KEGG   Danio rerio (zebrafish): 797296
Entry
797296            CDS       T01004                                 
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
  KO
K11432  [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00310  Lysine degradation
dre01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    797296 (prdm2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    797296 (prdm2b)
   03036 Chromosome and associated proteins [BR:dre03036]
    797296 (prdm2b)
Enzymes [BR:dre01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     797296 (prdm2b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    797296 (prdm2b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     797296 (prdm2b)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2 zf-C2H2_4 SET zf-C2H2_6 zf-C2HE zf-C2HC_2 Zap1_zf1 zf-C2H2_ZNF462_1st zf-C2H2_jaz
Other DBs
NCBI-GeneID: 797296
NCBI-ProteinID: XP_002663834
ZFIN: ZDB-GENE-080613-3
Ensembl: ENSDARG00000076451
UniProt: F1QGQ8
LinkDB
Position
11:complement(26189703..26217580)
AA seq 1792 aa
MALPQGAYETLDDIPAHVWKGLPNSMKLEPSAVNPSRIGVWASRLIPKGKRFGPFVGERK
KRSQVTSNVYMWEVYFPAWGWMCVDATDPMKGNWLRYVNWARSSQEQNLFPLEINRAIYY
KVLRPIGPDEELLVWYNGEDNPEIAAALEEERTSNLNKKSSPRAKRARRSLKSKELSEKS
RQTDLGGFCEPKKLSASEPSITEMRDSEEGLNGEEGPSSPSELQQENAVSQALSTENENP
VQSHATEMNRWEGLNEENTEADGQLQQPQLNQSPQHPSEAESVEGNEKSLLQSHSGSPAE
ESSESPLCDTDCISSLANPELEAEGDFEDDPQGETYPCQHCERHFSTKQGLERHTHIHTT
SNHQTHTFKCRYCAKPFGSQVGRRRHERRHENGSKTLNRPGSLSGTSFLPSPTVANDSAT
SGSVSSPSHSVVISTQNGPPQQTSESLKKEPGAESDRPFIVDENGESKELHPCKYCNKAF
GTHTNMRRHQRRIHERHLMPKGVRRKGMLLQESSSQQHQHEQGQTVSLQEESPSASPPPI
YVPSVETEDEGEREECMVDISNNISENLSHYIDGKIPSTSTVSNCEVIEVDSNTAALFGL
DTLILSPKQIGHALKVETRTCPAKEVSCVTQATQRRRTATPPLLPGVKVEAETASSSSSL
SSPSSQSSLLVGNIFSQSTETLAFPKEKTVYLSPKLKQLLQAPDGQKPAIGLITDSRLTT
PLSVTSLPAVQGKFKRRTASPPTTSQNSPPQRNDNTNSATGVTCSLKVPKMESVTDSWTS
PSKDHGDTESLTGKDWSPSRSGGNSCNQQPLDLSNSFSKRDDSISRGSGEAVLDLSMSRK
SPVDHEVKTGSATLPPHVKRKKPNTSILEKVLMNEYAGLNSPGEEESNTVGSPDAFSSSE
SATCVAPSSPGSGSERLPCESTSPPSLTLMTINPSSPSSSSIASSTPPPPVLPTIPSPPP
LSSKHFPLSDALTPSPFPVLSPKMSPKAVDSLEDVSDSSALTEPCHDALNSIVSESNQTA
EQLDSVNSPLPQDAKRHCTADSSSKSETLLEGSTHDSKPQFLKTADQAGSSHLEWDTSSE
SNQSHSCEGTLPQDLNNKTEVRQKSKSPLSTVQSTPKKESSSPNFLSKLHSPQRSSEADD
NLIIEDVRKKEEMVDITANGADVSPGTSVRSSDEVDSAERETFVKSFVCNVCKEPFRSIK
DLSGHIIEHASEWPFKCEFCVQLFGNATALLEHRSSLHGVGRIYVCSICSKEFAFLCNLQ
QHQSDLHPSQSCTHTAVENGKLRPQNYTNPACANIEKDAVLDSTAGAPSENSSEEHNNDT
NKVEEEEGGHEDPTEELYTTIKIMASEAGKPKGPDVRLGINQHYPSFKPPPFPYHNRSPD
GSVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILVCANASDKRRYTPKKNPI
PLKQVVKQSPNGISPTGPSTGQNAFRRMGQPKRLNFNQDLTSKVKLSALNKKKNQLVQKA
ISQKNKFAASAKKPTARVKEEETREVHACPYCSREFTYPASLTKHIACSCPQRPVAKKLK
KGALTPQDKNRSLRSRATDSEVKQEAVSGSSTPSLGKTRARTSEPVENEAPAANKGKEPQ
VRTKRPSSNVVNAAPQIKKGKKSNEPLTFITPAVTDDSSTRPPSKMQRGFKEVVVKKEVV
DKKEVVVKKEVVNKEVGDKKEAAVKKEVVDKKEAAVKKEVVDKKEAAVKKEVVVKTAQSK
KEERFSARMRERKGGPVTRSVQMTSAPSEVKNEDLLINEPGQSEESLLKLAR
NT seq 5379 nt   +upstreamnt  +downstreamnt
atggctttgcctcaaggagcatatgaaaccctggacgacatcccagcccatgtgtggaag
gggctgccaaacagcatgaagctggagccatcagctgtcaaccccagtcgcattggtgtc
tgggcatctagattaataccaaaaggcaaacgatttggaccatttgtaggagagcgaaag
aagaggtctcaagtgacgagcaatgtttacatgtgggaggtgtattttccagcctggggg
tggatgtgtgtagatgccacagatccaatgaaaggaaactggttgcggtatgtgaactgg
gctcgatcttctcaagagcaaaacctttttccactggagattaatcgagccatttactac
aaagtgttaaggccaatcggcccggacgaagaacttctcgtgtggtacaatggggaagac
aatcctgagatagcagctgcattagaggaagaaaggactagcaacctgaacaagaagagt
tcacctagagcaaagcgagcaaggaggtctctgaaaagcaaggagctgtctgaaaaatcc
aggcagactgatttgggtgggttctgtgaaccgaagaaattgagcgcctctgaaccctca
ataacagagatgcgggactcagaggaagggcttaatggtgaggaaggaccgtcttcacct
tctgagttacaacaggagaatgcagtttcccaggcattgtctacagaaaatgaaaaccct
gtccagtctcatgcaacagagatgaaccggtgggaaggactgaatgaggaaaacacagag
gctgatggacaactgcagcaaccacagttaaatcagagcccacagcacccctctgaggca
gaatcagttgaggggaatgaaaagtctctcctgcaatcacattcaggcagccctgcggaa
gaaagctcagaaagtccactatgtgatacagactgtatatcttctttagcaaaccctgag
ttagaggcagagggggattttgaggatgacccccagggagaaacatacccctgtcagcac
tgcgagcgtcatttctccaccaaacagggcctggagcgtcatactcatattcacactact
tcaaaccatcaaactcatacgtttaagtgccggtactgtgccaagccctttggctctcag
gtaggcaggcgcagacatgaacgtcgacatgagaatgggagtaaaactttaaataggcct
gggtcacttagcggcacatcattcctccccagtcccacagtggctaatgactctgctacc
tctggcagtgtgtcttctccaagccattcagtcgttataagcacacagaatggtccacct
cagcagacctctgagagtttgaaaaaagagcctggtgcagaatctgatcgaccttttata
gtagatgagaatggggagtcaaaagagcttcatccttgcaaatactgtaacaaggctttc
ggcacacacaccaacatgcgcagacaccaacgcagaatccatgagcggcatctaatgcca
aaaggtgttcgacgaaaaggtatgctccttcaggagagttcatcccaacagcatcagcat
gaacaagggcagacagtttcactccaggaagagtcaccaagtgccagtccaccacctatc
tatgtgcccagtgtggagacggaggatgagggagaaagggaggagtgcatggtagatatc
tctaacaatatatctgaaaatctgagccattacatcgatggaaagattccatctacaagt
acagtgagcaactgtgaggtcattgaagttgattcaaacaccgcagcattgtttggtctt
gatactctgattttaagtccaaaacaaattggtcatgctcttaaagttgaaacacggaca
tgtccagcaaaagaagtttcatgcgtaactcaggctactcagagaagacgaactgctaca
ccacctctgctgcctggtgtaaaagtggaggcagaaactgcctcgtcgtcttcctccctg
tcctctccttcctctcagtcctctttgctagtaggaaacattttctcccagtcaactgag
acattagcttttccaaaggagaaaacagtttatctatctccaaaattgaaacaactacta
caagcccctgacggtcagaaaccagccattggtctaattacagacagtagattgaccacc
ccactttcagtaacttcactgcctgctgtccagggtaagtttaaaagaagaactgcctcc
cctcccacaacttcacagaatagcccaccacaaagaaatgacaacacaaactccgcaact
ggggttacgtgttctctgaaggtgccaaagatggaaagcgtgacagattcttggacttcg
cccagcaaagatcatggggacacagagagtttgacaggaaaagactggtctccctcaaga
agtggtgggaattcttgcaatcagcagccgcttgacctttcaaattcctttagtaaacga
gacgatagcataagcagagggtctggagaggctgtgcttgacttaagtatgagccgtaaa
agtcctgttgaccatgaagtaaagacaggctcagcaacactaccgccacatgtaaaaaga
aagaaacccaatactagcattttagagaaagtgttaatgaatgagtatgctgggctaaac
tcacctggagaagaagaatccaacactgttggaagccctgatgctttttcatcatccgag
agtgccacatgtgttgccccttctagtcctgggtcaggatcagaacgccttccttgtgaa
tcaacctctcccccctccctgacccttatgactatcaatccgtcctcgccctcttcatca
agtatagcatcatctaccccacctcctccagtcttacccactatcccatctccgccacct
ttatcatcaaagcattttccgttgtctgacgccttaacaccttccccttttccagtgttg
tcccctaaaatgtcccctaaagctgttgatagtttagaagatgtttcagattcatctgct
ttaacagaaccatgccatgatgcattaaattccattgttagtgaatcaaaccaaactgct
gagcagttagactctgtaaattctcctctgcctcaggatgcaaaaagacattgtacagca
gattcatcttcaaagtcggaaacactacttgagggctcaacccatgattctaagcctcag
tttttaaaaactgcagaccaagcaggttcttctcacctggagtgggatacttcctctgaa
agcaaccaaagccattcctgtgaaggaactctcccccaagaccttaataataaaacagaa
gtcagacaaaaatcaaagtctcccctttctacagtacaatcaactcctaaaaaggaatcc
tcatccccaaactttctcagcaaattgcattcgccacagaggagctcagaggctgatgac
aacttaattatagaggatgtaagaaaaaaagaggagatggtagacataactgcaaatggg
gctgacgtttcacctggaacttcagttagaagttctgatgaggttgactctgcagagcgg
gagacttttgtcaaaagttttgtgtgcaacgtctgtaaagagccattccgctccatcaaa
gaccttagtggtcatataatagagcatgcatcagagtggccttttaagtgtgagttttgc
gtgcagttatttggtaacgccactgctcttctcgaacaccgctcgtctctccacggggtg
ggaagaatttatgtttgctctatttgctcaaaggagtttgccttcctctgcaatcttcag
caacatcaaagtgacctacatccaagtcagagttgcactcacactgccgttgaaaatgga
aagctcagacctcagaactacacaaatccagcttgtgcaaatatagagaaagatgctgtt
cttgactcaactgctggggctccctctgagaattcttctgaggagcataacaatgacact
aacaaggtggaagaagaggaaggtggacatgaagaccctacagaagagctatacactaca
ataaagattatggcatctgaggctggcaagccaaaaggtccagatgtccggcttggcatt
aatcagcactacccaagtttcaagcctccaccttttccttaccacaaccgatccccggat
ggctcagttgcctctgccactaattttaccacacacaatatcccccaaacatttagcact
gcaatccgctgtaccaaatgtggaaacagctttgacaacatgcctgagctacacaaacac
atattagtttgtgctaatgctagtgataagagacgttatacccctaagaagaatcccatt
cctctcaagcaggttgtgaaacaatctcctaatggtatttctccaacaggaccttcaact
gggcagaatgccttccgcagaatgggtcaaccaaaaaggcttaactttaaccaagattta
acatccaaagtcaagttatcagccctaaataagaagaaaaaccagcttgtccagaaagct
atatcacagaagaacaaatttgcagcttctgcaaagaaaccgacagcccgggtaaaggaa
gaggagactcgtgaggtccatgcatgtccatactgtagtcgagagttcacatacccagcc
agtcttacgaaacatattgcttgcagctgcccgcaaagacctgttgccaagaagttgaaa
aaaggtgctctgacacctcaagacaaaaacaggagtctcagaagtcgagctactgactct
gaagtcaaacaagaagcagtttctggatcaagcacaccgtccttgggaaaaaccagagct
cgaacctctgaaccagttgagaatgaagctccagcagcaaataaaggcaaagaacctcag
gtacgtactaagaggccatcctcaaatgtagtcaacgctgccccacaaattaagaaaggc
aaaaaaagcaatgagccattgacttttataactcctgctgttactgatgactcttcaaca
cgaccaccatctaaaatgcaacgtggatttaaagaggtggtggtcaagaaggaggttgtt
gacaagaaagaggtagttgttaaaaaggaagttgtcaacaaggaggttggtgataaaaaa
gaggcagcagtcaagaaggaggttgttgataaaaaagaggcagcagtcaagaaggaggtt
gttgacaaaaaagaggcagctgtcaagaaggaggttgttgtgaaaacggcacaatctaag
aaggaggaacgtttttcagctaggatgcgggagaggaaaggtgggccggtgacacgaagt
gtacagatgacaagtgctccttcagaagtaaagaacgaagacctcttaatcaatgaacca
gggcagtctgaggagtctcttttgaagttagccaggtag

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