Danio rerio (zebrafish): 797150
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Entry
797150 CDS
T01004
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha A
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
dre04140
Autophagy - animal
dre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
797150 (hif1aa)
04137 Mitophagy - animal
797150 (hif1aa)
04148 Efferocytosis
797150 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
797150 (hif1aa)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
797150 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
PAS_2
WASH-7_C
Motif
Other DBs
NCBI-GeneID:
797150
NCBI-ProteinID:
NP_001295488
ZFIN:
ZDB-GENE-080917-55
Ensembl:
ENSDARG00000006181
UniProt:
F1QNB9
LinkDB
All DBs
Position
13:35164852..35191061
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AA seq
717 aa
AA seq
DB search
MEAVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYELSRELPLPHSVTSNLDKASVMRL
ALSYLRLRKLLNSDVLEKETALDTQWNGSFLKALDGFLLVLSADGDIVYLSENVSKCLGL
PQIELTGHSVFEFTHPCDHEELREMLAHRFGLSKKSKDQNTNRSFLLRMKCTLTSRGRTV
NVKSASWKVLRCSGRIHTADGVEKEVCEEKNTCSTYLVLICESIPHPANIEAPLDSRTFL
SRHTLDMRFTYCDERITELLGFDPEDVLQHSVYEYYHALDSDHMTKTHHSLFVKGQVCTG
QYRLLAKAGGFVWAETQATVIYNSKNSQAQCVVCVNYILSGIEQPKQILSLQQTNSTKIK
QEEHQEEVEVTMAELKEEEKEMDKEDEECVQPVVQHNSLKGETEALTVADPVLTLDINIT
DSAISVLTEIPLYNDVMLPSSDVLLPLSPLSPPCSSLNDDEASTGHLQHDQFPFQQSSDS
SRSQVDLPVDSELCDQLKPDHVEKHFSMDIESKTQGVGLDLEMLAPYIPMDDDFQLRTVS
PVRPMCSSPCSGLDLTPSSSTQTSPALSAATPDSLSCDPVQQKNKTTVQDHSREIIQDSD
ISYKCQTNPKLLKRKLETIPLSEAIRLGSVLQVVTDFPEKKVRKTDAPSSEGIRHATILL
LPSNVASRLLSRSSEGGAIAMPLPQITHHDCEVNAPVIGRQHLLQGEELLCALDLVI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcgcacctgggaaaaaaagggtgagttcagagcgaaggaaggagaaatcc
agagacgcagcacgttgtcggagaggaaaagagtctgaggtgttttatgagctgtccaga
gaactccctctcccccacagcgtcacctctaacctggataaagcatcggtcatgagactg
gctctcagttacctgcgcctgcgtaaactgctgaacagcgatgtgctggagaaggagact
gcattagacactcagtggaacggttcatttctgaaagctctggacgggtttcttttggtt
ctttcagctgatggtgatattgtctacctttcagagaatgtcagcaagtgcttgggcctt
cctcagattgaactcactggtcacagtgtgtttgagtttactcatccgtgtgaccatgag
gagctcagagaaatgctggcacacagatttggtctgtctaagaaatcgaaagatcaaaac
acaaacagaagtttcctgctgaggatgaaatgcacgctgaccagcagagggcgcactgtc
aatgttaaatctgcctcctggaaggtgctgcgctgttcgggccgtatccacacagcagat
ggtgttgagaaggaggtgtgtgaagaaaaaaacacgtgttcgacgtacctggtgctcatc
tgcgagtctattccccatccggcgaacattgaggctcctctggattccagaacgttcctc
agccgccacactttagacatgcgcttcacctactgtgatgagaggatcacagagctcttg
ggttttgatccagaggatgtgttacagcattctgtgtatgaatactatcatgcgttggat
tcagaccacatgaccaaaacacaccacagcctttttgtgaaggggcaagtgtgtaccgga
cagtaccgtctgctggctaaagccggagggtttgtttgggcagagactcaggccactgtg
atctataacagtaaaaactctcaggcacagtgtgtggtttgtgtcaactacatcctcagt
ggcattgaacaacccaaacaaatcctgtcgcttcagcaaaccaacagcacaaaaataaaa
caggaagaacaccaggaggaggttgaggtgaccatggcagagttgaaagaggaggaaaag
gagatggacaaagaagatgaggagtgtgtgcagcctgtagtgcaacataacagcctgaag
ggggagacagaggcgctgactgtagcagatcctgttctcacgctggatatcaacatcact
gactcagcgatctctgtcctgacagaaattcctctctacaacgatgtcatgttgccctct
tcagatgtcctgctccccctctcgcccctatctcccccgtgctcctctctaaatgatgat
gaagcctccacaggccatctacaacacgaccaattccctttccaacagtcctctgactcc
tccagatcacaggttgatctaccggtggattcagaactatgtgaccagctaaaaccagat
cacgttgagaaacacttttccatggatatagagtccaagacacagggagtgggtttggat
ctggagatgttggctccatacattcccatggatgatgacttccagctgcggactgtttct
ccagtcaggcccatgtgctccagtccatgttcagggcttgatctgaccccgtccagcagc
acacaaaccagccctgctctttcggcagccactccagattcgctatcctgtgatcccgtg
cagcagaaaaacaaaaccacagtgcaggaccacagcagagaaattattcaagacagtgat
atttcttataaatgtcagaccaacccgaagctactcaagaggaaactcgagaccataccg
ctgtctgaagcaataagactggggtctgtgctgcaggttgttaccgattttccagagaaa
aaggtccgcaaaacagatgctccatcatcagaaggaattcgtcatgctacgatactgttg
ctgccatccaatgttgcaagtcggttattgagcagatcgtcagagggcggagccatagct
atgcccctcccccaaatcacccatcacgactgtgaggtaaatgcacctgtgattggacga
cagcacctgctgcagggggaggagcttctttgtgccttggatttagttatttaa
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