Danio rerio (zebrafish): 796087
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Entry
796087 CDS
T01004
Name
(RefSeq) uncharacterized protein toporsb isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
796087
03036 Chromosome and associated proteins [BR:
dre03036
]
796087
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
796087
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
796087
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
796087
UBL E3 ligases
796087
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
796087
Cilium and associated proteins [BR:
dre03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
796087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
TetR_C_21
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
796087
NCBI-ProteinID:
XP_003201680
ZFIN:
ZDB-GENE-110728-3
Ensembl:
ENSDARG00000105028
UniProt:
A0A0R4ICA2
LinkDB
All DBs
Position
23:complement(49372003..49385257)
Genome browser
AA seq
939 aa
AA seq
DB search
MAPSKMKLRVRKKDSASKTSQRLLANASPDSKCPICLDGFNNVASLDRCLHQFCFRCIHE
WSKNKAECPLCKQPFHSIFHSVKGENDFKEFVLWPPENGAANANAADPSERVLRPRVLRR
RERRSNRVQTPAPSSTPPIEDDVMFDGLSDAAALAENQDVQQMMLRLTARRAGRGEGRSL
RRLREQDVVAFRRALYRTGVRVRSARDASRQRDISASFLRQNPGCLRRLLPWLQRELTVL
YGSHGSLVNIVQNVIISRIMNYNMEESIIRDELRPFLLARTDHFLHELVSFARSSLNMEA
YDLQAVYDCPAPSYEEGSSSDLSVIAISEDEEDNDSENNVIENPSAVQERIASVATASGT
DSLLSQSAWDDETPGPSYSSILQSSNQSQDEGAEPSSSTAPPLASTDGTDPAAISAADEE
EECLIVGYVKPMAERTPELVQLSSDSSEEEEQQAAATETPATVTKSETGQSQLPLPSHMK
PLSPSSFAGPAPSCSPQANPSVPQEILSFSRERESDYYSSHGHRSRLASWSELRVHGRRK
DRSHRHNKEKAKSIEQIQQPTTLECSPMHSPQSWSGQSSAVSICSISPGSPSYDSDYSPS
PKTKGRKHSCRVQERIRQSPSYSGRKSTKERMSRSPDLDLFIGSHHPRESKRHRKRRKRS
VSSSSADSHSEKSCLDKPSGKRKYKTRHLERAAQRQHEEGNPSKEKRSKLRSRDRSPSVE
IIYERRAPDPHWVSRKKKKKHRKRRKDLDSPTVITIDSDSDRTIDCLDRVMDVIDQTAAD
IEQRDGTSEQAETCTVASSNLFSESSSPVRPSDPTNEQSLNLDDCVVDVVDQSSSDCSHN
IDSSNHEEIVPDPFPMSSITTAPSSDTRLLESILQDLEEFLPAEEPEIGQSACARSPVQQ
DLTSVPPKDQSDTGGDVDNSENKTTGGDEPQEMATNTAS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctctaagatgaagctgcgtgtgaggaagaaagacagcgctagcaaaacatcc
cagcgtttattagccaatgcgtcacctgattccaaatgcccgatctgcctggacggcttt
aataatgttgcgtcgttggaccgttgcctgcatcagttctgcttccgctgtatccacgaa
tggtccaagaataaggcagagtgtccgctctgcaagcagccgttccactccatattccac
tccgtcaaaggtgaaaacgatttcaaggagttcgtattatggccgccggagaatggagca
gcgaacgccaacgcagccgatccatcagagcgtgtgcttcgcccacgagttctccggcgc
agagagaggcggagcaacagagtgcaaacccccgccccctcctccactcctccaatagaa
gatgacgtgatgtttgacggactgtcagatgcggcggcgctggcggagaatcaggacgtg
cagcagatgatgctgcggttgaccgcgcggagggcggggcggggagaggggaggagcctg
cggcgcttaagagagcaggatgtcgttgcattcagacgtgcgctttacagaactggcgtg
cgtgtgcgcagcgcaagagatgctagcagacaaagggacatttctgcgtcattcttgcga
caaaaccctggttgcttgcgccggctgttgccatggctacagcgcgagcttacggtgcta
tatgggtcgcacggctcattggtgaacattgtgcagaacgttattatctcgcgcattatg
aactacaacatggaggagtcgatcattcgggacgagctccgccccttcttgctggctcgc
actgaccacttcctgcacgagctggtgagttttgcgcgctccagccttaatatggaggcg
tacgacctgcaggcggtttacgactgtccagcacccagctacgaggagggcagcagctcg
gatctgtcagttatcgctatctctgaggatgaagaagataacgacagtgagaataatgtg
attgagaacccctctgctgtccaggagcgcattgcatctgtggccaccgcaagtggaaca
gacagtttactgagtcagtctgcatgggatgacgagacgcctggtccctcatattcaagc
atccttcagtcctctaaccaatcacaggatgagggggcggagcctagctcaagcacagcc
ccacctcttgcctccacagacgggactgaccctgcagcgatatccgccgcagatgaagag
gaagagtgcctgattgtgggatatgtgaaaccgatggctgagcgcacaccagagctcgtt
cagctctcttcagactcctccgaagaggaggagcaacaagctgcggccacagagacgcca
gccacagttacaaagtcagagacgggtcagtctcagctcccgctgccatcccacatgaag
ccgctgagccccagctcctttgccggccccgctccctcctgcagcccccaggccaaccct
tcagtcccgcaggagatcctatccttcagcagagaacgagagtcagactactactccagc
cacggccaccgttccagacttgcttcatggtcagagctcagagttcacggcagacgcaaa
gaccgatcgcatcggcacaataaagagaaagccaagagcattgagcagatacagcagccc
acgactctggagtgctcaccaatgcattcaccccagagttggtccggccagagctctgct
gtgtctatttgcagcataagccctggatctccatcatacgacagcgactactctccctca
ccaaaaaccaagggtcggaagcattcctgtcgagtgcaggagagaatccggcagtcacct
tcttactccgggagaaagagtaccaaggaaaggatgagccggtctcctgacctggacttg
ttcattggttcacatcatccacgcgagtcaaagcgccaccgtaaacgtcgcaaacgttcg
gtcagcagcagcagtgccgattcacactctgaaaagtcctgtctggacaaacccagtgga
aaacgcaagtacaaaacccggcatttggagcgtgcagcccagcgccagcatgaagaggga
aacccgagtaaggaaaagcggagtaagctgcgcagtagagaccgatccccgagtgtggag
atcatctacgaaagaagagcaccggatccgcactgggtctcgcgtaagaagaagaagaag
caccgaaaacgaaggaaggatctggattccccgacagtgatcactattgacagtgacagt
gaccgcaccatcgactgcctggacagagtcatggacgttatagaccaaacggctgctgat
attgagcagagggacggcacttctgaacaggcagaaacttgtaccgtggcctcctcaaat
cttttctcagagtcctcgagtcctgtgcgccccagtgacccgaccaatgaacaatcacta
aacctggatgattgcgtggtggacgtagtcgatcaaagtagctcagactgctcccacaat
attgattccagtaaccacgaggagattgtccctgatcctttcccaatgtcttcaataacc
acggctccgtcttcagacacaaggctgcttgaaagcatactgcaagatctcgaggagttc
ctaccagctgaagagccagagatcgggcagagtgcttgcgcacgttctccagtccaacag
gacctcacttctgtccctccaaaagaccaatcagacactggaggagatgtggacaactct
gagaacaagacgactggcggtgatgagccacaggagatggcgaccaacactgctagctaa
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