSVSSPIVPSGMRNIHDNKVSGQVSGNSNHNARHCSSDEYINI
VQRLGNDEGDPAMRNTSFPVRSACSPAGSEGTPKVGPRPPLILQSPPPYTSPSDTAPDLL
LDSPERKKKQKRLLKEEGGKGAMYGIVSSPSKDSTKLTIKLSRVKSSETEQSAEPVVPVV
DHGSDAENEVSCNSLSYHRNPQERLSAGQCLSGEQSAYQQVPVLQNIGALAAKQPGVVSG
TPYDEAELDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEPGAAGTAGAS
GTPGVGGGCNAGNKLVPQEACAASNGSSRPALMVSIDLQQAGRVEGPVDSCPVPATEAQR
WTEDGSESTGVLRLKSKTDGEVQRTVDGRPEVIKQRVETTPQKTAVDGRPETPINKHENR
REISNKVSSEKRSDLSKHRHDGKAEKIRAEGKGHETSRKHEGRSELSRDCKEERHREKDS
DSSKGRRSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEK
GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREK
NQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEK
DRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDK
EQVKTREKDQEKERLKDRDKEREKVRDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSP
RVKQEPRNGEESKIKPERSVHKNSNNKDEKRGGENKNQLDGHKPQSIDSKTADFPNYLLG
GKSSALKNFVIPKLKRDKEGNVMQEVRIELFSEPRVKLEKLDLVEDLNKGAKPVVVLKKL
SIDEVQKMISNSRSSKSSRSSHGRFRETDSRLPLCERVKMNKRRRSSTNEKPKYAEVSSD
DDSSSSVEIAPKRSKKDRDKTWEYEEKDRRGSGDHRRSFDSRRSSGGRHRERSPEDSDED
SPPPSLSDLARKLKKKEKQKKRKAYEPKLTVDEMMDSSTFKRFTTSVDNILDNLEDVDLT
SLDDDEIPQELLLGKHQLSELSSESAKIKAMGIMHKITHDKMVKVQSILEKNIQDGAKLS
TLMNHDNDRDDEERLWRDLIMERVTKSADACLTALNIMTSARMPKAVYIEDVIERVVQYT
KFHLQNTLYPQYDPVYRVDHHGGGTLSSKAKRAKCSTHKQRVTVMLYNKVCDIISNLSEL
LEIQLLTDTTILQISSLGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSL
ARLPTSKRNLRNYRLNSSDVDGEPMYIQMVTALVLQLIQCVVNLPSDKDSDEENDRKVDH
DVLITNSYETAMRTAQNFLSVFLKKCGSKQGEDDYRPLFENFVQDLLSTVNKPDWPAAEL
LLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSKMDQRSINRILGENSG
SDEIQQLQKALLNYLDENVETDPFLLFARKFYLAQWYRDTSTETEKAMKSQRDDDSSDGP
HHAKDVETTSEILQKAEARKKFLRSVIKTTASKFSSLRVNSDTVDYEDSCLIVRYLASMR
PFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNS
TSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNK
VTEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKEAMTRKILNITDVVAACRDSG
YDWFEQLLQNLLKSEEDASYKPARKACAQLVDSLVEHILKYEESLADCENKGLTSNRLVA
CITTLYLFSKIRPHLMVKHAMTMQPYLTTKCNTQSDFMVICNVAKILELVVPLMDHPSES
FLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNRVTHNYKFVWSCFNRYYGALSKLKMQH
QEDPNSTVLVSNKPALLRSLFTVGALCRHFDFDQEEFKGSNKVVIKDKVLELLLYFTKND
DEEVQTKAIIGLGFLFIQDPGLMFVTEVKNLYNTLLADRKTSVNLKIQVLKNLQTYLQEE
DSRMQEADREWNKLSKKEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHYALNV
IALTLNQGLIHPVQCVPYLIAMGTDSEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMS
YQVQQAIVGSKDTVIRGFRLDESSTALCSHLYTMVRGNRQHRRAFLISLLNLFDDNTKSD
VNMLLYIADNLASFPYQTQEEPMFIMHHVDITLSVSGSNLLQSFKESLLKEPRKVEVVKK
KKKKKKKKKQKQKRGKKYGSEEEDESSRSSSSSSSSSSSSSDSDSSEEEVIHRRKKPRRT
TANSDSDSDLDVEDVDKVMLRLPDNPEPLLDFANASQGILLLLMLKQHLKNLYGFSDSKI
QKYSPTESAKIYDKAVNRKANVHFNPRQTLDYLTNSLSNSDLSNDVKRRVVRQYLDFKVL
MEHLDPDEEEEEGEASASSHARNKAINALLGGSSPKNNAAESYDDDSEVEEKTPGSSRRS
RRTGDSAEASGHRNETVEATDVIALCCPKYKDRPQIARVIQKTSKGYSIHWMAGSYSGTW
AEAKKRDGRKLVPWVDTIKESDIIYKKIALTSAHKLSNKVVQTLRSLYAAKEGSSS
NT seq
8631 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggacatgcctcatgttcctatcaccactctcgctgggattgcaagcctcacc
gacctgttaaatcagctgcctctgccctctcctctacctgccaccaccactaagagcctg
ctgtacaatgggaggatcgcggaggaggtcagctgtcttctgtcccgccgggacgacgcg
ctcgtgtctcagctggcacacagcctcaaccaggtgtccaccgaacacatagagctgaag
gacaacttgggcagtgatgacccggaaggagatgtgcctctactgctacagacggtgctg
tccaggaaccccaatgtcttcagggagaaaagtttaatgcaacagccaatgataccatcg
tacaagatgcctcagaattccatgcatggaagtccggcgtcaaactaccagcaaaccact
ataactccgagccctcccagccgatatgttcaaactcaggcgggttctggtagcaggtac
atgccccagcagaacagtccagtgcccagtccgtatgcaccacaaagtcccgcgggctac
atgcagtacagccacccacccagctacccccagcaccaaccgatccagcaagtttccgta
tccagtccaatagttcccagcggcatgagaaatattcacgacaacaaagtctctggtcaa
gtgtcgggtaactccaaccacaacgcgaggcattgctccagcgacgagtacatcaacatc
gtccagagacttggaaatgatgagggtgaccccgccatgagaaatacctcttttcctgta
cgctccgcctgttctcctgctggaagtgaagggactccaaaagttggacctcggccgccc
ttgattcttcagtctcctccaccctacacctcccctagtgatacagctcctgacctcttg
ttggattcgcctgaacgaaaaaagaagcagaaaaggttattgaaagaggagggaggtaaa
ggtgccatgtatggcattgtcagctcgccttctaaagactcgactaaactgacaataaag
ttgtctcgagtaaagtcatctgagactgagcagtcagctgagcctgtggtacccgttgta
gaccatggctcagatgctgagaacgaagtatcgtgcaacagcttatcatatcaccggaac
ccccaggagcgactctccgccggtcagtgtctttcaggggagcaatcagcctaccagcag
gttcctgtactacaaaacattggggcacttgcagctaaacaacccggggtagttagtgga
accccgtacgatgaggcagagctggatgctcttgctgagattgaaaggattgagagggaa
tctgctatagaacgagaacgctgctctaaggaagttcaagataaagacaaacctctgaag
aagagaaagcaggattcgtaccctcaggaaccaggagctgcaggcactgctggcgcttct
ggaacacctggtgttggtggcggatgcaatgctgggaacaaactggtacctcaagaggct
tgtgctgctagcaatggatccagtcggccggccttgatggtcagtattgacctgcagcaa
gcaggtagggtggaagggccagtagactcctgtcctgtgcctgcaacagaggctcagcgc
tggacggaggatggctctgaatccaccggggtcttgaggctcaaatcaaagacagatggg
gaggtgcagaggacagtagatggtcggccagaagttatcaagcaacgagtggaaacaaca
ccacagaaaactgctgtagatggacgaccagagactcccaaaaacaagcacgaaaaccga
cgagaaatctctaacaaagtgagttcggaaaagaggtcagatttgtcaaagcacagacat
gatggtaaagctgagaaaataagggctgagggaaaaggccacgaaacctcccgaaagcat
gaaggaagaacggaattatctcgagattgcaaagaggaaaggcacagagaaaaggacagt
gacagctctaaaggccgccgatcagatacatcgaagtccagtcgagtagagcacaatcgg
gacaaggagcaggaacaagaaaaagttggggataagggccttgagaaaggcagagaaaag
gagctggagaaaggcagagacaaagagagagtgaaagatcaggagaaggaccaggagaag
ggtcgtgataaggaggtggagaaaggcagatacaaagagcgggtaaaagatcgggtcaag
gagcaagagaaagtccgggacaaggagcaggtgaaaggtcgggacaaaaaacggagcaag
gacctggaaaaatgtcgggagaaagatcaggacaaggagctagaaaaagatcgagagaaa
aatcaggacaaggagctggagaaaggtcgggagaaagatcaggacaaggagctggaaaaa
ggtcgggagaaagatcgggacaaggagatggaaaaagctcgggagaaagatcaggacaag
gagctggaaaaaggtcgggagaaagatcaggacaaggagttggaaaaaggtcaggaaaaa
gatcgggataaggtccgagagaaagatcgggacaaggttcgagataaagatcgggacaag
gttcgtgagaaagatcgggacaaggttcgtgagaaagatcgtgacaaacttcgggaaaaa
gacagagaaaagatacgggaaagagatcgagacaaagggcgggagaaagaccgggacaaa
gaacaggttaaaactagagagaaagatcaggagaaggaacggttgaaagatcgggacaaa
gaacgagaaaaagttagggataagggtcgggatagggatcgagaccaagaaaaaaagcgc
aacaaagaactcacagaggataaacaggctccagagcagcggtcacgtcccaacagtcct
cgagtaaaacaggaaccccgtaatggagaagaatccaaaataaaacctgagcggtcagtc
cacaaaaattccaacaacaaagatgagaaacggggtggggaaaacaagaatcaacttgat
ggacacaagcctcaatcaatagacagtaaaacagcagattttcctaactacctattaggg
gggaaatcgagtgcattaaagaattttgtcattcccaagttaaaaagggacaaagagggt
aatgtgatgcaggaagtgcgaatagaactgttttccgagccacgtgtgaaattagagaag
ctagacctggtagaggacctcaataagggcgctaaacccgttgttgttctgaagaaactt
tccattgatgaggtccagaagattatcagtaattcacgcagctcaaaatcgagcaggtca
tctcacggcagatttagagagactgattctcgtttgccactatgtgagagggtgaaaatg
aataaacgcagacgcagctccactaatgagaaacccaagtatgcagaagtcagctcagat
gatgatagtagtagctctgtagaaatagctccaaagcgttcaaaaaaggacagagacaaa
acatgggaatatgaagaaaaggaccggcggggttctggagatcaccggcggagcttcgac
agtcggagaagttctggaggtcgacatcgagaacgcagccctgaagactcagatgaagat
tcacctcctccaagcctaagtgaccttgcccgaaagctgaagaaaaaagaaaagcagaaa
aagaggaaagcctacgagcccaaactgactgtggatgaaatgatggactcatcgacgttc
aagagatttacaaccagtgttgacaacattcttgacaaccttgaagatgtggacttgacg
tcattagatgatgatgagattccccaggagctgctgctcggaaaacaccagctctcagag
ttaagcagtgaatcagccaaaataaaggccatgggcatcatgcataagattacacatgat
aaaatggtgaaggtccaaagtattttggaaaagaacatccaggatggcgcaaagctctcc
accctcatgaatcacgacaacgacagggacgacgaggagcgcttgtggcgtgacctcatc
atggagcgtgtcaccaaatctgctgatgcttgtctgacggctcttaacatcatgacctca
gcacgaatgcccaaggccgtttacatcgaggacgttatcgagagggtcgtgcagtacacc
aagtttcatctacagaacacgctgtacccacagtatgacccggtctatagggtggatcat
catggtggtggaacactaagctcgaaagccaagcgagcaaaatgctcaacgcacaagcag
agagttacagtcatgctctacaacaaagtgtgtgacataatcagtaacctgtctgaactc
ctggagattcagttgttgacggacacaaccatcctccagatttcatctctaggtatcact
ccattttttgtggagaacgtgagcgagctgcagctctgtgccattaaactagtgactgct
gtattttctcgatatgagaagcacagacagctgatcctggaggagatcttcacctctcta
gccagactgccaaccagcaagaggaacttgaggaattacagactgaacagcagtgatgtg
gatggagagccgatgtacattcagatggtgacagcgctggttctgcagctcattcagtgt
gtggttaatctgccttcagacaaggactcggatgaggagaatgacagaaaggttgatcat
gatgtgctaatcacaaactcatatgagactgcaatgaggacagcacaaaacttcctctct
gttttcctcaaaaagtgtggtagtaagcagggtgaagacgactacaggccgctcttcgag
aactttgttcaggatctcctttctacggttaacaaacctgattggccggctgcagagcta
ctgctgagccttctgggaaggctgctggttcatcagttcagtaataagcagacggagatg
gctctgagagtggcttctttggattacctgggcacagtggctgcgcgacttcgcaaagat
gccgtcaccagcaaaatggaccagcgctccatcaaccgcatcctcggagagaactcaggc
agcgatgagattcagcagttgcaaaaggctctgctgaattacctggatgagaatgtggag
actgacccatttctcttgtttgcaaggaagttttaccttgcgcagtggtacagggacacc
agcactgagactgagaaagccatgaaatctcagagggacgacgattcgtctgatgggcct
caccacgctaaagacgtcgagaccactagtgagatcttgcagaaagctgaagctcgcaag
aagttcctccggtctgttattaagaccacggcatcaaaattcagctcactgagagtaaac
tcggatactgtggattatgaggactcgtgtctcattgtgcgatatctggcctccatgagg
ccgtttgcacagagctttgatatttatctcacacagatcttgagagttctcggtgaaagt
gccattgcagtgagaactaaagcgatgaagtgtctttctgaagtggtggcagtggatccc
agtattcttgcgcggctggacatgcagcggggcgtccatgggcgattgatggacaactcc
accagtgtgagagaagctgcagtcgagctgctgggacgcttcgttctgagccgaccgcag
ctcactgaacagtattacgacatgctgatcgagcgcatcctggacacgggcatcagcgtg
aggaaaagagttattaaaatcctgcgagacatctgtctggagcagcccaccttcaacaag
gtcacggaaatgtgtgtgaagatgatcaggagggtcaatgacgaagaaggcatcaagaaa
ttggtgaatgaaacgtttcagaagctctggttcactcctacgcccaatcacgataaagag
gccatgacgcgcaagattctcaacatcacagacgtggtcgctgcctgcagggactccggt
tacgactggttcgagcagctgcttcagaatctgttaaaatcagaggaggacgcctcatac
aaaccggccaggaaggcttgtgctcagctggtggacagtcttgtggagcacattctgaaa
tatgaggagtctctcgctgactgtgagaataaggggttgacgtccagtcgcttagtggcc
tgtatcaccacgctgtacctgttcagcaaaatccgaccgcatctgatggtgaaacacgcc
atgactatgcagccctacctgaccacaaagtgtaacactcagagtgattttatggtgatc
tgtaatgtggcgaaaatcctggagcttgttgttcctttgatggaccatccgagtgaaagc
ttcctcaccactatcgaagaagacctgatgaaactcatcataaaatacggcatgacggtt
gtgcagcactgtgtgagttgtcttggcgcagtcgtcaatagggtgacccataactacaag
tttgtctggtcttgtttcaaccgctactatggagcactgagcaagctgaagatgcagcat
caggaggacccaaacagcaccgtcctggtctctaataaacctgcactgctgcgctcgctc
ttcaccgtcggtgcgctgtgcagacatttcgacttcgaccaggaggagttcaaaggaagt
aataaggtggtcataaaggacaaggtgctagaactgctgctgtatttcactaagaacgat
gatgaggaggtgcaaaccaaagccatcattggtctagggtttctgttcatccaggaccca
ggactcatgtttgttacagaggtgaaaaacctctacaacaccctcttggccgacaggaag
acatcagtgaatctgaagattcaggtgttgaagaacctgcagacatacctgcaggaggag
gattcccgaatgcaggaggccgacagagagtggaacaaattgtccaagaaggaggacctg
aaggaaatgggcgacatctcgtccggcatgagcagctccatcatgcagctctacctcaag
caggtgctggaggctttcttccacacgcaatccagcgtcagacactacgccctcaacgtc
atcgccctaacacttaatcaggggctcattcaccctgtacagtgtgtcccatatttgatt
gcgatgggaaccgattcagagcccacaatgaggaataaagctgatcaacagttggtggag
attgacaagaagtacacaggcttcattcatatgaaggctgtggcggggatgaagatgtca
tatcaggtgcagcaggccatcgtgggctcgaaggacactgtgatcaggggtttccggctg
gacgagagcagcacagctctgtgttcacatctgtacacgatggtgcgtggaaacaggcaa
caccgcagggctttcctcatctcactgctcaacctgttcgacgacaacacgaagtcggat
gtgaacatgctgctgtacatcgcagacaatctggccagtttcccctatcagactcaggag
gagccgatgttcatcatgcatcatgtggacattacactgtctgtgtccggcagtaacctg
ctgcagtccttcaaagagtctctcctgaaagagccgaggaaagtggaggtggtgaaaaag
aagaaaaagaagaagaagaagaagaagcagaagcagaagcgagggaagaagtacggctct
gaggaagaggatgagagcagtaggagtagcagcagcagtagcagcagcagcagcagcagc
agtgacagtgacagctctgaagaggaagttattcatcggcggaagaaacccagacggacc
accgcaaactccgattccgattctgacctggacgtggaggatgttgataaagtgatgttg
cggctgccagacaacccagaacccctgctggacttcgccaacgcgtctcagggcatcctc
ctgctcttgatgctcaaacagcacctcaaaaacctctatggcttctctgacagtaaaatt
cagaagtactcgcctacagaatctgcaaagatttatgacaaggctgtaaacaggaaagcc
aacgtgcatttcaacccacggcagacgctagactacctgaccaacagtctgtccaatgca
gatctcagcaacgatgtcaagaggagagtcgtcagacagtatttagattttaaggtactg
atggagcacttggacccggatgaggaagaagaagagggagaggcttcagccagttcacac
gccagaaataaagccatcaatgctctgctaggaggctccagtcccaagaataatgctgct
gaatcgtacgacgacgacagtgaagtggaagaaaagactcctgggtcctcccggaagtca
aggagaaccggagattcggcggaggcatcaggacacaggaacgaaaccgtggaagccacg
gacgtcatcgctctgtgctgccctaaatataaggaccggccgcagatcgcacgcgttatt
cagaagaccagcaaaggatacagcattcactggatggccggatcctactccggcacctgg
gccgaggccaagaaacgagacggacgcaaactggtgccttgggtggacactataaaggag
tctgacattatttacaagaaaattgccttgacgagcgcacacaaactgagcaacaaagtg
gtgcagactttacgttcactgtacgcagccaaggaaggatcttccagctaa
DBGET
integrated database retrieval system
