Danio rerio (zebrafish): 794432
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Entry
794432 CDS
T01004
Name
(RefSeq) F-box only protein 40 isoform X1
KO
K10315
F-box protein 40
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
794432
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
794432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-TRAF
Sina_ZnF
PRANC
Motif
Other DBs
NCBI-GeneID:
794432
NCBI-ProteinID:
XP_073786162
LinkDB
All DBs
Position
18:45656294..45694439
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AA seq
685 aa
AA seq
DB search
MGKNRTTSSGFHPHCEKCHNWNCKFPIEISTSCIFISCRLNCGAAFHLCKEDEHRLLCPK
ETVPCLNSGYGCPMTMTRKRLAQHLEVCPASVVTCTLEWNRWPVNETDTTFYRNALQDPN
WMSQLDLAMALRDQKLLFDSIQMKTLFPELIEKVEEPAVSLDGAVGGLDPECSESQILIP
EESLEDSLNGEEIKELTQEERLALAESKDVACLENYGIWERMFAKEKQGCNQTVKKLEDT
SCQIKDKNSPQNSDNLDIDRTGLAPWQDGVLDRLRKEVNVAEYNMYLVHNGCMLINFGQL
AACTPKEKDFVYGNIEPIEVQTIHSFNVPTSYRAKRSHLKDPSQMIKKTHRSVDTSDLGI
ATEVLPKAKVVESTLLCSLERELKGHQICESVGIDGLYVDVGTQTFDFHSAPFKSDATLA
NVVADQPQSLHVQIQTECVTRRHNKLCSAFTYLCHHAFRRDEYPWHFRNVHGDIQSCLTG
WFLQRCPLAYLGCTFSQKQFRPSKYYATVSYDADLSTFILQPEVTASLYKGVKNVNSERK
RAKNLDSLSRLPFEILQHIVSFLDSISLGRLSQVSQLMREVCSAVLQQKGMVSLKWEKKT
YSHGGFTWRARKKAWEFSSLFSPVDKWVFEDMPPMAEHLKVCPFYQKEIRSEPVALPSMT
DLQKGREELQTLVNNVFTADKANGD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaataggaccaccagttctggttttcatcctcactgtgaaaaatgtcacaat
tggaactgcaagtttcccatagaaatctcaacatcttgtatcttcatttcctgccgcttg
aactgcggagctgccttccacctttgtaaagaggatgagcatcgtcttctatgccctaaa
gaaacagtaccatgcctcaactctggttatggctgtcccatgactatgacacgaaaaaga
cttgcccagcatctagaagtgtgtcctgccagtgtggttacatgtaccttggaatggaac
cgatggccggtaaatgagactgataccaccttctataggaatgctctacaggatccaaac
tggatgagtcagctagaccttgcaatggcacttagagatcagaagcttctctttgattca
atccagatgaagacactgtttcctgagttgatagagaaggtagaggagcctgcggtttca
ctggacggtgctgttggaggacttgatccagagtgctcagagtctcagatcttaatccca
gaagagtcgttggaggatagccttaatggagaagagatcaaagaactaacccaagaggaa
cgtctcgctttggctgagagtaaagatgtagcctgcttggagaactacgggatatgggag
agaatgtttgcgaaggagaagcaagggtgcaatcagacagtgaagaaattagaggataca
agttgtcagattaaagacaagaattcccctcagaattccgacaatctagacattgatagg
acaggtttagctccttggcaagatggtgttcttgacaggctccgtaaagaggtcaacgtg
gctgagtataatatgtatctggtccacaacggatgcatgcttatcaacttcggccaactg
gcagcttgcacgcctaaagaaaaagattttgtttatggcaatatagagcccattgaagtt
caaaccatacactccttcaatgtgccaaccagctacagagccaaacgtagccatctgaag
gatccatcccaaatgattaaaaagacacaccgatctgtggacacatctgatttaggcatt
gcaactgaagtgcttccaaaggcaaaagtggtagaatccacactgctgtgctctcttgaa
agagaattaaaaggtcatcagatttgtgagagtgttgggatcgacgggctatatgttgac
gttggcacccaaacctttgacttccattctgctccattcaaaagtgatgcaactttggcc
aatgttgttgcagatcagcctcaaagcctacacgtgcaaattcaaaccgaatgtgttact
aggaggcacaacaaattatgctcagcctttacttacctgtgccatcatgccttcaggcgt
gatgaatatccctggcactttaggaacgtgcatggagacatccaatcatgccttactggc
tggtttttacagcggtgcccactggcttacctcggttgcacctttagccagaagcaattt
cggccatctaaatattatgccactgtaagctatgatgcagatcttagtactttcatctta
caaccagaagtgacagcatctctttacaaaggagtaaaaaacgttaacagcgaacgcaaa
cgtgccaagaatttggattccttgagcagacttccttttgaaatcttacaacacatagtg
agttttctggatagcatttctttgggtcgtctatctcaagtttcccagctaatgagggaa
gtttgcagtgctgttcttcagcagaagggcatggtgtcactcaaatgggagaaaaagaca
tactctcatggtggattcacttggagggcacgtaaaaaggcatgggagtttagcagtctg
ttctctccggtggataaatgggtttttgaagacatgccccctatggcagaacacctgaag
gtttgtcctttctaccagaaggagatcagaagcgaacctgtggcgttacccagtatgaca
gatctccagaagggaagagaggaattacagactctagtcaacaacgtttttactgctgac
aaggctaatggagattaa
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